Chaetura pelagica (chimney swift): 104397125
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Entry
104397125 CDS
T08631
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104397125 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104397125 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpea00536
]
104397125 (SHH)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C46: hedgehog family
104397125 (SHH)
Glycosaminoglycan binding proteins [BR:
cpea00536
]
Heparan sulfate / Heparin
Morphogens
104397125 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
DUF4238
Alpha_L_fucos
Motif
Other DBs
NCBI-GeneID:
104397125
NCBI-ProteinID:
XP_010005357
LinkDB
All DBs
Position
Unknown
AA seq
251 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQKVRSREGDRALRGRNLP
RAGGFELTHSLPENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLVADAEGRLLY
SDFLAFLDREDDSQKLFYVIEKSKILYFPISPSHCSFISQVNLKAAVAFPSRWCRSLNRG
CLEDGNLGEQH
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagaaagttcgctctcgggaaggggacagggcacttagaggcaggaatttgccc
cgtgcaggtggctttgaactgacacactcactccccgaaaactcggtggcggccaaatca
gggggttgtttccccggctcggccacagtgcacctggagcaaggaggcaccaagctggtg
aaggacctgagtcccggggaccgggtgctggtggctgacgcggagggccggctgctctac
agcgacttcctcgccttcctcgaccgggaggacgattcccagaagctcttctatgtcatc
gagaaaagcaaaattctgtactttcccatctctccatcacattgctccttcatttcacag
gtgaatctgaaggcagcagttgccttcccctcgcggtggtgccggagtttaaaccgtggg
tgcctggaagatggaaatctaggggagcaacactga
DBGET
integrated database retrieval system