Cucurbita pepo subsp. pepo (vegetable marrow): 111807580
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Entry
111807580 CDS
T05351
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111807580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111807580
04147 Exosome [BR:
cpep04147
]
111807580
04090 CD molecules [BR:
cpep04090
]
111807580
Enzymes [BR:
cpep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111807580
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111807580
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111807580
CD molecules [BR:
cpep04090
]
Proteins
111807580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
111807580
NCBI-ProteinID:
XP_023549130
LinkDB
All DBs
Position
LG12:5753277..5760071
Genome browser
AA seq
1450 aa
AA seq
DB search
MSAVPGYRRHYPTPASSTDVSISFSQLDSSRKSTPETRSLNLHPATPFATDDDKSWQGEL
SWQFEPTGWRDSRNFGVALGPWGASIAPSSFSTTHALRRTANDYYLSPSRRVRRNVPSPY
SDGSCYGYIPAGRVELQSFVGGETENSLFIGESYIPSETSKIGPYSCQKNGSKGPLADKD
ELSKNYHAISEHSFNFEHSRMYSSYTDDSVSDASDEEDEVEPAKAVGLFSLFKYSTKWDF
LLIILGCLGALINGGSLPWYSYLFGNFVNQLAVESSEADKTQMMRDVARICLFMTGLAAI
VVVGAYMEITCWRLVGDRSAQRIRMMYLRAVLRQDISFFDTKISTGDIMHGISSDVAQIQ
EVMGEKMAHFIHHIFTFICGYVVGFLRSWKVSLVVFSVTPLMMFCGIAYKAVYVGLASKE
EASYRKAGGVAEQAISSIRTVFSFVAEDNLGAKYAELLENSVPFGRRIGFSKGVGMGVIY
LVTYSTWALAFWYGAILVAQKEITGGDAIACFFGVNVGGRGLALSLSYFAQFAQGTVAAG
RIFTILDRVPEIDSYSPMGRTLQNVRGRIEFKGVSFTYPSRPDTMILKSLNLVFPASKTL
ALVGASGGGKSTIFALIERFYDPIEGTISLDGCDIRTLQIKWLRDQIGMVGQEPVLFATS
IIENVMMGKENATEKEAIAACIAANADNFISALPQGYNTQVGDRGALLSGGQKQRIALAR
AMIKDPKILLLDEPTSALDSESESTVQKAIHQLSLGRTTIVIAHRLATVRNSHAIAVIEH
GSVIEIGTHRQLMEREGAYYNLAKLTSEAVQVTPPKQNDTQKFTDLSFNDISKSEYVVEF
PKSKYFKSTLEDKQEEKKEEKRRNVRIAEILKLQKPEIPILILGFLMGLSAGAILSIFPF
VLGEALQVYFDSETSRMKAKVGHLCIVLVGLGIGCIVFMTGQQGFCGWAGTKLTVRVRDL
LFRSILKQEPGWFDFPENSTGILISRLSIDCINFRSFLGDRISVLLMGLSAAAVGLGLSF
WLEWRLTMLAAALTPFTLGASYISLIINIGPKLDEKAYAKASNIASGAVSNIRTVTTFSA
QEQLVKAFNRSLSEPKKKSVKTSQILGLTFGFSQGAMYGAYTLTLWFAAHLVQQGKTSFG
DVYKIFLILVLSSFSVGQLAGLAPDTSVAETAIPAVLDVIDRRPLIGVDKGKRTKNERKS
LGVEFKMVTFAYPSRPEMIVLKDFCLKIKECSTVALVGESGSGKSTVIWLTQRFYDPNRG
KVLMGGVDLREMNVKWLRRQTALVGQEPALFAGSLRDNIAFANPKASWTEIEEAARDAYI
HKFISGLPQGYDTQVGESGVQLSGGQKQRIAIARAILKKSSVLLLDEASSALDLESEKHV
QAALRKVSKEATTIIVAHRLSSIRNADTIAVIRNGSVVEHGSHDTLMAKARLGGVYINMV
RAESEATAFS
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgttcccggctaccggcgccactatccgacgccggcgagttcgaccgacgtc
tctatctctttttcccaattagattcctcgagaaaatccactccagaaacacggtctcta
aaccttcatccagccactcccttcgccacagacgatgataaatcatggcaaggggagctc
tcatggcagttcgagccaactggatggcgagattctcgtaatttcggcgtagccttaggt
ccctggggtgcctctattgccccatcttcattttcaactacccacgctttacgccgaacc
gccaatgattactatctttctccctctcgccgcgttcgccggaatgttccgagcccgtac
agcgacggttcctgttacggctatattccggctggcagagtggaactacagagctttgtg
ggtggagaaacagagaactcattgttcatcggagaaagctatattcctagtgaaactagc
aaaatcggcccctattcctgccagaaaaatggaagtaaagggcctttggcggataaagat
gagcttagcaagaattaccatgctatttctgaacattcttttaactttgaacatagtagg
atgtattcatcatatactgatgatagtgtttcggatgccagtgatgaagaagatgaagtg
gagcctgctaaggcagttgggctttttagcttgtttaagtattcaacgaagtgggatttt
cttcttataatattggggtgtttaggagctctcatcaatggcggatctcttccttggtat
tcttatctttttgggaattttgtcaaccagcttgctgtagaatcttctgaagctgacaag
actcagatgatgagagatgtggcaaggatatgcctgttcatgactggattagcagcaatt
gtggtggttggagcatacatggagataacctgttggagattggtgggggatcgttcggct
cagcgtattagaatgatgtatctacgagctgttctacgacaggatatcagctttttcgac
acaaaaattagcacgggtgatattatgcatggaatttccagtgatgtggctcaaatccaa
