Cucurbita pepo subsp. pepo (vegetable marrow): 111790984
Help
Entry
111790984 CDS
T05351
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111790984
Enzymes [BR:
cpep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111790984
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111790984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
AAA_22
HHH
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
111790984
NCBI-ProteinID:
XP_023527908
LinkDB
All DBs
Position
LG01:19625742..19634683
Genome browser
AA seq
1152 aa
AA seq
DB search
MDSYSLKSVSDLPAPLRSTFSFRYFNSLQSECFPVCFNSDSNMVISAPTGSGKTVLFELC
ILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQKFGSWGVSCLELTGDNET
YNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFSDIALVLIDEVHLLNDPRGAALEAI
VSRIKMISRNPEMKSSPLSHVRFLAVSATIPNIGDLAEWLNVPVQGVKRFGEEMRPVKLT
SKVFGYAPAKNDFMFEKRLQNYIFDVLMQYSKGKSALVFCSTRKGAQEAAQRLSQTAMTF
GYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGVGYHNGGLCLKDRNLIESLFLKGDI
RVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGI
VIIMTRRDTVHLYENLLNGCETVESQLLSCVTEHLTAEIVQMTISDIVKAIEWMKCSYLY
VRMKKNPQKYAIRNGISYHNTEKHMEDICIEKVNELSRHQMIWMDEDGFLLKPLDPGRLM
TKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEIAWIQLRRTEKKLLNDVNNDKDGRLR
FHILGEKGKKKKRIQTREEKIFILANDCLTGDPSIHDLSLSQDMNSICSNGCRIAKCMKE
YFVYRKNYTGTFSSMLLAKSLYQKLWDDSPFLLKQLPGIGMVTAKALHSMGIKSFEALAE
ADPRKIEIVTGRKYPFGNHIKESLSSLPPEVDLKLEEAECGRQGKAKLIVTLTRLPQSYR
PNKRHYAEMIVGLEEDNHILFHEKIRVDEFSSPYSAVVLVSHPQQGKLTIKADLIFDEYI
GIDLHRKLQLMERNSNARSKWGRMPPSSFPPPEEVYIIDNDSEPLPQAAVKEPPKSGDSN
SLLDSMPSFNLLDEEFEDAEPATGNDEDECKIITERTVFDHIRKKAKSFPVLAASKNSAY
SPAPETYSFTRNTQPLEFQVEALEEKQRNELSPHTKVESFSGFREEVGNEFPTLQNHFPS
GPHFMDDEKGEMGLQTEESEIIITEETIFDDIIRKGNSFPVVSQICVNTPGAYSKLNRAS
DAEVASMQMLSFDISMVKENKRPRPASPNISNTWNHQSPPVETKKNCCSLETATETREVD
PFVGFKSVFSFL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggactcatattcactgaaatccgtatcagatttacccgcaccacttcgctcgactttt
agttttaggtacttcaattcattacagagtgaatgttttcctgtttgtttcaactccgat
tcgaacatggtcatttcagcccctactgggagtggtaaaactgtactgtttgagctttgc
attttgaggcttctttcaaaatttattgccgaggggaagttcatccacgaaaagggaact
ctaaaaagcatatatattgccccatctaaggctttagtacaggagaagctccgtgattgg
aatcagaaatttggttcttggggggtcagctgtttggagctaacaggagataatgaaact
tacaatatgaaacatatacaagaagctgacattattctaacaacgcctgagaaatttgat
gcagtaactcggtatcacataaaggatggtggtttaggctttttcagtgacatagccctt
gtacttattgatgaagttcatcttttgaatgatccacgtggagcagccttggaagccata
gttagtagaattaaaatgatttctcgcaaccctgaaatgaaatccagtcctctctctcat
gttcgtttcttagctgtatctgctacaatcccaaacattggggatcttgcagaatggctt
aacgtccctgttcaaggagtcaaaaggttcggagaagaaatgaggcctgttaagttaacc
agcaaagtatttggctatgcccctgctaaaaatgatttcatgtttgagaagcgccttcag
aactacatttttgatgttctcatgcaatattcaaaaggaaaatctgcattagtgttttgc
