Cucurbita pepo subsp. pepo (vegetable marrow): 111790436
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Entry
111790436 CDS
T05351
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111790436
Membrane trafficking [BR:
cpep04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
111790436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
111790436
NCBI-ProteinID:
XP_023527090
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Position
LG03:1637635..1658759
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AA seq
1285 aa
AA seq
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MDPANTPLGRMLLEEITPVIMVLNTPLVEEACLKNGLSFIQMLSPFCSFNNIDVPVRTAS
DQPYRIKKFSSRLFYGSDIHQPNFEASKERLKQVITQASEKDLSKLCSDPPQINEAVDCF
ESAILPSWFQLFNKELIRNVSFSEHEAFDHPVACLLVVSSSDDHPVNKFVDLFNTIKLAS
LLDDGATDPKIMKHYLLLHDNQDGSSEKASKILTEMRSAFGSNDCQLLSINSSHDELIER
EDDPWGLFKPDASIGKQLGCFLSNEDLIEIRELMQDFSSKHIIPYMEQKIRALNQQVSAT
RKGFRNQIKNLWWRKGKEDTVDSPTGPTYTYNSIESQIRVLGDYAFMLRDYELALSNYRL
ISTDYKLDKAWKRYAGVQEMMGLTYFLLDQSRKEAEYCMENALNTYLKMGPSGHLNATRC
GLWSAEMLKAREQYREAAAVYFRICNEEPLHSAVMLEQASYCYLLSKPPLIRKYGFHLVL
SGDRYKRMDQIYHAIRTYRNAIAVFKGTEWSHIKDHVHFHIGQWYASLGLYDVAVTQMLE
ILDCNHQSKATQELFLKDFLKIIQKAGKTVKVLKLPLPKISISSLKVIFDDHRTYASPTA
ANVRESVWRSLEEDMIPSLSSGRTNWLELQSKIMSKKYKESNICVAGEPVKVNIVFKNPL
QIPISISCVSLICDLSSKSDGTKSDTNNITAGFQNNTELKWSSDWEMGSNNASFTSTEVH
LSLEGNEEKVVQLTVTPKIEGILQVVGIRWKLSDSIMGFHNFINNLGQKNIAKGRQKVKY
SLADNLKFIVIKSLPKLEGSILSLPQVAYAGDLQRLVLELTNQSKFSVKNLKMKISQSRF
LKIGKQENMNADFPACLEKPINSEQGVRPIPNTTSNDTFLFSEDTSIQGGTPLLLPLWLR
AAVPGNISLYISIYYEMEGVSDIMRYRILRMHYNIQVLPSLDLSFQINPCPSRLHEFLVR
MDVMNKTSSEVFQIHQLSSIGQNWELSLLQPVDSIFPSRALMPSQALSCFFVLKNVNKSF
SSEKKVSSVPVLLGSDLKLGSQSSDEQLFDTANFPLAAFHYSERAYQGISNQELNTVDFI
LITRPLKNSTDPGISESSRLFSHHVCHCSTSSNSPISWLLEGPRSSYHNFSSSFSEINFK
MTIYNSSDSIASIRIKTIDSAEGNESAPPSPSSANQTGWHYASLTQDIKVTSDVLGAQMA
KSSSLESVSPFIWSGTSSTTLQIEPNSMAEAPLQICIFSPGIYDLSNYILQWKLLPSSRS
GNDETNVSSGTCQGYPYYLTVLQSN
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcaaatacaccactgggcaggatgctgctggaagagatcactccggttatc
atggtgctgaataccccacttgttgaagaagcctgcctgaagaatggtctctcattcatc
cagatgctcagccccttctgctcgtttaacaacattgacgtgcccgtacggaccgccagt
gatcaaccttacaggattaagaaattcagttcacggttgttttacggttcggacattcat
caaccaaatttcgaggcatcaaaagagcgactgaaacaagtcattacacaagccagcgag
aaagatctttctaaactatgttctgatccacctcaaattaatgaagcagttgactgtttt
gagtctgcaattctaccttcgtggtttcagttatttaacaaagagcttatacgtaatgta
tccttttcagaacatgaagcttttgaccatcctgtggcatgtcttttggttgtctcttca
agcgatgatcatcctgtcaacaaatttgttgacctctttaacacaatcaaattggcctct
cttctagatgatggtgccacggaccctaagattatgaagcattatttgttgttgcatgat
aatcaagatggctcttcagagaaggcaagtaaaatactaactgaaatgaggagtgcattt
ggttcgaatgactgccaattactttctatcaattcttctcatgatgaactcattgaacgg
gaagatgatccttggggtttgtttaagcccgatgcttcgattggtaagcaacttggctgc
tttcttagcaatgaggatctaattgagatcagagagttaatgcaagatttttcgtcaaaa
catatcattccttacatggagcaaaaaatacgagcattaaaccaacaggtgtctgctaca
aggaaaggtttcagaaatcagataaaaaacttatggtggagaaaggggaaagaagacaca
gtagattctccaaccggcccaacgtatacctataactctattgagtctcagattagagtt