gaagtgatgggggagaagatggctcacttcattcaccacatattcaccttcatatgtggg
tatgtagtaggttttctaaggtcatggaaagtttctttggttgtcttctcagtgacccct
ctgatgatgttctgtggcatagcttataaagccgtttatgttggcctagcttcaaaagaa
gaggcttcttacaggaaagctgggggagtggcagagcaagccatcagttcaatccgaact
gtgttttcgttcgttgcagaagataaccttggtgcaaaatatgctgagctcttggaaaac
tctgtgccatttgggaggaggattggattctcgaaaggcgtaggcatgggagttatttat
ctggtgacttactcaacctgggctttggctttctggtatggagctatcttggttgcccag
aaagagatcaccggtggcgacgcaatcgcttgtttctttggcgtcaacgtcggaggaagg
ggattggctctgtcactgtcatattttgctcagtttgcacaaggaacagtagcagcagga
agaattttcacaatcctagacagagttccagagatagattcctacagcccaatgggaaga
accctccaaaacgttcgtggaagaatagagttcaaaggcgtcagtttcacatacccatct
cgtccagataccatgattctcaagtcactcaatctggtgtttccagcttcaaagacactc
gctcttgttggcgccagtggcggcggtaaatccaccatttttgctctgatagagaggttc
tacgaccccattgaagggacgatcagtctggatgggtgtgatataaggacactgcaaatc
aagtggttgagagatcagattgggatggtgggtcaagaaccagtccttttcgccacaagt
attattgagaacgttatgatgggaaaagagaatgcgactgaaaaagaggccattgctgcc
tgtattgctgcaaatgctgacaacttcatctctgccctcccacaaggctataacacccag
gttggagatagaggagctctgctctcgggcggtcaaaaacaacgaatagctttggcacga
gccatgatcaaagaccccaaaattcttctcttagatgaaccaacaagtgcattggactca
gaatccgagtctacagttcaaaaggctatccatcagctttctttaggccgaacaacaatt
gttatcgctcacaggcttgcaactgtgagaaactcccatgccattgctgtcattgaacat
ggctctgttatcgaaattggtactcatcgtcagctgatggagcgagaaggcgcctattat
aacctcgccaaactcacatctgaagcagttcaagtaactcctcccaaacaaaatgatact
cagaaattcactgatctttcattcaatgatatctcaaagtcggagtacgtagttgagttt
ccgaagtcgaagtacttcaaatctacgcttgaggataagcaagaggagaagaaagaagag
aaacgaagaaacgttcggattgcagaaatcttgaaactacaaaagccagagattcccatc
ctgatattgggatttctcatgggattgagtgcaggtgcaattttgtcgatttttcctttc
gttcttggtgaagcccttcaagtttattttgatagtgaaacttctaggatgaaagccaaa
gttgggcatttgtgtatagtgctggttgggcttgggattggctgcattgtgttcatgaca
gggcagcaaggcttctgtggttgggctggaactaagctcacagtgagagtaagagatctt
ttgttcagatcaatactgaaacaagagcctggttggtttgatttccctgagaattccact
ggaattctcatatctaggctatcaatcgactgcatcaattttcgctcgtttcttggtgat
cgaatctcggtcttgttgatggggttgagtgcagctgcagttggccttgggctctcattt
tggctcgaatggagactaaccatgttggctgctgctctaacccctttcactcttggtgct
agttacataagtttgattataaatatcggaccaaaacttgatgaaaaagcttatgccaaa
gctagcaatattgcttcaggtgcggtgtcaaacatacggacagtgacaacgttttctgcg
caagagcagctggttaaagcctttaatcgatcattatccgagccgaagaagaaatcggtt
aaaacgtcgcagattttaggcttaacatttggcttctcccaaggtgccatgtatggagcc
tatactcttactctctggtttgctgcacaccttgttcaacaaggcaaaacaagttttggt
gatgtgtataagattttcctcattcttgttttgagctccttttctgttggacaacttgct
ggtttagctccggatacttctgtggcagaaactgcgattcccgcagtgttggatgtcatc
gatcggaggccattgataggtgtcgataaaggaaaacgtacgaagaacgaacggaaaagt
cttggtgttgaattcaaaatggtgacatttgcatacccatctaggccagagatgattgtg
ctgaaggacttctgcttaaagattaaggaatgcagcacagtggctttggttggtgagagt
ggctcgggaaaatcgacggtaatatggctgactcaacgattttacgacccgaaccgaggg
aaggtgctgatgggaggcgtagatttgagggagatgaatgtgaaatggttgaggaggcaa
acagcattggttggtcaagagcctgcactgtttgctggaagcttaagagacaacattgca
tttgcaaacccaaaggcctcatggactgagatagaagaggctgctagagatgcttacatt
cacaagttcatcagtggcctccctcaaggatacgacacacaggttggcgaaagcggggtt
cagctctcgggtggccagaagcaaaggatagcaatagcaagggcgattttgaagaaatca
agcgtgttgttactagatgaagcaagcagtgctttggacttagaatctgaaaaacatgtc
caagctgcacttaggaaggtgtcaaaggaagctactacgatcatagtcgcccatcggctt
tcgagtatccgtaatgctgatacgattgcagttattagaaatggctcggtcgtcgagcat
ggcagccatgacaccttaatggccaaagctcggctcggtggtgtgtatataaacatggtt
cgtgctgaatctgaagccactgcattttcttga
DBGET
integrated database retrieval system