tcaactagaaaaggagcgcaagaagcagctcaacggctctcgcaaacagcaatgaccttt
ggttattcaaatccttttattaaaagcaaggaacagctggaaaggttacgagaagcttca
ctatcatgcagtgataagcaaatgcaatctaatattctttatggtgttgggtatcacaat
ggtgggctttgcttgaaggatcgcaatctcattgaaagcctttttctcaagggtgatatt
cgagttatttgcactacaaatactcttgctcatggaatcaacttgccagcacatacagta
ataataaaatcaactcagcactttaacaaggagaagggcctttacatggaatatgaccgt
tccacaatactacagatgtgcgggagggcaggtcggcctccattcgatgatacgggaatt
gtcataatcatgacaagaagagacacagtccatttgtatgagaatctcctaaatggatgt
gaaactgtggaatcgcaactgctttcgtgtgtgacggagcatttaactgcggagatagtt
caaatgaccatctcagatatagtaaaggcaattgaatggatgaagtgttcgtatttatac
gtaagaatgaaaaagaatccgcagaaatatgctatcaggaatggaatttcttatcacaat
acggagaagcacatggaagacatttgcattgagaaagtgaatgaattatctcgacatcag
atgatttggatggatgaagatggcttcctcttgaagccactagatcccgggaggttgatg
acaaaatattatttgaagtttgataccatgaaacacattatgcatgcccctgaaaattgc
agtctagaggaggcgctacatatcatttgccatgccgaggaaatcgcttggattcagctt
aggcgcactgagaagaagcttcttaatgatgtaaacaatgataaagatgggaggctgcgt
tttcacattcttggtgaaaaggggaagaagaaaaaacgtatacagacgagagaagaaaaa
atatttattttagcaaacgattgcttgactggtgatccttcaattcacgatttatccctc
agtcaggacatgaattctatttgctcaaatggatgcagaattgccaaatgcatgaaagaa
tattttgtatacagaaagaactatacaggaaccttcagctcaatgcttctagcaaaatct
ctatatcaaaaactctgggatgacagtccatttttgctcaaacaactacctggaattgga
atggtgactgcaaaggcgttgcattctatgggaatcaaatcatttgaggcacttgctgaa
gcggatccgaggaaaatagagatagtcacaggcagaaagtacccatttgggaatcatatc
aaggagtcattatcatccttaccaccggaagtggacctgaagctcgaggaagctgaatgc
ggtagacaagggaaggccaagctcatcgtaacattaacaagattgccccagtcttaccga
ccaaataaacgacattacgctgaaatgattgttggcttagaagaagataaccacattctc
tttcatgaaaaaataagagtagatgaattctccagcccttacagtgcagttgttcttgtc
tcacatcctcaacaaggaaagttgacgattaaagctgaccttatttttgatgaatacatt
ggcattgatctccaccgaaaacttcaactaatggaacgaaattcaaacgcgagaagcaaa
tggggaagaatgccgccgtcctcctttcctccaccagaggaagtatacatcatagacaat
gacagtgaacctctaccacaagctgcagtaaaagagcctcccaaatctggcgactcgaac
tcgttactagattccatgccgagtttcaacctcctagatgaagagtttgaggacgccgag
cctgcaactggcaacgacgaagatgaatgcaaaatcatcactgaacgaactgtatttgac
cacatacgtaagaaagccaaaagcttccctgtgttggctgcttcaaaaaatagtgcttat
tcaccagcaccagagacatatagtttcactagaaacacgcagccgctagaattccaggtt
gaagctttggaagagaaacagagaaatgaactttccccacatactaaagtggagtcgttt
tcaggcttcagagaggaagttggaaatgaatttccgactctacaaaaccacttcccctct
ggaccacatttcatggatgacgaaaaaggggaaatgggtctccagacagaagaaagtgaa
atcatcataacggaggaaaccatatttgatgatataataagaaaaggtaacagttttcct
gtagtatcccaaatttgtgtgaatacaccaggtgcatacagcaaattgaatcgggcttca
gatgcagaagtggcatccatgcaaatgctgtcttttgatatctccatggtgaaggaaaac
aagcggccacgtccagcgagccctaatatcagcaacacctggaaccaccagagcccacct
gtagaaaccaaaaagaactgctgctcgctagaaactgccaccgagaccagggaagtagat
cctttcgttggatttaagagcgttttttctttcctttga
DBGET
integrated database retrieval system