ttgggtgactatgccttcatgttgcgggattatgaacttgcattgtccaattatcgcctg
atttctactgattacaaacttgataaagcttggaaacgctatgctggtgttcaggagatg
atggggcttacgtactttttgctagatcaatcaaggaaggaagctgagtattgcatggaa
aatgccctcaatacttatttgaaaatgggcccgtctggtcacctaaatgcaacacgctgt
ggtctttggtcagcagagatgttgaaggcaagagagcaatacagagaggctgctgctgtt
tatttccgtatttgtaatgaggaacctttacattcagctgtcatgcttgagcaagcatct
tactgttacctgctttctaaacctcctttgatacgcaaatatggatttcatcttgttctc
tctggtgatcgttacaaaagaatggatcaaatttaccatgcaattcgtacatatagaaat
gcaattgctgtttttaaaggaacagaatggagccacatcaaagatcatgtacatttccat
attggacagtggtatgcttcgcttggtctatatgacgttgctgttactcaaatgctggaa
attctcgactgtaatcatcagtcaaaggcaacgcaggaattgtttctaaaggattttctt
aaaattattcagaaggcaggaaagacagtcaaggtgttaaaactaccattgcccaagatc
agcatttcatcattaaaggtcatctttgatgatcatcgaacttatgcatcacctacggct
gctaatgttcgagaaagcgtatggcgctcattggaggaggacatgattccatcgttatca
tcaggaaggacaaattggttggagttacagtcaaagattatgtcgaaaaagtataaagaa
tcaaatatctgtgtggcaggagaacctgtgaaagtgaatattgtatttaaaaaccctctt
cagatccctatttccatctcttgcgtttccctgatatgtgatctttcttcaaaatctgat
ggaactaaatctgatacaaataacataactgctggtttccagaataatactgaactcaag
tggtcatctgattgggagatgggatctaacaatgcttcatttacttcgactgaagttcac
ctctcattagaaggaaatgaagaaaaagttgtgcaactgacagttactcccaaaatagaa
ggcatcctacaagttgttggtattaggtggaaactgtccgattctatcatgggctttcac
aattttattaacaatttaggacagaagaatattgcgaaggggagacagaaagttaagtat
tctcttgctgataacctgaagttcatagtaatcaagagtctaccaaagcttgagggcagc
attctttcacttcctcaagtcgcatatgctggagatttacagcgccttgtccttgaactg
acaaatcaatctaaattttctgtaaagaatctgaaaatgaagatcagtcaatcacgattc
ttgaaaatcgggaagcaagaaaatatgaatgcagactttcctgcttgcttggagaagcca
attaatagtgaacagggagtacgccctatacctaatacaacatcaaatgatacatttttg
ttttcagaggacacttcaattcaaggcggaacacccttattgttgcccctttggcttcga
gctgctgttcctggaaatatatccttatacataagtatatattatgagatggaaggtgta
tcagatatcatgagatatcgcattctacgcatgcattacaatattcaggttttgccatcc
ctggatttatcgttccaaatcaatccatgtccatcaagattgcatgagtttcttgtccga
atggatgttatgaacaagactagctccgaggttttccaaattcatcagttgtcatctatt
ggacagaactgggaactttccttacttcaacctgttgatagtatttttccttctcgagct
ttaatgcctagtcaagcattgtcatgtttcttcgttctcaagaatgttaacaaatcgttc
agttctgaaaaaaaagtatcttctgtcccggtgctacttggaagtgatctaaagttgggt
tctcagagtagcgatgaacagctctttgatacggctaattttcctctagctgctttccat
tattctgaaagagcataccaaggaatttcaaaccaggaactaaatacagtagactttata
ttgatcactcggccacttaagaattctactgatcctggaatttctgaatcatcgcgtcta
ttctctcatcatgtgtgccattgcagtacttcaagcaacagtcctatatcttggctactt
gaagggcctcggagttcatatcacaacttctcttcttctttcagcgaaatcaatttcaaa
atgacaatctataactcttcagattcaattgcatccatacgcattaaaacaattgactca
gctgaaggtaatgaatctgctcctccatcccctagctccgcgaaccaaacaggatggcac
tatgcctcacttacacaggacattaaggtcacatctgatgttctgggagcacaaatggcc
aagtcatcttcacttgaaagtgtctctccatttatctggtccggaacaagctcaacaaca
ctacaaattgaacccaactccatggctgaagctcctcttcagatctgtatcttttctcct
ggaatatatgatctctcaaactatattttacagtggaaacttctgccgtcatctcgatca
ggaaacgacgaaactaacgtctcatcaggaacttgccagggctatccatactatctcact
gtccttcaatctaattga
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