Chaetura pelagica (chimney swift): 104398405
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Entry
104398405 CDS
T08631
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104398405 (DHX57)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104398405 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
DEAD
HA2_C
HA2_N
zf-CCCH_4
Torus
zf-CCCH
UBA
nSTAND3
zf_CCCH_4
AAA_22
AAA_19
T2SSE
zf-CCCH_2
NB-ARC
Viral_helicase1
AAA_14
Motif
Other DBs
NCBI-GeneID:
104398405
NCBI-ProteinID:
XP_010006818
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MSSAVRKRGKPNRGGGRGRGGGGGRGRGGSGRGGSSSGRSNKSQLGGNRKCATKIWDDGD
DFCLFEEPRLESRSNASARRGGQAKQRPEARMPLQTIHMTSENQRRVKELLQELQAQDLA
PESEVAGSDEDEDEPDYLDDEQCWSTDQEVSDVIPRLPAEQRIVENEVSSFAVHKLSRYG
FDSERCRAVLRSCNGNIGASLEYLLLQCFAERYGEKMQVSATAAEASQEEYLEQRQEEAF
ALRAIYGEKFVERIQNRVWTFGLELQYLANGLSKSKQKDSCTREAAKQTSKEICKFHLQG
GCRFGSKCRFKHEFPPNHPIKPARNSVDDTHLRLNSDRPVYELEVRFPEENKYPLQAPLV
AFYSTDENLPLACRLHIAELLFGKALAAAESNEPVVYTLVTCLEDESEIRELLKNTHHKY
SVPPVSLLATPSVKLQTKSASSSSQVSEASIVSEPQEEEEEAGEEEEDEPEQVVVENESY
VNFRKKLSKKYDVQAKSLYNENVKICTRFRLKKSSRHFQSMLYERQKLPAWQERETILDL
LRSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPSGVANIICTQPRRISAISVAERVAKE
RTERIGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDMTLQGITHVIVDEVHERTEE
SDFLLLVLKDVMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVI
AMTRYVLEDSSPYRRKTKQENKQNGRHKRTAFEEVEEDLRRAGILEGTDTVVRDSDPDQK
LTLKQLLARYKGVDKAVLKTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPGL
AEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPVGVIKIIISTNIAE
TSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCFHLF
SSHHYNNHLIKQQLPEIQRVPLEQLCLRIKMLEMFSAQSLHFVLSRLIEPPRTESLRASK
LRLQDLGALSADEELTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPF
VSPWDKREEANKKKLEFAIGNSDYLALLQAYKGWRLSIKEGSQASYNYCKENFLSGRVLQ
EIASLKRQFTELLSDIGFVKDGLRARDIERKWSQGGDGVLDATGEEANSNAENIKLISAM
LCAALYPNVVQVKKPEGKYQKTSAGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHF
ESPYLVYHEKIKTSRVFIRDCSMVSVYPLVLLGGGQVHMQLQKGECVISLDDGWIQFVAA
SHQVAELVKELRCELDQLLQDKIKNPSMDLCMCPRGSRIIAMIVKLVTTQ
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcagtgagaaaaagaggaaagcccaacagaggaggaggaagaggaagagga
ggaggaggaggaagagggagaggaggcagtggaagaggaggaagcagcagtggccgttca
aacaagtctcaacttggtggaaataggaagtgtgcaaccaaaatttgggatgatggagat
gatttttgtctcttcgaggaaccaaggctggaatccagatcaaatgcctctgctagaaga
ggagggcaagcaaaacagagacctgaagcgagaatgcctctgcagaccatacacatgaca
tcagagaatcagagaagagtgaaggaacttcttcaagagcttcaagcgcaggacctggct
cctgaatcagaagtagctggttctgatgaagatgaggatgaacctgattaccttgatgat
gaacagtgctggtcaacagatcaagaagtttctgacgtaataccaaggttgcctgctgag
cagagaattgtggaaaatgaagtgtcttcatttgctgtacacaaactctccaggtatggt
tttgacagtgagcgttgtcgggcagtcctgagatcctgcaatggtaatattggggcatcg
ttggagtatttgctgttgcagtgctttgctgaaagatatggagagaagatgcaggtttct
gcaacagctgctgaagccagtcaagaagaatatttggaacagagacaagaagaggctttt
gccctccgggcaatctatggagaaaaatttgtagaaagaattcaaaaccgcgtttggact
tttggtttggaattgcagtacctggcaaacgggctcagcaaatctaaacaaaaggacagt
tgtactagggaagcagctaagcagacttcaaaggaaatatgtaaatttcatctccaagga
ggctgcagatttggttcaaaatgcagattcaaacatgaattccctccaaaccacccaata
aaaccagccaggaactctgtagatgatactcatctgagacttaacagtgatcgtcctgta
