Corynebacterium phocae: CPHO_06120
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Entry
CPHO_06120 CDS
T05007
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cpho
Corynebacterium phocae
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpho03019
]
CPHO_06120
Enzymes [BR:
cpho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CPHO_06120
Messenger RNA biogenesis [BR:
cpho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CPHO_06120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
MTR4-like_stalk
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APT92533
UniProt:
A0A1L7D369
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All DBs
Position
1382340..1385096
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AA seq
918 aa
AA seq
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MTHLEQFAAELSHPLDPFQIEGCKAVEADHGVLVCAPTGAGKTIVGEFAVSLALSRGTKC
FYTTPIKALSNQKYHDLVAQHGEDAVGLLTGDVSINGHAEIVVMTTEVLRNMIYAESSAL
DRLTHVVMDEIHFLADSSRGVVWEEVILNLHPSVNIVGLSATVSNSEEFGQWLSTVRGDT
KVIVSEHRPVPLDQWMLVGRQIYPLFEPETGGAVNEQLVRKISRLEAGDTDRSEGFRNRS
REDSARSGAPRKQDRYRPLGRPEALRVLQDHSMLPAITFIFSRAGCDAALYQCLRSRMVL
TTEEESTQIKAIVDAGVEGIPEEDLQVLDFKRWRQALSRGFAAHHAGMLPAFRHIVEDLF
VKGLVRAVFATETLALGINMPARTVLLEKLVKYNGEAHVDLTPGQYTQLTGRAGRRGIDT
LGNAVVQWAPAMDPRAVAGLASTRTYPLNSTFAPGYNMAINLLGLMGFDESLRLIERSFA
QFQADGSVVEEANKIERAQQQVQEKRAELLAEVDALAPPVRDGEDPKELLVEYTDLRQEL
TAEERRSHADATAQRSQEVIKVLARLQLGEVIALPGKKRPILAVVCQPANQAQDPRPWVT
TEEGWSGRIDASGIANAPIVVGNMRLPRHIAKSPRRHSRQIVSEFRRGHFDRPRKMKAKA
RVRPSKKVGQLREAIRQHPVHGWPTDDREKLARLAQQVARKEREAQHLEAVVSKARDTLG
TTFARIVDLLSEMDYVEFEGYGQERHPVITEEGERLAQIHSEADLLVAQCLKRGIWNNLD
PAELAGVASMCIFENRKAISGTPEAATETMADAMDATMRIYSELTADEQRHRLPLTRVPD
PGFALAIHQWTAGAPLGYCMAAANESGAELSPGDFVRWCRQVIDLLQQVAKTGYEDEIRY
NARRAMDAIQRGVVAIGA
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaccttgagcagtttgcggctgagctttctcacccgcttgaccctttccagatc
gaaggctgcaaggcggtggaggcggaccacggcgtgctggtatgcgcgcccaccggtgcc
ggcaaaaccatagtcggtgaattcgctgtctctcttgccttatcgcgcggtacgaagtgt
ttttacactactcctatcaaggcgctgagtaaccagaagtaccacgatctagtggcccaa
cacggtgaggacgccgtggggttgcttacgggtgatgtatccatcaacggccacgctgag
attgtagtgatgacaactgaggttctgcgcaacatgatctacgcggaatcttccgccctg
gaccgtctaacccacgtggtcatggatgagattcactttttagcggattcctcccgtggc
gtggtgtgggaagaggtcattttgaacctgcatccctcggtcaacatcgtgggactttct
gccactgtttctaactctgaggaatttggccagtggctgtccaccgtgcgcggggatacc
aaagtaattgtgtctgagcaccgtcctgttccgttggatcaatggatgcttgttggccgc
cagatctatccactgttcgagccggaaaccggcggcgcggttaatgaacaattggttcgc
aagattagcaggctagaggctggggacacggaccgttctgagggcttccgcaaccgctca
cgggaggacagcgcgcgttcgggcgctccccggaagcaagaccgctaccggccactgggg
cggccagaagcactgcgggtgcttcaagaccactccatgctgcccgcaattactttcatc
ttctcccgcgcgggctgtgacgcggccttataccagtgtctacgctcccgcatggtcttg
accacggaggaagaatccacccagattaaagcaatagtggacgcaggggtggaggggatt
ccggaggaggacttgcaggtactcgacttcaaacggtggcgccaggcactctcccggggc
ttcgcggcccatcacgctggcatgttgccggccttccgccatattgttgaggacctcttt
gtcaagggcttggttagggcggtctttgccacagaaaccctggcgctgggaatcaacatg
cccgcgcgtactgtcttgcttgaaaaactggtgaaatacaacggtgaggcccacgtggat
ctcaccccgggccagtacactcagctcaccggccgtgcgggccgccgcggcatcgatact
ttgggcaacgcggtggtgcagtgggcaccggctatggacccgcgtgcggtggcgggcttg
gcctctacccgtacctacccgctcaattccacctttgcccccggctacaacatggccatc
aacttgttgggactgatggggttcgatgagtcgctgcgcctaatcgagaggtctttcgcg
cagttccaggcggacggctccgtggtggaggaagccaacaagattgaacgcgctcaacaa
caagtgcaggaaaagcgcgccgagttgctggcagaggtagacgccctggcaccgccggtt
cgcgatggggaggatcccaaagagttactggtggagtacaccgacttgcgccaggaactc
actgcggaggaacgtcgctcacatgctgacgccaccgcgcagcgtagccaagaagtcatc
aaggtcctagcccgcttacagctgggtgaggttatagccctacctggaaagaagcgcccc
attcttgcggtggtgtgccaaccggccaaccaagcacaggatccacggccgtgggtgacc
accgaggagggctggtccggcaggattgatgcttctggcatagccaacgccccgattgtg
gtggggaatatgcgtcttccacgccatattgctaagagcccgcggcgccattcccgtcag
attgtttctgagttccggcgtggccactttgaccggccgcgcaagatgaaagccaaggcc
agggttcgcccaagtaaaaaggtagggcagttgcgggaggccatccggcagcacccagtg
cacggctggcccaccgatgaccgggagaagttggcgcgcctggcccaacaggtggcgcgg
aaggagcgtgaggcccagcacttagaagccgttgtctccaaggcgcgggataccttgggc
accacctttgcgcggattgtggatctgctttcggagatggactacgtggagttcgaaggt
tacggccaggaacgccaccccgttatcactgaggagggggagcgcttagctcagattcac
tccgaggcggatctgctggtggcgcaatgcctcaagcgcggtatctggaacaacctcgat
cccgcggagctagccggtgtggcctcgatgtgtattttcgaaaaccggaaggcaatttcc
ggtactccggaggcggccacggaaaccatggctgatgccatggacgccaccatgcgcatc
tattccgagctaacggctgatgaacagcggcaccgcctgccgctgacccgcgtcccggat
cccggttttgccctggccatccaccaatggacggccggcgcgcccctgggctactgcatg
gcggcagctaatgaatccggcgcggagctaagccccggcgactttgttcggtggtgccgt
caggtaatcgatttgctgcagcaggtggccaaaaccggttacgaggatgagatccgatat
aacgcgcggcgtgccatggatgctatccagcgtggcgtggtagctattggtgcctag
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