Cucurbita pepo subsp. pepo (vegetable marrow): 111802120
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Entry
111802120 CDS
T05351
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111802120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111802120
04147 Exosome [BR:
cpep04147
]
111802120
04090 CD molecules [BR:
cpep04090
]
111802120
Enzymes [BR:
cpep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111802120
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111802120
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111802120
CD molecules [BR:
cpep04090
]
Proteins
111802120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
Zeta_toxin
AAA_21
AAA_15
RsgA_GTPase
SbcC_Walker_B
AAA_24
DUF815
nSTAND1
Motif
Other DBs
NCBI-GeneID:
111802120
NCBI-ProteinID:
XP_023542149
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All DBs
Position
LG09:4339164..4345102
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AA seq
1283 aa
AA seq
DB search
MASPSTSAPSNSSLNGEQKGVKNKKKEEEEKEEKGKSVPFLKLFSFADSYDYVLMLVGII
GSMGNGIGMPLMTVIFGQVINTFGSSPDTHDIVSKVSKVCLNYVYLAVGTGAAAFLQVSC
WIVTGERQAARIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTILIQDAMGEKVGKTI
QLVTTFIGGFTIAFVRGWLLALVMVSAIPLLVLAGATIARYMSQMASRGQSAYASAANVV
EQTIGSIRTVASFTGEKQAVSSYKKFLTQAYKSGVKEGLGGGIGIGMVMMIVFCTYSLAV
WFGGKMIIEKGYNGGQVINVIIAVLAGSMSLGQISPCLSAFAAGQAAAYKMFETIERRPN
IDVYDPKGKTLDDIRGDIDLKDVHFSYPTRPDEPIFSGFSLHIPSGTTAALVGESGSGKS
TVISLIERFYDPQSGEVLIDGINLKEFQLRWIRTKIGLVSQEPILFSASIKDNIAYGKDE
ATDEEIKGACELANAAKFIDKLPQGLNTLVGEHGTQLSGGQKQRIAIARAILKNPRILLL
DEATSALDAESERVVQEALDRIMINRSTVIVAHRLSTVRNADMIAVIHRGKMVEKGSHSE
LVSDPDGAYSQLIRLQEANKDSEHASKDVNRTELSLESMRQSSQRASYLRSISRGSSVSR
SSRRSLSVFGLTTGIDLPNAGDIEDTIEETSKSPPVSLGRLAALNKPEIPVLIIGTIGAV
LCGVLLPIFGLLVSTVIKTFYLPPDQLKKDTKFWALIYIVLGVTSLVAHPWRAYFFSVAG
CKLIERIRSLCFEKVVRMEVSWFDEPEHSSGAIGARLSSDAASVRALVGDSLSQNIGNLA
SAVAGLAIAFAASWELALIVLALIPLIGINGYIQIKFIQGFSGDAKSMYEEASQVANDAV
GGIRTVASFCAEDKVMDMYKTKCEAPLKTGIKQGLISGVGFGVSFLILFNVYALTFYVGS
LLVQHGRTTFPDVFQVFFALSMAATGISHSSSMTQDTTKAKAAAASVFAIIDRPSSIDPS
DESGTVLGDVKGEIELKHISFKYPLRPNVQIFRDLCLHIRPGQTVALVGESGSGKSTVIA
LLQRFYDPDSGSITIDGVEIKEFQLRWLRQQMGLVSQEPMLFNETIRNNIAYGKGGEASE
EEIIRAAEYANAHRFISGLQQGYDTNVGERGLQLSGGQKQRVAIARAIIKDPKILLLDEA
TSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIMNADVIAVVKNGVIVEKGKHEKLIA
IKDGFYASLVQLHSSAAASSPST
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccatcgacatcggcaccgagcaactcgagcttgaatggggagcagaaagga
gtgaagaacaagaagaaagaagaagaagaaaaagaggagaaaggaaaatctgttcctttt
cttaagctcttctcgtttgcggattcatatgattacgtacttatgctagttggaatcatt
ggaagcatggggaatggaattggaatgcctctaatgactgtgatctttggacaagtgatc
aatacttttgggagtagtccggacacgcacgacatcgtttcgaaagtttccaaggtgtgc
ctaaattatgtgtacttggctgtgggaactggtgcagcggcgtttcttcaggtgtcttgc
tggatagtgacgggggagagacaggctgctcggattcgagggttgtatttgaaaactata
ttgagacaagatgttgcgttcttcgacaacgaaacaaataccggagaggttgtgggaaga
atgtctggtgataccatcctcattcaagatgccatgggtgagaaggttgggaaaaccatt
caactagttacaaccttcattggaggcttcaccatagctttcgtaagaggctggctgctg
gcacttgtaatggtatctgctatccctcttcttgtgctagcaggagcaacaattgctcga
tacatgtcccaaatggcttctcgggggcaaagtgcttatgccagtgctgcaaatgttgtt
gaacagactattggctcaataagaacggttgcatcatttacgggtgagaagcaagccgtg
