Cucurbita pepo subsp. pepo (vegetable marrow): 111803577
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Entry
111803577 CDS
T05351
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111803577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111803577
Spliceosome [BR:
cpep03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
111803577
Complex B
111803577
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
111803577
NCBI-ProteinID:
XP_023543825
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Position
LG10:3525193..3530538
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AA seq
476 aa
AA seq
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MGDYDDAFMRNPNAAVQTRTKAQNRANVLQLKLIGQSHPTGLTTNLLKLFEPRPPLEFKP
PPEKRKCPPLTGMAQFVSNFAEPDDPEYSPPVLKGETPAQRRARIHLLRIEKGAKKAVEE
LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRARLITDKVTGKPKG
YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRWLGGGLGTTRVGGED
NNQKQSGREQQQSGAPSRSEEPRAREDRIGERDREKSYEKGRDREREREKSHERSRERSK
DRDVKEDRHHRDRDRTRDRDRDRERDKERDRGHDRDRTRDRDRDRGRDRGRDYERDRGRD
RDRHRDRDRERDRDLEGGFPDPDRGRSHDRESDFNRESKYEKDRHGDRDRDIDRAETEDG
HGWYDQPEYGHRHPDNDPDHQNYDHFEHNRSRGQYDHPEDHRNQDRYDQNDRMEDD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggagactacgatgatgccttcatgcggaatcccaacgcggcggttcagactcgtacc
aaggcccagaatcgtgccaatgtccttcaactcaaactgattggacagagtcatcccact
ggtcttacgaccaatctcctgaagctctttgagccccgaccgcctttggaattcaaacct
ccaccggaaaaaagaaaatgtccaccattaacagggatggcgcagtttgtgagtaatttt
gctgaacctgatgatccagaatattctccccctgttctaaagggtgaaactccggcacaa
aggagggctagaattcacttgctaagaattgaaaagggtgcgaagaaagctgttgaggag
ctgccaaaatatcttgaacgtgacgatccaaatgtaactggtgatccatacaaaacgctc
tttgtggctagactgaattatgagacaactgagagcagaatcaaaagagagtttgagtct
tatgggccaatcaaacgggcccgattgattacggacaaagtgacaggtaaacctaaaggc
tacgcattcattgagtacatgcacaaaagagatatgaaagctgcatataagcaagctgat
ggtagaaagattgatggtagaagggtacttgtggacgtcgagcgaggtagaacagtaccg
aattggcgtcctcgatggctgggtggcggtcttggaactaccagagtgggaggcgaagat
aataaccagaagcagtctggaagggagcaacagcagtctggtgcaccatctcgatcagag
gagcctagggctcgtgaagatcgcattggagagcgagatagggaaaagtcttatgagaag
ggaagagacagagaaagagagagagagaagtctcatgaacgttcccgtgagagatctaag
gatcgtgatgtcaaagaagataggcatcacagagatcgtgataggactagagatagagat
cgggacagagaaagggacaaagagagagatcgtggccatgaccgcgatagaacacgtgat
cgtgatcgtgatcgaggaagggatcgaggccgtgactatgagcgtgatagaggtcgtgat
cgggatcgtcatcgcgacagagatagggagagggatcgggatcttgaagggggatttcca
gaccctgatcgtggtcgctcccatgatagggaatctgattttaatcgggaatcaaaatat
gaaaaggatagacatggtgatagggacagagatattgatcgtgctgaaacagaagatggt
catgggtggtatgatcagcctgagtatgggcatcgacacccagataatgatcccgatcac
caaaactacgatcactttgaacataaccgtagtcggggacaatatgatcacccagaagac
catcgtaaccaagatcgttatgatcagaatgatagaatggaggatgattaa
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