Cucurbita pepo subsp. pepo (vegetable marrow): 111780436
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Entry
111780436 CDS
T05351
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like
KO
K12194
charged multivesicular body protein 4A/B
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03250
Viral life cycle - HIV-1
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111780436
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111780436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111780436
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111780436
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
111780436
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111780436
Exosomal proteins of other body fluids (saliva and urine)
111780436
Exosomal proteins of colorectal cancer cells
111780436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF6437
TraF_2
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
111780436
NCBI-ProteinID:
XP_023516619
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All DBs
Position
LG18:complement(5123122..5126243)
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AA seq
220 aa
AA seq
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MSMFNKLFGKPKQESNALATLDKLNETLEMLEKKENVLLKKAATEVEKAKDYTRAKNKRA
AIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATN
IDDVDKTMDEINEQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPA
TTAPVASIPVPAGRQTARPAPQKRTAEEDELAALQAEMAL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgttcaataagctttttggtaaacctaaacaggagtctaatgctctggcgacg
cttgataaattaaacgagacactggaaatgctggagaagaaggagaacgtgcttctgaaa
aaggctgccacagaggttgagaaggccaaagattataccagagcaaagaacaagcgggct
gctatacaatgtttgaagaggaagagactatacgaacaacagatagagcagctcggcaac
ttccaattgcggattcacgatcagatgatattattagaaggagcaaaagccacaaccgag
acggtagatgccttgaggaccggtgcagctgcaatgaaagcaatgcagaaagcaacgaac
atcgatgatgtggataaaacaatggatgagatcaatgaacaaactgagaacatgaaacag
atccaagaagcactatcaaatccaattggtgctgcagccgattttgatgaggatgaactg
gaagctgaacttgaagagctagaaggtgctgagttggaagagcaactccttcaacctgca
acaactgctcctgttgcttcaattcctgtccctgctggccgacaaaccgctcgacctgct
cctcagaaacgaactgccgaggaagatgagctggcagctctgcaagctgagatggcactt
tga
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