Chitinophaga pinensis: Cpin_2443
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Entry
Cpin_2443 CDS
T00959
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_2443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_2443
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_2443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HU-CCDC81_euk_2
HTH_Tnp_ISL3
HTH_23
HTH_11
Sigma70_ECF
HTH_DeoR
HTH_24
Phage_terminase
HTH_5
HTH_40
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ACU59932
UniProt:
A0A979GNU9
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All DBs
Position
3003009..3003608
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AA seq
199 aa
AA seq
DB search
MRPPDTEDNFSLFSAAKGDDTVAFKALYQRYWKKLYISACKRVDTDDAKDIVQDVMLTLW
RRKNEITIDSEEDLSRYLYSALRYRIISYYAFSSSTVQIPEWFDQPVHSSFESSFDVRKL
KDLIDGEVDRMPDRMQQIYHLSREEDLSVTDIAIQLNLSEQTVRNQLSLAMKRLRDLLRN
HHQSDLVICSLLVLDVFLN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaccagatacagaagataatttttcactgttctccgccgctaaaggggatgat
actgttgcatttaaagctttataccaacgctattggaagaagctttatatcagcgcctgc
aaacgcgtggataccgatgatgcaaaagatatcgtgcaggacgtcatgctgaccctgtgg
agacgaaagaacgaaattactattgacagcgaggaagacctcagccgttacctgtattct
gccctgcgctaccgcattatttcctattatgccttcagtagctctaccgtacagatccct
gaatggtttgaccagccagtacattcctcttttgagtcttcttttgatgtccgtaagcta
aaagacctgattgacggggaagtagaccgcatgcctgaccggatgcaacagatttatcac
ctgagtcgtgaggaagacctgtctgtaacagatatcgctatccagctcaatctctccgag
cagaccgttcgtaatcaactatccctggccatgaagcgcctgagagacctgctgaggaat
catcaccagagtgacctggtgatctgttcgttgttagtgttggacgtgtttttaaattag
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