Cucurbita pepo subsp. pepo (vegetable marrow): 111789075
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Entry
111789075 CDS
T05351
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111789075
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111789075
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111789075
03036 Chromosome and associated proteins [BR:
cpep03036
]
111789075
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111789075
Peptidases and inhibitors [BR:
cpep01002
]
Metallo peptidases
Family M67
111789075
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111789075
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111789075
BRISC complex
111789075
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
111789075
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
111789075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
111789075
NCBI-ProteinID:
XP_023525485
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All DBs
Position
LG02:complement(13785816..13790961)
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AA seq
435 aa
AA seq
DB search
MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
KDRVETHPEQLAAASAQADRMTTMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPMYRNSVIDVESSLSSS
DNLSAKVGGPGESPEQDTGDSMVAGAMKGSGRSSELGYFFANADTNYQGKEKMGGSYLTS
NTNSGTTDIDPMDLTESMQEAMHRSNIEMSAAEFSRKEIPLHVMPSASLIKLDSPLMSFT
DLQNVLFEEERSAYNQAILNNMKDGKAHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD
RLKENEIRLALLAEEARNLELEAGKSNESVPGSPHQVTHGSRASASTTHRDSYASTASVG
ARTAGSSVHRSRKGL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacggccgtgaagatgtccgaagacgtttggtttacttgtctcactcatgca
ttgtccaccgagactgaagaaatcatggggcttcttcttggcgatattgagcattcaaaa
aatggaagtgttactgcactaatttggggagcatcgcctcagacacggtctgacagaagg
aaggaccgtgtggagactcatcctgaacaattggctgctgcatctgcccaggctgataga
atgacaacaatgactgggagaacaacaagagttattggatggtaccattcacatcctcat
ataacagtgcttccttctcatgttgatgtgcgaactcaagggacatatcagctccttgat
tctgggtttattgggctgatattttcctgctttagtgaagatgcaaacaaggttggaaga
attcaagttattgctttccagtcctctgatggaaaacagaatcacctctcaagacctatt
tccttatctcctatgtatcgaaattcagtgattgatgttgaatcttctttgagttcctct
gataatttatcagcaaaagtgggcggaccaggggagagtcccgaacaagacactggtgat
tcaatggttgctggagctatgaagggttctggacgatcttcagagttgggttatttcttt
gctaatgctgacaccaactaccaaggaaaagaaaaaatggggggtagctatcttactagc
aatacgaacagtggtactactgatatcgatcctatggacttgactgaaagtatgcaagaa
gcaatgcaccgttcaaatatcgaaatgagtgctgctgaattctcaaggaaagagattcct
ctgcatgtgatgccgagtgcttccctcataaagcttgattcaccattaatgtcttttaca
gatttacaaaatgttctgtttgaagaggagagatcagcttataaccaagccatcttaaat
aatatgaaggatgggaaagcgcatccgctgacgttcatacatcacacctcaacatatcag
gcttcaatgtgcaagttaattgaatattgtcttagtcctgccataagtgcactccaggac
cgtttaaaagagaacgaaattcggttagcattgctggctgaggaagccaggaatctggaa
cttgaggctggaaaatcaaacgagtcagtcccgggatcacctcaccaagttacgcatgga
tctcgagcaagcgcttcgacaacacacagggactcgtatgcttcaactgcatcagtcggt
gcacgaaccgcaggaagctctgttcaccgaagtagaaaggggttgtga
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