Cucurbita pepo subsp. pepo (vegetable marrow): 111811769
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Entry
111811769 CDS
T05351
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111811769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111811769
04147 Exosome [BR:
cpep04147
]
111811769
04090 CD molecules [BR:
cpep04090
]
111811769
Enzymes [BR:
cpep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111811769
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111811769
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111811769
CD molecules [BR:
cpep04090
]
Proteins
111811769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
AAA_15
RsgA_GTPase
AAA_21
Zeta_toxin
DUF815
AAA_30
AAA_24
AAA_7
DEAD
AAA_23
DLIC
Motif
Other DBs
NCBI-GeneID:
111811769
NCBI-ProteinID:
XP_023554567
LinkDB
All DBs
Position
LG01:10286315..10291179
Genome browser
AA seq
1284 aa
AA seq
DB search
MERHEDAGNGLSSLSEPSSSSLNNGKQKGVGNKKKEPKSVSFLKLFAFADSYDFLLMSVG
SVGGIGNGVGMPLMTLLFGELIQTFGSNQDTHSIVSKVSKVCLKFVYLAVGVAVAAFLQV
CCWIVTGERQAARIRGLYLKAILRQDVGYFDKETSTGEVVSRMSGDTVLIQDAMGEKVGK
TVQLITNFIGGFTIAFIRGWQLALVMVSVIPLLVVAGATISRFMSQMAARGQSAYANAAN
VVEQTIGSIRTVASFTGEKQAISSYQKFLVDAYKSGVREALGGGIGIGTVMLVIFCTYSL
AVWFGGKMIIEKGYDGGQVITIILAVLEASMSLGQILPCFSAFAAGRAAASKMFETIQRK
PSIDVYDPKGKTLDDIQGDIDLKDVTFSYPTRPDEAIFSGFSLHIPSGTTAALVGESGSG
KSTVISLIERFYDPQSGEVLIDGVNLKEFRLRWIRAKIGLVSQEPILFTASIKDNIAYGK
DDATNEEIKSACELANAAKFIDKLPQGLHTLVGEHGTQLSGGQKQRIAIARAILKDPRIL
LLDEATSALDAESESIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVQKGSH
SKLVMDPSGAYSQLIRLQETNKDSEHASEVVNRTEFSLESMRQSSQRAHCLRSISRGSSV
AHSSRRSLSMFGLTSEHDLTDARDVKDMIEEQSKAPPVSLRRLAALNKPEMPMLLMGTIG
TVMCGVILPIFGLLLSNVIKTYYKPPEMLKKDTKCWAVIYIVLGVASLVAHPWRAYFFSV
AGCKLIEHIRSLCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAASVRALVGDSLSLNVGN
IATAIASLVIAFNASWELALVVLALVPLIGINSLIQIKSMNGFSNNSKSMYEEASQVAND
AVGGIRTVASFCAEDKVMDMYKTRCEAPLKSGIRQGLISGIGFGVSFFFLYNIYAITFYV
GARLVDSGRTTFTQVFQVFYALTMAATGITHSSSISQDTTKAKAAAASVFAILDRKSKID
PSDESGTILPDLKGEIELKHISFKYPSRPNIQIFGDLNLHIHAGKTIALVGESGSGKSTV
IALLQRFYDPDSGTITIDGVEIQKLQLKWLRQQIGLVSQEPVLFNETVRANIAYGKASEE
EIIRAAETANAHSFISGLQHGYETTVGERGVQLSGGQKQRVAIARAIMKNPKILLLDEAT
SALDAESERVVQEAVDRVMVNRTTVVVAHRLSTIMNADCIAVVRNGIIVENGKHEELITI
KQGFYASLIQLHASAVAPTPNSSS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggagagacatgaggatgcaggaaacggcctatcgtcgctatcagaaccgagcagctcg
agcttgaacaatggcaagcagaaaggagtggggaataagaagaaagaacccaaatctgta
tcttttcttaagctcttcgcctttgcagattcatacgatttcttacttatgtcagttgga
agcgttggcggcatagggaatggggtgggcatgcctctaatgactctgctctttggagag
ctcatccaaacgtttggaagcaaccaggatacccacagcatagtttctaaagtttccaag
gtgtgcctaaaatttgtgtacttggccgtgggggtggccgtcgcagcgtttctccaggtg
tgttgctggatcgtgacgggggagagacaggctgctcggatcagagggctgtatttgaaa
gctatattgagacaagatgtcggctactttgacaaagaaacaagcactggagaggttgtg
agcagaatgtctggtgatacagtcctaattcaagatgctatgggtgagaaggttgggaaa
actgtccaactaattacaaacttcattggaggcttcacaatagctttcataagaggctgg
cagctggctctggtaatggtatctgttatcccgcttcttgtggtagctggagcaacgatt
tctcgattcatgtcgcaaatggctgctcgagggcaaagtgcctatgctaatgcagcaaat
gtggttgaacagaccattggctcaataagaacggttgcgtcgtttacgggtgagaagcaa
gctataagcagttaccagaagttcctggtagatgcttataaatctggtgtgagggaagct
