Chlamydia pecorum PV3056/3: CPE1_0921
Help
Entry
CPE1_0921 CDS
T02854
Symbol
uvrB
Name
(GenBank) excinuclease ABC, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cpeo
Chlamydia pecorum PV3056/3
Pathway
cpeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPE1_0921 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpeo03400
]
CPE1_0921 (uvrB)
DNA repair and recombination proteins [BR:
cpeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPE1_0921 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPE1_0921 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
UvrB_inter
UvrB
ResIII
DEAD
UVR
AAA_22
AAA_30
AAA_19
Endonuc-dimeris
Motif
Other DBs
NCBI-ProteinID:
AGW38389
LinkDB
All DBs
Position
1050793..1052757
Genome browser
AA seq
654 aa
AA seq
DB search
MTFHLHAPFQPCGDQPEAIAKLCSGLKENVRAQVLLGATGSGKTFTIANVIAQANLPTLV
LAHNKTLAAQLYQEFREFFPENAVEYFISYYDYYQPEAYIARSDTYIEKSLLINDEIDKL
RLSATRSILERRDTLIVSSVSCIYGIGSPENYLSMTLELQVGKAYPRDLLTSQLAKMHYQ
ASPLPQRSAFRELGSVLDVFPAYENQALRLEFANDTLVSIDICDPLTMLPQSSTTQTILY
PGSHYVTPEAIREYAVRSIREELEERLKFFETRPVEQERLFQRTTHDIEMIKEIGFCKGI
ENYSRHFTGAPPGAPPACLLDYFPEEFLLIVDESHQTLPQIRAMYRGDRSRKEALVEYGF
RLPSAFDNRPLTYEEAQKYFRKVIYVSATPGDTELKESQGHIVEQILRPTGIPDPLPEIR
PATGQVDDLLEEIRVRLAKTHEKILVISLTKKLAEEIAVFLNELEIPAAYLHADIETAER
THILADLRTGKIDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSTSSLIQFCGRAARN
VHGKVIFYADKKTPAIEATLKEAARRRQIQIAYNKKHNLTPRPIIKAVFSNPIPQGTKKD
PFPQEQELSQEELEKLIKKNEKLMLLAAEEFRFEDAAKYRDLIHSYKKRLLELS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcaccttcatgctccttttcaaccatgtggagaccaacctgaagccattgca
aagctatgctctgggttaaaggagaatgttcgtgctcaagtgcttctaggagcaacaggt
tcagggaaaacatttaccatagcgaatgtgattgcccaagcaaacctccctacactggta
ttagcccataataagacactagcagctcagctctatcaagagttccgggagttctttcct
gagaatgctgtcgaatacttcatttcgtattatgactattatcagcctgaggcgtatatt
gcccgtagtgacacctatatagaaaaaagcttattaatcaatgatgagattgataagttg
cgcttatctgcaacacgttcaattttagagcgtcgtgacaccttaatagtctcttctgtt
tcctgtatttatggtataggctctcccgaaaattatctttctatgacgttagaattacag
gtcggaaaggcataccctagggatcttcttacctcacaattagcgaaaatgcattatcaa
gcctctcctcttccccagcgcagtgcttttcgagaactcggaagtgtactagatgttttc
cctgcctatgaaaatcaagctcttcggctagagtttgctaacgatactctagtctctatc
gatatttgtgatcccctgacaatgctccctcagagctcaacgacacaaacaatactttac
cccggatcacattatgttacacccgaagcaattcgagaatatgctgtacgctctatccga
gaagaactggaagagcgcctgaagtttttcgaaacacgccctgtagaacaagaacggtta
tttcaaagaaccacgcatgatatcgaaatgatcaaggaaattggcttttgtaaagggatc
gaaaattactctcgtcatttcacgggagctccccccggagcaccgccagcatgcctgctg
gattatttccctgaggagtttttactcatagtggatgagtcccaccaaacacttccacaa
atacgtgcaatgtatagaggagatagatctcgaaaagaagccttggtagaatatggtttt
cgtttgccttccgcatttgataaccgtccccttacctatgaagaagctcagaaatacttc
cgcaaagtgatctatgtttctgcaactcctggagacacagagctcaaagaaagccaaggg
catattgttgaacaaattcttcgtcctacagggatcccagatccccttccggaaattcgt
cctgctacagggcaagttgatgacctcctagaggaaatccgcgtaagattagcaaaaaca
catgagaaaatcttagtaatctccctaacaaaaaagcttgcagaagagatcgcagtgttt
ctcaatgagctagagattcccgcagcctacctccatgcagatatagaaactgccgagcgt
acccacatcttggccgatctacgcacagggaaaatcgacgtgctcattggagtcaacctc
cttcgtgaagggctggatcttcctgaagtatctttagttgccattttagatgcagacaag
gaaggctttttgcgcagcacttcctcactcattcagttttgtggcagagctgcaaggaac
gttcatgggaaagtaattttctacgcagataaaaaaactcctgctatcgaagcgactctg
aaagaagctgcccgccgcaggcagatccaaattgcgtacaacaaaaaacataaccttacc
ccccgccccatcatcaaagcagtcttttccaatcctattcctcaaggaacaaaaaaagat
ccttttccccaagaacaagagctctcccaagaggagctagagaaactcattaagaaaaat
gaaaagctcatgcttcttgctgctgaagagtttcgtttcgaagatgcagcaaaataccgt
gatctaatccactcatacaaaaagcgacttctagagctctcctaa
DBGET
integrated database retrieval system
