Cucurbita pepo subsp. pepo (vegetable marrow): 111789744
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Entry
111789744 CDS
T05351
Name
(RefSeq) ABC transporter B family member 1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111789744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111789744
04147 Exosome [BR:
cpep04147
]
111789744
04090 CD molecules [BR:
cpep04090
]
111789744
Enzymes [BR:
cpep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111789744
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111789744
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111789744
CD molecules [BR:
cpep04090
]
Proteins
111789744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_29
RsgA_GTPase
nSTAND1
AAA_15
AAA_5
AAA_21
AAA_25
DUF815
Rad17
Motif
Other DBs
NCBI-GeneID:
111789744
NCBI-ProteinID:
XP_023526194
LinkDB
All DBs
Position
LG03:complement(970330..976153)
Genome browser
AA seq
1354 aa
AA seq
DB search
MSQDSEEIKTTEKWKWSEMQGLELLSSDPPPPKPSPPTPKHTDPEDLSSKEEEAEHGIGR
PINGEMESSTDSKKENGGGTSGEKPEAVSSVGFGELFRFADGLDYVLMAIGSVGALVHGC
SLPLFLRFFADLVNSFGSYANDVDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGE
RQSTKMRIKYLEAALDQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATF
VSGFVVGFTAVWQLALVTLAVVPLIAVIGGIYTTTIAKLSAKSQEALSEAGNIVEQTIVQ
IRVVLGFVGESRALQRYSSALKISQKIGYKTGFSKGMGLGATYFVVFCCYALLLWYGGYL
VRHHATNGGLAIATMFAVMIGGLALGQSAPSMSSFAKARVAAAKIYRIIDHKPTLNSNNE
SGLELESVSGLVELKNVDFSYPSRPDVRILNNFSLTVPAGKTIALVGSSGSGKSTVISLI
ERFYDPISGEVLLDGRDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADQVEV
EEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSA
LDSESEKLVQEALDRFMIGRTTLLIAHRLSTIRKADLVAVIQQGSVSEIGTHDELIAKGE
NGVYAKLIRMQEMAHETALNNARKSSARASSARNSVSSPIIARNSSYGRSPYSRRLSDFS
TSDFSLSLDSSLPNYRLEKLAFKEQASSFWRLVKMNSPEWLYALLGSVGSVVCGFLSAFF
AYVLSAVLSVYYNPDHAFMSREIIKYCYLLIGLSSAALLFNTIQHFFWDIVGENLTKRVR
EKMLTAVLKNEMAWFDQEENESAKIAARLALDANNVRSAIGDRISVIVQNTSLMLVACTA
GFVLQWRLSLVLVAVFPVVVAATVLQKMFMTGFSGDLEANHAKATQLAGEAIANVRTVAA
FNSEEKIVRLFSTNLEIPLRRCFWKGQIAGSGFGVAQFSLYASYALGLWYASWLVKHGLS
DFSKAIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFALLDRKTEIEPDDPDATPVP
DKLRGEVEFKHVDFSYPTRPDIPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE
PTSGRVMIDGKDIRKFNLKSLRKHIAMVPQEPCLFAASIYDNIAYGHESASEAEIIEAAT
LANAHKFISALPEGYKTFVGERGVQLSGGQKQRIAIARALVRKTELMLLDEATSALDAES
ERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGSHSHLLKNYPDGCYA
RMVQLQRFTHSQVIGMTSGSTSSAKTREDEDRES
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggagattaagacgactgagaagtggaaatggtccgaaatgcaa
ggccttgagctcctctcttctgatcctcctcctcctaaaccatcacccccaacaccgaaa
cacacagaccccgaagacctcagctccaaagaggaggaggctgaacacggaattggcaga
cccataaacggagaaatggaatcttcaactgattccaagaaggaaaacggcggtggcacc
agtggggagaaacctgaagccgtcagttctgttgggtttggggagcttttcagattcgcg
gatgggttggattacgttttgatggcaattgggtcggtcggagcccttgtccacggttgt
tctttgcctctgtttctccgtttcttcgctgatcttgttaactcttttgggtcttacgcc
aatgatgtggataaaatgatgcaggaggttttgaagtacgcattttacttcctcgtggtt
ggagctgcgatatgggcgtcatcctgggcagagatttcatgttggatgtggaccggcgag
cggcagtccacaaagatgaggatcaagtacctagaagccgcactggaccaagacattcag
tattttgatacagaggtgcgaacatctgacgtcgttttcgccatcaacacggatgcagtg
atggtccaagacgccattagtgagaagctgggcaacttcatccactatatggcaacattt
gtgtccggattcgttgtgggtttcactgctgtgtggcaattggcgttggtaactcttgcg
gtggttcctttgattgccgtaatcggcggcatctacaccaccacaatagccaagctctct
