Cucurbita pepo subsp. pepo (vegetable marrow): 111807763
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Entry
111807763 CDS
T05351
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111807763
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
111807763
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
111807763
NCBI-ProteinID:
XP_023549399
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Position
LG12:7929635..7932373
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AA seq
412 aa
AA seq
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MISILDQYKFCTAPSPGTSSTPTAPSQGTPSAPATPSTASTPATPGTKVFDITTYGAKPD
GKKINTQAFMKAWVEACHSGGPAKVVFPPGKFLTGPLVYAGPCDAPMTVEIQGTVLATTD
ITEYSSPVWILFESITGLNLIGNGTFDGQGQETWMYNDCRDNPSCIMPPASLKFNKVTNG
LMEGISSLNSKGFHVFLVLSHHLRVNNLNIIAPDHSPNTDGIHISSITSSIIGTGDDCVS
IGHGSGNVTVSNIKCGPGHGISVGSLGKYKDEKDVSGIFVSNCTLKNTTFGVRIKTWADS
PPSQATGIHFQDIVLDSVKNPIIIDQFYGSKKNKKPSKVKISDVSYKNIQGTTISVVPVS
LQCSSAVPCDGITLEDIDLAFIGSDRKKALVGNSCLNAKFKATGKQNPPACA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaattttagaccaatataaattttgcacagccccaagcccaggcacctccagc
acccccacagccccaagccaaggcacccccagcgcccccgccaccccaagcaccgcaagc
acccccgccaccccaggcaccaaggttttcgatattacaacctatggtgccaagcctgat
ggcaagaaaatcaacacacaggcattcatgaaggcgtgggtagaagcatgccattcgggc
ggtccggcgaaggttgttttcccaccagggaagtttctaacggggccgttggtgtatgcc
gggccatgcgatgcaccaatgaccgttgaaattcaaggcactgtcttggcaaccactgat
attactgaatattcatctccagtatggattctatttgaatccatcactggtttgaatctc
attggtaatggaacctttgatggtcaaggtcaagaaacatggatgtataatgattgtcgc
gacaaccctagttgcattatgcctcccgcctcattaaagttcaacaaggtgaccaatgga
ttgatggaagggatttcttcgctcaacagcaaaggcttccacgtattcttggttttaagc
caccatcttagagttaataatctgaacataatagctccagatcatagtcctaacacggat
ggaattcacatcagttccattacaagttccatcataggcaccggagatgactgtgtttca
attggccatggctctggcaatgtcaccgtttccaacatcaagtgtggcccaggacatggc
atcagcgtgggaagtctaggaaaatataaagatgagaaggatgtaagtggaatttttgta
tcaaattgcacactgaagaacaccacatttggagtaaggatcaagacatgggcagattct
cctccaagccaagctaccggaatccatttccaagacattgtcttagattcagtcaaaaat
ccaatcattatagatcaattttacggttcgaagaagaacaaaaagccatcaaaggtgaag
atcagcgacgtttcttacaagaacattcagggcacaactatatccgtcgtccccgtttca
ttacagtgcagctcagcggtcccgtgcgatggcatcacattggaagatatcgatttggcc
tttattgggtcggatcggaaaaaggcgttggtcgggaattcatgtttgaatgccaaattt
aaggccacaggaaaacagaacccaccagcttgtgcatag
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