KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111793875
Entry
111793875         CDS       T05351                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111793875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111793875
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     111793875
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 111793875
NCBI-ProteinID: XP_023531708
LinkDB
Position
LG04:5951963..5957347
AA seq 473 aa
MGASVIDELSLAPVHNFNSSFQDLRCSKHVHDNVHGNIYLDPLSLKFIDTEQFQRLRELK
QLGLTHMVYPGAVHSRFEHSLGVYWLAREAVEKLRYYQGAELDIDHNDIQTVKLAGLLHD
VGHGPFSHLFEREFLPQVLSGYEWSHELMSVKMVDHIVDEHHIDIDSGMIKRVKDMILSS
SEFTRPKVGSREKGFLYDIVANGRNGIDVDKFDYIVRDCRACGLGCNFQFQRLMETMRVI
DDEICYKAKDYLTIHKLFSTRADLYRTVYMHPKVKAIELMLVDALLKANDYLEISSHIHD
PSQYWKLDDSVVKTIETASDQELKESRDLILQIRRRNLYQFCNEYAVPKDKLENFKDVTA
KDIVCSQKNGGVMLQEDDVAVSNVRIDLTRGRNNPLERIHFFKDYESNDKFKISDDRISH
LLPTSYQDMIVRVYSKKPELVEAISEAFENFQLKTYGIKTQVHATPEKKKRRI
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgggggcttctgtcatcgacgaactgtcgctcgctccggttcacaacttcaattcatcc
ttccaggatctccgctgctccaagcacgtccatgacaacgttcacggcaacatttacctc
gatccgctttctttgaagtttattgataccgagcagtttcagaggcttcgtgaattgaaa
cagcttggtttgacgcatatggtatatccgggagctgtacattctaggtttgaacattcg
ttaggagtgtattggcttgccagggaagctgttgaaaagcttagatattaccaaggagca
gagcttgatattgatcacaatgatatccaaactgtgaaacttgctggccttctgcatgat
gtaggccatgggccttttagtcacctgtttgagcgcgagttcctccctcaggttctgagt
ggctatgaatggtctcatgaacttatgtcggttaagatggttgaccatattgttgatgag
caccacattgatattgattctggaatgataaaaagagttaaggatatgatactatctagt
tctgaatttactcggccaaaggtaggttcaagggagaagggattcttgtacgacattgtt
gcaaatggacgaaatggaattgatgtggacaagtttgattatattgttcgtgattgtcga
gcttgcggtctagggtgcaactttcagtttcagaggttaatggagactatgcgagttata
gatgatgaaatttgctataaggcgaaggactatctcaccattcacaagttgttttctact
cgggctgatttgtatcgaacagtttatatgcacccaaaagttaaggccattgagcttatg
ttagttgatgctctgttgaaggcaaatgattatctggaaatttcatctcacatccacgat
ccatcccagtactggaagctagatgattctgtagttaaaacaattgagacagcttcagac
caagaactaaaggaatctagggatcttatcttgcaaatccggagaagaaatctctaccag
ttttgtaatgaatatgccgtcccaaaagacaaactggaaaatttcaaggatgtaactgct
aaagatattgtttgttctcagaaaaatggtggagtgatgctacaagaggatgatgttgct
gtcagcaacgttaggatcgacttgacacggggcagaaataatcctcttgaaaggatccat
ttctttaaggactatgaaagcaacgataaattcaagatttctgatgatcgcataagccac
ttactgccaacatcatatcaagatatgatagtaagggtgtattcgaagaaacccgaactg
gtagaagccatttcagaagcatttgaaaactttcagttgaaaacttatgggattaaaaca
caagtacacgcaacaccggagaagaagaaacgtcgcatttga

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