Cucurbita pepo subsp. pepo (vegetable marrow): 111796117
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Entry
111796117 CDS
T05351
Name
(RefSeq) transcription factor LAF1-like
KO
K09422
transcription factor MYB, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111796117
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111796117
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Rap1_C
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
111796117
NCBI-ProteinID:
XP_023534576
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Position
LG05:4005673..4006577
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AA seq
229 aa
AA seq
DB search
MGRETASHKAKPKHRKGLWSPEEDQRLRNFILNHGHACWSSVPLKAGLERNGKSCRLRWI
NYLRPGLKRGTFSQQEQDTIISLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKRVEK
QGCSAHSTASTTSDSADSSITAQSMDSPKPKLLFAEWLAGAGIGFGQSFSSVHEGTGDLN
GTHLEGGGLGSEIQNNGFMMDSHMKFEDQICNGNYDCVDQLLHFGNGFM
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgaaacggcgtcgcataaggcaaagccgaagcacagaaagggcttatggtcg
ccggaggaagaccagaggctcagaaacttcatcctcaaccatggccatgcctgttggagc
tctgttcctctcaaggccggactggaaagaaatgggaagagctgtcgattgagatggatc
aattacctaaggccgggtcttaaaagagggaccttttcccagcaagaacaggacacgatt
atttcccttcatcatatgctcggaaacaaatggtctcagatagcacaacatttaccggga
agaacggacaacgaagtgaaaaacttgtggcattcttacctgaagaagagagtggaaaaa
cagggctgttcagctcattccacagcttcaactacctcggactcagcagattcttcaata
acagctcagtccatggactctcccaagcctaagctgttgttcgccgagtggctcgccggc
gccggaattgggtttggtcagagcttcagctccgtccatgagggcaccggtgatttaaat
ggaacccatttggagggtgggggcttgggatcggagattcagaataatgggttcatgatg
gattctcatatgaagtttgaggatcagatttgtaatgggaattatgattgtgttgatcaa
cttcttcactttgggaatggttttatgtaa
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