agcagttacaagaagttcctaactcaggcttacaaatcaggtgtgaaggaaggcctggga
ggcggaataggaatcggcatggtaatgatgatcgtattttgtacgtactctttagctgtt
tggtttggcggaaagatgataatagaaaaaggatataatgggggccaagtgataaatgtc
atcatagctgttttggcaggctcaatgtctctaggacaaatatcgccatgcttgagtgca
tttgctgcgggtcaagctgctgcatacaagatgtttgagacaattgaaaggaggccaaac
attgacgtttacgatccaaagggtaaaacattagacgatattcgaggggacatagatttg
aaggatgtgcatttcagttatccaaccaggccagatgaacccatattcagtgggttctct
cttcatattccatctggcactactgcagcattggttggggagagtgggagtggcaagtcc
accgtgatcagtttgatcgagagattctatgatccacagtccggtgaggtgctcatcgat
ggcattaacctgaaagagtttcagcttcgatggattcggacgaaaattggtcttgtcagc
caagagccaatactcttcagtgcctccattaaagataatatagcatatggcaaggatgag
gcaactgatgaggaaattaagggtgcatgtgaactagcaaatgctgctaaatttattgat
aaactgcctcagggattgaacaccctggtgggggagcatggaactcagttgtctggtggg
caaaagcagaggattgcaatagcaagggcaattctgaagaaccctcgaattctacttcta
gatgaagccacgagtgcgctcgatgcagaatcggagagggtggtgcaagaggctttagat
aggattatgatcaacagaagtactgtgattgttgcccatcgtttgagcacggtcaggaac
gccgatatgattgctgtaattcatagaggaaagatggttgagaaaggttcccactcggaa
ctcgtcagcgatccagatggcgcatattcacaactaatacgcctgcaggaagcgaacaaa
gactcggaacacgcttccaaagatgtgaatcgaacagagctttctctggaatcaatgaga
cagtcaagtcaaagggcgtcttacttgagatccataagtaggggatcatcagttagtcgc
agtagccgccggtctttgtctgtgtttggtttaaccactggaatcgacttaccgaatgct
ggtgacatcgaagacacaattgaagagacctcaaaatctcctcccgtttctcttggtcgc
cttgctgcacttaacaagcctgagattccagtgcttataattggaactattggggcagtg
ttgtgtggggtgctacttcccatctttggattactggtttctactgtcatcaagacattt
tacctgcccccggatcagctgaaaaaggataccaagttctgggctctcatttacatagtt
cttggggtgacatcactggtggcacatccatggagagcatacttcttctcggtcgcggga
tgtaaattaatcgaacgtattagatcactgtgtttcgagaaggtggttcgtatggaggta
agttggtttgatgaacctgaacactcaagtggggcgattggtgcaagactatcgtccgat
gccgcatccgtgagagctctagtcggtgattcgctgtctcagaacataggcaaccttgca
tctgcagttgcaggtttggccattgcttttgctgcaagctgggaattggctctcatcgtt
cttgctctcattcctctcattggaatcaatggctatatacaaatcaaattcatacaggga
tttagcggtgatgccaagagtatgtatgaggaagccagccaagtcgcaaatgatgcagta
ggaggcataagaacagttgcttctttctgtgcagaagataaagtgatggatatgtataaa
accaaatgtgaagctcctctcaaaacagggataaaacaaggccttattagtggagttggc
tttggagtctccttcttaatattgttcaacgtatatgccctcacattctacgtaggatcc
cttctcgtgcagcacggtcgaacgacgtttcctgatgtctttcaagtgttctttgccttg
tcaatggcagctactggaatctctcactcgagctccatgactcaagacactaccaaagcc
aaggctgctgctgcttccgtgtttgcaattatagacagaccctccagcatcgatcccagc
gacgaatctgggacggtattaggcgatgtgaagggagaaattgagcttaaacatataagc
ttcaagtaccctttaaggccaaacgtccaaatattcagagacctgtgcctgcacattcgt
cctggccagacagtagctctggtgggagaaagtggaagtggtaagtcgacagtgatagcg
ctattgcagaggttttacgatcctgattcgggcagcataacaatcgacggagtagaaatc
aaagagtttcagctgagatggctgagacagcaaatggggctggtgagccaagagccaatg
ctgttcaacgaaaccatacgaaacaacatagcatacggcaagggaggggaagcgagcgag
gaggagataataagagcagcggagtacgcgaatgcacacaggttcatcagtggattacaa
caaggatacgacacaaatgtcggggagaggggactgcagttgtcgggtggccaaaagcaa
cgagtggccattgctcgagccatcataaaggacccaaaaatactactgctcgatgaagcc
acgagcgcactggacgcagagtcggaacgagtggtgcaagatgcattagacagagtgatg
gtgaatagaaccacggtcgtggtggctcatcggctctcgacaatcatgaatgctgatgtg
atcgctgttgttaagaacggagtcatcgtcgagaaaggcaagcacgagaagcttattgcg
atcaaagacgggttttatgcctctttagttcagctccacagttcagctgctgcttcctct
cccagcacctaa
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integrated database retrieval system