tatgaacttgaagtaagatttcctgaagaaaacaagtatccactccaagcacctcttgtg
gcattttactccactgacgagaatctacctcttgcttgtcgtttacacattgctgaatta
ctctttggaaaggccttagcagctgcagaatctaatgaaccagtggtgtacaccttagtg
acttgcttagaagacgaatctgaaataagggagttacttaaaaatactcatcacaagtac
agtgttcctcctgtgtccctgctggcaacaccatctgtaaagctacaaacaaagagtgca
tctagctcaagtcaagtgtctgaagcctcaatagtgtcagagcctcaggaagaagaggag
gaggcaggagaggaggaagaagatgagcctgaacaagttgtcgtggagaatgagagttat
gtgaacttcaggaaaaagctttccaaaaagtatgatgtgcaggcaaagtctctgtataac
gaaaatgttaaaatctgcacgcgatttcgtctgaaaaagtcttctaggcacttccagtct
atgttgtatgaaagacagaagctccctgcgtggcaagagagagaaaccattcttgattta
ctgaggagccaccaagttcttgttgtgagcggcatgacaggatgtgggaaaaccactcag
attcctcagtttattttggatgcctcattgcaaggatctccaagcggagttgcaaacatc
atctgcacgcagcctcgcaggatctctgccatttctgtggctgaacgtgtagccaaagaa
aggacagaaaggattggactcactgttgggtatcagatccgtctagaaagtgtaaagtcc
tcagctaccaggctcttgtactgcactactggtgtgctgttgagaagactggaaggagat
atgactttgcagggaatcacacatgttattgttgatgaagttcacgaaagaacagaagaa
agtgacttcttgctgctggttttgaaggatgtaatggttcagaggccagatctgcgcatt
atactcatgagtgccaccttgaatgcagagcttttttctcaatattttcactcctgtcca
attattaacataccaggtcgaacatttcctgtggatcagttttttctggaagatgtgatt
gcaatgacaaggtatgttttagaggacagtagtccctacaggcgcaagacaaagcaagaa
aacaaacagaatggaagacacaaaagaactgcatttgaagaagtagaggaggacctgaga
cgtgctggcattctggaaggcactgacacagttgtcagagattcagacccagaccaaaaa
ttaaccctgaagcagctccttgcacgatataaaggggttgacaaggcagtgttgaaaact
atgtcagtcatggacttggacaaagttaatctggaattaattgaagccttgctagagtgg
atagttgctggcagacattcataccccccaggtgctgtgttgatatttttgcctggtcta
gcagaaatcaagatgctttatgagcagctccagtctaatgctctttttaataacaggcat
agcaagaggtgtgttgtttatccgcttcattcttcactgtcaagtgaagaacagcagtct
gtgttcctcaggcctcccgttggagttatcaaaatcatcatctctacaaatattgcagaa
acatctgtcactattgatgatgtggtctatgtgattgattctggaaaaatgaaagagaaa
agatacgacccaagcaaaggaatggaaagtctggaagatacatttgtgtccaaggccaat
gctctgcaaaggaaagggcgagcaggccgtgtagcctcaggtgtctgctttcatcttttc
agtagccatcactataacaatcatcttattaaacagcagttaccagaaatacaaagagta
cccttggagcagctttgtctaaggattaagatgctggagatgttttctgcacagagcctt
cactttgtcttatcacggctgattgagccccctagaactgagtcgttgcgggcatcaaag
ctgcgacttcaagacttgggagcattatctgcagatgaagagctcacccctctgggatat
cacttggcttctctgcctgttgatgtcaggattggcaagctaatgctgtttggcaccatc
tttcgctgtctggatcctgcactaactatagcagccagtctggcctttaagtcacctttt
gtgtcaccatgggataaaagggaagaagcaaacaaaaagaagttggagtttgcaatagga
aacagcgactatctggctcttctccaggcctataagggatggcgtttaagtatcaaagag
ggctcccaagccagctacaactactgcaaggagaactttctgtcaggaagagttcttcag
gaaattgccagtctgaaacggcaattcacagagctgctttctgatattgggtttgtgaag
gatggattaagagccagagacattgaaaggaagtggtcccaaggaggcgatggcgtgttg
gatgccacaggagaagaggcaaattcgaatgcagagaacatcaaactgatctcagctatg
ttgtgtgctgcactgtatcccaatgttgtccaggtgaaaaagccagagggcaaataccag
aagaccagtgcaggagcagtcaaaatgcaaccaaaagcagaagagctgaagtttgttacc
aaaaatgatggttatgttcacattcacccttcctctgtgaattatcagactaggcacttt
gagagcccctacctggtgtatcatgagaaaatcaagacgagccgcgtgttcattcgggac
tgcagcatggtgtcagtctaccccctggtcctgcttggaggtgggcaggtccacatgcag
ctgcagaagggagaatgtgtcatttctcttgatgatggatggatccagtttgttgctgcc
tctcaccaggtggctgagctggtgaaggagctacgctgtgaactagaccagctgctgcag
gataaaatcaagaatcccagtatggatttatgcatgtgcccccgtggatctcggatcatc
gctatgattgtaaagcttgtgactacacagtaa
DBGET
integrated database retrieval system