ctgggtggtggaataggaattggtacagtaatgctggtcatattttgtacttactcttta
gctgtttggtttggtggaaagatgattatagagaaaggatatgatgggggacaagtgatt
accatcattttagctgttttggaagcctcaatgtccctcgggcaaatattgccgtgcttt
agtgcctttgctgcaggccgagctgctgcctctaaaatgtttgagacaattcaaaggaag
ccaagcattgacgtctatgatccaaagggtaaaacattggatgatattcagggagacata
gatttgaaggacgtgactttcagctatccaaccaggccagacgaagccatattcagtggg
ttttctcttcacattcctagtggcactactgcagcattggttggggagagtgggagtggc
aagtcaaccgtgatcagtttgatagagagattctacgatccacaatccggtgaggtgctc
atcgatggcgttaacctgaaagagtttcgacttagatggattcgggcaaaaatcggtctt
gtcagccaagaaccaatactcttcactgcctcaattaaagataacattgcatacggcaag
gatgatgcaactaatgaggaaattaagagtgcatgtgaactagcaaatgctgctaaattc
attgacaaactgcctcagggattgcataccttggtgggggagcatggaactcagctgtcc
ggagggcagaagcagaggattgcaatagcaagggcaattctgaaagaccctcgaattcta
cttctagatgaagcgacgagtgcacttgatgcagaatctgaaagcattgtgcaagaggct
ctagataggataatggtcaatagaactactgtgattgttgcccatcgtttgagcacagtt
aggaacgctgatatgattgctgtaattcacagaggaaagatggttcagaaaggttcccac
tcgaaactcgtcatggatccgagcggcgcatattcacaactgatacgcctgcaggaaaca
aataaagactcggaacacgcttctgaagtcgttaaccgaacagagttttctctggaatca
atgagacagtcaagtcagagggctcattgtttgagatccataagtagaggatcgtcggtt
gcccacagcagccgccgatctttgtctatgtttggtttaacaagtgagcatgatctaaca
gatgctcgtgacgtaaaagacatgatcgaagagcagtcgaaagctcctcctgtttctctc
cgtcgccttgccgcacttaacaagccagagatgcccatgcttctgatgggaacaattggg
acagtgatgtgtggggtgatacttccaatttttggattactactttcaaatgtgataaag
acatattacaagcccccagagatgctaaaaaaggataccaagtgttgggctgtcatttac
atagtgcttggcgtggcctcattggtagcacatccatggcgagcatacttcttttcggta
gcgggatgtaaattaatcgaacacatcagatcactgtgtttcgagaaggtggttcatatg
gaggtgagctggtttgatgaggctgaacactcaagtggggccattggtgcaagactatcg
tcggatgcagcatcagtgagagcgctagtcggggattcgctctctctgaatgtgggcaac
attgcaactgcaattgcaagtttggtgattgcttttaatgcaagctgggaactggctctc
gtcgtcctcgctcttgttcctctcattggaatcaattcgcttatacagattaaatccatg
aatggatttagcaacaactccaagagtatgtatgaagaagccagccaagttgcaaatgat
gcagtagggggcataagaacagttgcttcgttctgtgcggaagataaagtgatggacatg
tacaaaaccagatgtgaagccccactgaaatcagggataagacaaggcctcatcagtgga
attggatttggagtgtcattcttcttcttgtacaatatatacgccatcacattctatgtg
ggagcccgtctggtggacagtggcagaacaacgtttactcaagtgtttcaagtgttctat
gcattgacgatggcagctactggaataactcactccagctcaatttctcaagatactacc
aaagccaaggctgctgctgcttccgtgtttgccatactagacaggaaatcaaagatagat
cccagcgatgaatctggaacaatattgcccgatcttaaaggagaaatagagcttaaacat
ataagtttcaagtatccttcgaggccaaacatccaaatattcggagacctaaacctacac
attcatgctgggaagacaatagctctggttggagaaagcggaagtggaaaatccacagtg
atcgcgctgttgcagaggttttacgatcctgactccggcaccataacgatcgacggagta
gaaatccaaaagctacaactgaaatggctaaggcagcaaataggtctagtgagccaagag
ccagtgcttttcaacgaaacagtacgagccaacatagcgtacgggaaggcgagtgaggag
gagataataagagcggcggagacggcgaatgcgcacagcttcataagcggactgcaacac
ggatacgagacgacagtgggggaaagaggagtgcagttatctggaggccaaaagcaacga
gtggccattgctcgagccatcatgaagaatccgaaaatacttctactggatgaagccaca
agcgcgctggacgcagagtcggagcgagtggtacaagaggcggtggaccgagtgatggtg
aatagaaccacggtggtggtagctcatcgcctctccacgatcatgaacgccgactgcatc
gccgttgttcggaatggaatcatcgtcgagaatggtaagcacgaagagctcatcacaatc
aaacaagggttttatgcctccttgattcagctccacgcttctgccgttgctcccactccc
aactcctcatcctaa
DBGET
integrated database retrieval system