gccaagtcccaggaagctctttcagaggctggaaatatcgttgaacagacaatagttcaa
atccgagttgttttggggttcgtgggcgaatcaagagcgttgcagagatactcctccgcg
ttgaagatttctcagaagataggttacaagactggattctccaagggtatgggattgggc
gccacttactttgttgttttctgctgttacgctcttctgctctggtacggaggttatctc
gtcagacaccacgccaccaatggcggtctggccatagccactatgtttgccgtgatgatt
ggcggactggcattgggacaatctgctccgagcatgagttcgttcgcaaaggctagagtt
gcagctgccaaaatctatcgtataatcgatcacaagcccactctaaacagcaacaacgaa
tctggtttggaattagagtcagtttcaggactggttgagctgaagaatgtggatttctca
tacccatcaaggccagatgtaagaatcctgaacaacttctctctaactgtccctgccgga
aaaactatagctctggtcggtagcagcggctcgggcaagagcaccgtcatctccctaatt
gaaagattctatgaccccatttcaggagaagttttactagatgggcgtgacataaaaact
ttgaagctgagatggttaaggcagcagataggactggtgagccaagaacctgcacttttt
gccaccaccatcaaggagaatattctcttgggcagacctgatgcagaccaagttgaggtg
gaggaagctgctcgagtcgccaatgctcattcattcattatcaaacttcctgaaggctat
gacacccaggtaggggaaagaggactgcagctttctggagggcagaagcagaggattgca
atagcaagggcaatgctgaaaaaccctgcgatcctactcttagacgaggctactagtgca
ttggattctgagtcagaaaagcttgtacaggaggctcttgatcgttttatgatcgggcgg
acgactcttcttattgcccatcggctctctaccattcgtaaggctgaccttgtggctgta
atccaacagggaagtgtttctgaaattggaacacatgacgagctcattgccaaaggagag
aatggtgtatacgccaagcttatccggatgcaggagatggcacatgaaactgctctcaat
aatgccagaaagagtagtgcaagggcttcaagtgccaggaactcagtgagttccccaatc
attgcacggaattcttcctatggacgatcgccttattcacgtcggttatctgacttttcc
acatctgattttagtctttctctggattcttcacttcccaattacaggcttgaaaaactt
gcctttaaggagcaagccagttccttctggcgtcttgtgaaaatgaattcacccgaatgg
ctttatgcattacttggttctgttggttctgttgtctgtgggtttctaagcgccttcttt
gcatatgttctgagtgctgttctcagtgtctattacaacccagaccatgctttcatgagc
agagaaattattaagtactgctacttattaatcggactttcgtcagctgctcttctcttc
aatacaatacagcatttcttctgggatattgtgggagagaacctcaccaaacgtgtgaga
gaaaagatgctgacagcagtactgaaaaacgaaatggcatggtttgaccaggaagaaaat
gaaagtgcaaaaattgctgctaggctggcccttgacgctaacaacgttagatcagctatt
ggagacaggatttctgtgattgtacagaacacgtcactcatgctagttgcatgcacagct
gggttcgttttgcagtggcgcctatcccttgtccttgtagccgtcttccccgtggttgtt
gcggccactgttctacagaaaatgttcatgactggtttttcaggagaccttgaggctaac
catgccaaggccacacaacttgcaggggaagccatagccaatgtaaggacagttgctgca
ttcaattcagaggaaaagattgtcagacttttctcaaccaacctcgagatcccactacgc
cgctgcttttggaagggacagattgctggcagcggctttggcgttgctcagttctctctt
tacgcttcctatgctcttggtctttggtatgcatcatggcttgtcaagcatgggctctct
gatttttcgaaggcaatccgtgttttcatggtccttatggtttctgcaaatggcgcagct
gaaacactcactctagctcctgactttattaagggtggtcgagccatgcgatccgtcttt
gcacttcttgaccgcaaaactgaaattgaacctgatgatccagatgccactccagtccca
gataaacttcgtggagaagttgaatttaaacatgttgacttttcctacccaactcgccct
gatatccctgtctttagagatcttagtttgcgtgcccgagcaggtaagactcttgctctt
gttggcccgagtgggtgtggcaagagctctgttattgcactagtccaaagattctatgag
ccaacttcaggacgagttatgattgatggaaaagatattcgtaagttcaacctcaagtct
ctgagaaagcacattgccatggtccctcaggaaccatgcttgtttgctgcttccatatat
gataatatagcttatggccacgaatcagcctctgaagctgagatcattgaagccgctact
ttggcaaatgcccacaagttcatatctgcattgccagaaggatataaaacttttgttggg
gagaggggagttcaactatcgggtggacagaaacaaagaattgcaattgctcgtgctctg
gtcaggaagacagagcttatgctactagatgaggcaacaagtgcacttgatgctgagtct
gagcggtccgtccaggaggcgctcgaccgagcttgttcaggtaaaacaacaattgtagtt
gctcatcgactatcaactatcaggaatgcccatgtcattgcagtaattgatgatggtaaa
gtttcagagcagggatcacactcacatttgttgaaaaattatcctgatgggtgttacgcc
cggatggtacaattacaaagattcacacacagccaagtcattggcatgacttcaggttca
acttcctcagcaaaaactagagaggatgaggacagagagagctag
DBGET
integrated database retrieval system
