Cucurbita pepo subsp. pepo (vegetable marrow): 111811679
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Entry
111811679 CDS
T05351
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111811679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111811679
03051 Proteasome [BR:
cpep03051
]
111811679
Membrane trafficking [BR:
cpep04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111811679
Proteasome [BR:
cpep03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111811679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
XPC-binding
Ubiquitin_2
HOIP-UBA
Rad60-SLD_2
RDM
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
111811679
NCBI-ProteinID:
XP_023554442
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Position
LG15:complement(7104544..7109105)
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AA seq
548 aa
AA seq
DB search
MGADGDSSEHRVHGDGEEGGGSVTVNIRCSNGSKFSVRTSLDSSVGTFKSILAQNCDIPA
DQQRLIYKGRILKDDQTLVSYGLQADHTIHMVRGFAQASAPPSAPASNVNIRSSDTAPGV
TRGVGSTESGAFGNAGLGASLFPGLGFNPLGGGGAGLPEFEQVQQQLTQNPNMIREIMNM
PAIQNLMNNPDLMRTLITSNPQMRDIIDRNPELAHILNDPGILRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNAGNDSSANPFAALLANQGGA
PARNESNNSSTTGSETTGNAAPNTNPLPNPWGGTQTTTTRPTPAGDARAPGIGGLGGAGR
TNVDPLAGVVPDAAQMNQFLQNPAISQMMQSLLSNPQYMNQILNLNPQLRSMVDMNPQLR
EMMQNPEFVRQLTNPEMIQQMLSIQQSLLSTLNRQPSAQDSAQSGAAATGVPSAAGLEML
MNLFGGLGAGGLAVSNNPNVPPEELYATQLSQLQEMGFFDTQENIRALRATSGNVHAAVE
RLLGNLGQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgacggtgattccagcgagcaccgggttcatggcgacggtgaagaaggggga
ggtagtgttacagttaatattcgatgttctaatggttcgaaattttcggtgaggacgagt
cttgattcctcggttgggacatttaaatcaattcttgctcagaattgtgacattccagct
gatcagcagcgcttgatctacaagggtcgcatcttaaaggacgatcaaaccttagtcagt
tatggtttacaggcagatcacactattcacatggttcgaggttttgcccaagcttcagca
ccaccttctgcacctgcttccaatgttaatattagaagttctgacactgctcctggcgtt
acaagaggtgttggttctactgagagtggtgcttttggaaatgctggccttggtgcatca
ttatttcctggactgggttttaatcctcttggcgggggtggagctggacttccggagttc
gagcaagtgcaacaacagttgactcaaaacccgaacatgataagggaaataatgaacatg
cctgcaattcagaacttgatgaataaccctgacttgatgcggaccttaattacgagcaat
cctcagatgcgggatattattgacaggaacccagagcttgctcacattctcaatgaccct
ggtatccttcgacagacgttagaggctgcaaggaatcctgaactcatgagagagatgatg
agaaacactgaccgagctatgagtaacattgaatcttcccccgagggatttaacatgctg
aggcggatgtatgaaaatgttcaggagccatttctaaatgcaacaacgatggctggaaat
gctgggaatgattcgagtgcaaacccatttgcagctctcttggcaaaccaagggggtgca
ccagcgaggaacgagtctaataattcttcaactacaggatcagaaacaacaggaaatgct
gctccaaatacaaatccacttcctaatccctggggaggaactcagacaacaaccacacgg
cctactccagctggtgatgcaagggctcctggtatcggaggattaggaggggctggccgt
acaaatgtggatcctcttgctggtgttgtgccagacgcggctcagatgaatcagtttctg
caaaatccagctatttcacagatgatgcaaagcctgctctccaatcctcagtatatgaac
cagatcctcaatctgaacccacagctacggagcatggttgatatgaatcctcaattaaga
gaaatgatgcaaaatccagagttcgttcgccaattaactaatcctgagatgattcagcaa
atgctatcaattcagcagtcactcctctctaccttaaatcgacagccgtcagctcaagac
tctgctcaatcaggtgctgctgctacaggtgttcctagcgctgctggattggagatgtta
atgaacctgtttggtgggctcggtgctggcgggttggctgtttcgaacaatcccaacgtg
cccccagaagaactatacgcaactcaactttcacagctccaagagatgggcttcttcgac
acccaagagaacatcagagctctacgcgctacttccgggaacgttcatgctgctgtcgaa
cgactgctgggaaatctcgggcagtaa
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