Chitinophaga pinensis: Cpin_0997
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Entry
Cpin_0997 CDS
T00959
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cpi
Chitinophaga pinensis
Pathway
cpi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Cpin_0997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_0997
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Cpin_0997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ACU58495
UniProt:
A0A979G0C8
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All DBs
Position
1197580..1198374
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AA seq
264 aa
AA seq
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MRAVWSGTIGFGLVNIPIKLYSAVQDSRLDLDMLDRKDHAHIKFKRVNEDTGKEVPWEQI
VKGYLYNDEYVILEDEDFQEASPEKSKIITIESFVELVEIDDIYFETPYFIEPDKAGVKA
YDLLLKTLQKTGKAGLGRFVLRTSEHLAIIRPREDYLMLQQLRFSQEIRSPEELSFPSNT
KVSKKELDMAIQLVDSYTTEFDISQFKDTYHEELLKIIKAKASGKRRTVKKLKVVHTKSS
DLFSQLKASLNTSSSGKTTKKRAS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgtatggtcaggaacaatcggtttcgggttggtcaatatacccatcaaattg
tacagtgcagtgcaggacagcagactggacctggacatgctggacaggaaagatcacgcc
catataaaatttaaaagggtgaatgaagatacaggcaaagaagtgccgtgggaacagatt
gtgaaaggatacctgtataatgatgaatacgtcatcctggaagatgaagattttcaggaa
gccagtcctgaaaagagtaagatcatcaccatcgaatcatttgtagaactggtggaaata
gatgatatctattttgaaacaccctatttcattgaaccggataaagccggcgttaaagca
tatgatttgttgttgaaaacattgcagaaaacgggtaaggccggtctggggcgttttgta
ctcagaacgagtgaacacctggccattatccggccaagagaagattatctgatgttgcaa
cagctaaggttttcacaggaaatacgctctccggaagagctgtcttttccttccaataca
aaagtcagcaagaaggagctggatatggcgatacagttggtggacagttacacgactgaa
tttgatatcagccagttcaaggatacttatcatgaagaattattaaagatcattaaagca
aaagccagtggcaagcgccgcaccgttaagaaactgaaagtggtgcataccaagagcagc
gatctgttcagtcagttaaaggcaagtctgaatacctcctcgtcaggaaaaacaactaaa
aaacgtgcgtcatga
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