Chaetura pelagica (chimney swift): 104398819
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Entry
104398819 CDS
T08631
Symbol
SPATA5
Name
(RefSeq) spermatogenesis-associated protein 5
KO
K14575
AAA family ATPase
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104398819 (SPATA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpea03009
]
104398819 (SPATA5)
Ribosome biogenesis [BR:
cpea03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104398819 (SPATA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_16
AAA_22
IstB_IS21
AAA_28
Mg_chelatase
Parvo_NS1
RNA_helicase
nSTAND3
AAA_33
AAA_14
AAA_25
AAA_2
AAA_7
Rad17
Sigma54_activ_2
AAA_3
AAA_18
AAA_17
TsaE
ATPase
DUF815
bpMoxR
Sigma54_activat
AAA_24
NACHT
CDC48_N
AAA_19
NB-ARC
AAA_6
DUF5906
Bac_DnaA
AAA_30
CDC48_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
104398819
NCBI-ProteinID:
XP_010007276
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MKAAGLCIGRPALLTSAGGRQEVCTAWPTTGFPGGKIGLTETTQKNLKVSPGDAITVQPV
TGAVIQAEEVDVKLRDRDATINAEEMSVCLLRNLDGKIVLPGNLLAFTFYGKLCNIVVMK
VKGTDGAELTAQGSAISSDVHEPDLERSDLETSTLDLSLQLSKMDIDDSPVVASMSTPSK
LMDPGSPVTPSSALAASGQESGQEGKVNGKGDSADLTSASELAGKGGSEELLLTGNAGAI
SNTDVFYFISSRTRINFIESRTSVAEDGDCESRVTYDMIGGLSSQLKTIRETVELPLKQA
ELFKNYGIPPPRGVLLYGPPGTGKTMIAKAIANEVGAHVTVINGPEIISKFYGESESRLR
QIFAEASLCRPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEESEGQLLVL
GATNRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVPHSLTAAELVQLADSA
HGYVGADLAALCKEAGLYALRRALGKRPNLLDNEVAGSVMIAFNDFLQGMKDVRPSAMRE
VAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTM
IAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARAVAPSVLFFDEIDALAVER
GNSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDMIDKALLRPGRIDRIIYVPL
PDAATRGEIFKLHFQSMPVSDDVCLAELVQHTQKYSGAEITAVCREAALLALQEDIHAKR
ILGRHFQCALTIVTPRIPDSLIQFYADYQQQSGLHAL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgcggggctgtgcatcgggcgcccggcgctgctcacctcggccggggggcgg
caggaggtctgtaccgcttggcccaccactggttttccaggtgggaaaattgggctgact
gaaaccacccagaagaacctgaaagtaagtccaggtgatgccatcactgtgcagcccgtg
actggtgcagtcatccaggcagaggaagtcgacgtgaagttgagggacagagatgccacc
attaatgctgaggaaatgtctgtctgtctactgagaaacctagatgggaaaatagtttta
ccaggaaacctcttggctttcactttctatggcaaactttgtaacatcgtggtgatgaaa
gtgaaaggaactgatggtgcagagctgactgcccagggcagtgccatttccagtgatgtg
catgagccagacctggaaagatcagatctggagacaagtacattagatttatcgctacag
ctcagcaagatggacattgatgacagtccagtggttgcatctatgagcacaccaagcaaa
ctgatggatcctggttcaccagttacacccagttctgctttggcagccagtggtcaagaa
tctggtcaggaaggcaaagtcaacggcaagggagatagtgcagacctcaccagtgcatca
gagttggctgggaaaggaggcagtgaggaactcctactaactggcaatgctggagcaata
agcaatacagatgttttttattttatttcatcaagaactagaatcaattttattgaatca
aggaccagtgttgcagaagatggtgattgtgaatcccgagtcacctatgatatgatagga
ggtttaagcagccagctcaaaactattagagaaacagttgaactgcccttgaagcaagct
gaactgttcaagaattacggaatccctcctcctagaggagtgctgttatatggccctcca
ggtaccgggaagacgatgattgccaaagccattgcaaacgaggttggcgctcacgttact
gttattaatggtcctgaaataataagcaagttttatggggagtctgaatcaagattgcgt
cagatatttgctgaagcttctctgtgtcgcccctccattatatttatagatgagttggat
gcactctgtccaaagagagaaggggctcaaaatgaagttgaaaagagggttgttgcttca
ctgctgacgttaatggatggcattggctcagaagagagtgaagggcagctcttggtactt
ggggccactaatcgtcctcatgctctggatgccgcgctgcgcagacctgggcgtttcgat
aaagagatagaaattggaattcctaatgcccaagaccgtctggacatactccagaagctt
ctcaagaaagttccccattcgctcacagcagcagagttggtgcaactggctgatagtgca
catggttatgtgggtgcagacttagcagccttgtgcaaggaagcaggcctgtatgcattg
cggagagcactggggaaaagacctaacctattggacaacgaggtggctgggtcagtgatg
attgctttcaatgacttcctgcaggggatgaaggatgtcaggcccagcgccatgagggag
gtggcagttgatgtgccaaaagtatcttggtcagacataggagggctagaagatgtcaag
ctgaaattgaagcaagcagttgaatggcctctcaagcatcccgactccttcatccgaatg
gggattcagcctccaaaaggggtgctgctttacggacctcctggctgctcaaaaacaatg
atagcgaaagctttggctcatgaaagtggtctcaacttcttggcagtaaagggacctgag
ctgatgaataaatatgttggtgaatctgaacgagcagtgagagagatctttaggaaagcc
agagcggtggctccttcagttcttttctttgatgaaatagacgctttggcagttgaaagg
ggaaactcttcaggtgctggaaatgtagcagaccgtgtcttggctcagttgttaacggaa
atggatgggatagaacagctgaaggacgtgacaattttggcagcaacaaacagaccggac
atgatagacaaggccttgctgagaccaggacgaatagacagaattatctatgtgccgcta
ccagacgcagccactcgtggggagatcttcaagcttcatttccagtccatgcctgtcagc
gatgatgtctgcctagcagagctcgtccagcacacacagaaatactcaggagcagagata
acagcagtctgtagggaagcagcccttctagctcttcaggaggacatccatgccaaacgt
atcctgggacggcactttcagtgcgcactgactatcgtgaccccaaggattccagattcc
ttaatccagttttatgcagattatcagcagcaaagtggactgcatgcactttga
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