Chrysemys picta (western painted turtle): 101933022
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Entry
101933022 CDS
T04662
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101933022 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101933022 (DDX46)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101933022 (DDX46)
Spliceosome [BR:
cpic03041
]
Complex A
U2 snRNP components
U2 related factors
101933022 (DDX46)
Complex B
101933022 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101933022
NCBI-ProteinID:
XP_008164637
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All DBs
Position
8:24946684..24983534
Genome browser
AA seq
1036 aa
AA seq
DB search
MGRESRHYRKRSTSRGRSGSRSRSRSPADKRTKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRERKRSRSRSRRSRSTSPNKNKKTENRSRSKEK
TEGVEVSKEKKKEKEDKEEEKDKDVSNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIG
ELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEADEIEDEELDPLDAYMEEVKEEVKKFN
MRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSSEEEEVDL
QTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTLDEVNVYRLEMEGIVVK
GKGCPKPIKTWVQCGISMKILSSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKT
IAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGFRVVCVYGGT
GISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQV
MRIVDNIRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQEVIVIEEE
NKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIIN
DFKNGVCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAFTFI
TEDQARYAGDIIKALELSGKPIPAELEKLWSDFKDQQKAEGKTIKKSSGFSGKGFKFDET
EHALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDMAAPGTSNVPTPTA
GNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVSAKT
IAEQLAEKINAKLNYVPIEKQEEEKQEGGQSESFKRYEEELEINDFPQTARWKVTSKEAL
QRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIR
LQNSYQPTNKGRYKVL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagagtccagacattatcggaagcgctccacatcacgtggacgttctggtagc
cgctctagaagtcgatctccagctgacaaaagaacaaaacgtggagaagacagacgttct
agaagtagagatcgagaacgcaggcgtgagaggtcacgcagcagggacaagaggagatct
cggtcacgggacaggaagcgcctgagacgttcaagaagcagagagagggaacggagcaga
gagagaagaagatcacgcagtcgagagaggaaacggtccagaagcagaagtagacggtcc
cggtccaccagtcctaacaagaacaagaaaacagaaaacagatcaaggtctaaagaaaag
acagaaggtgtggaagtttccaaagaaaagaaaaaagagaaagaagacaaagaggaagaa
aaggataaagatgttagtaactttgatcagaacaaactagaggaggaaatgagaaaacga
aaagagagagtggagaaatggagggaagaacagcgcaagaaggctatggaaaacatagga
gaactgaaaaaagaaattgaagagatgaaacaagggaaaaaatggagcttagaagatgat
gatgatgacgaggaggagactgcagaaggggaaaaagaagcagatgagattgaagatgaa
gaattagatccactggatgcttatatggaagaagttaaagaagaggtcaagaagtttaat
atgagaagtgtgaaaggtggaggtgggagtgaaaagaaatctgggccgactgttaccaaa
gtagtaaccgtggtgacaaccaaaaaggcagctgcggaatcagaaaagaagaaaggggag
ctcatggagaatgaccaagatgcaatggagtattcgtcagaagaggaggaagttgatctt
cagactgccctgacaggctatcagaccaaacagaggaagctgttggaaccagtggatcat
ggaaagatagaatatgagcccttcaggaaaaacttctatgttgaagtaccagagctggct
aaaatgaccctagatgaggtaaatgtatacaggctggaaatggagggcattgtagtcaag
ggaaaaggctgccccaagccaatcaaaacctgggtacaatgtggtatttccatgaagatt
ctcagttctcttaagaaacatggctatgaaaagcccactcccatccaaactcaggctata
ccagcaattatgagtggacgtgacttgataggcattgctaaaacaggaagtggaaagacc
attgcatttctgttgcctatgttcagacacatcatggatcagaggtcattagaagaagga
gaaggtccaatagctgtcatcatgaccccaactcgagagttggctttacaaattaccaag
gaatgtaagaagttctcaaagacacttgggtttagagttgtctgtgtctatggaggaaca
ggaatcagtgaacagattgctgaactaaaaagaggtgctgaaattattgtttgcacacct
ggacgtatgattgacatgttagcagctaataatggtcgggtgacaaaccttcgcagagtt
acatatgttgtattggatgaagcagacagaatgtttgacatgggttttgaacctcaggtc
atgcgcattgtagataacatcagacctgatcgtcagacagtcatgttctctgccaccttc
cccagagctatggaggcattagctcgccgaattctgaataagccaattgaggtacaagtt
gggggcaggagtgttgtctgttctgatgtggaacaagaggtgatcgtgatagaagaagag
aacaagttcttgaagttacttgagcttctgggacattatcaagagaaaggatcagtcatc
atatttgtcgataaacaggaacatgctgacgggctgctgaaagatttaatgagagcctct
tatccctgcatgtcacttcatggaggtattgatcaatatgacagagacagcataattaat
gattttaagaacggagtgtgcaaacttcttgtggccacatctgtagcagcacgaggcttg
gatgtaaagcaactaatgctggtagtcaattacagctgtcccaaccattatgaagactat
gtgcacagagcaggccgaactggacgagcgggcaacaaaggatttgcattcactttcatt
actgaagatcaagcacggtatgctggtgatataattaaggcattggaattgtcagggaaa
ccaattcctgctgagcttgagaagctctggagtgacttcaaagatcaacagaaggctgag
gggaagactattaaaaagagcagcggattctctggcaaaggattcaagtttgatgaaaca
gaacatgctttggctaatgagcgaaagaaactacaaaaagctgctcttggcttgcaggat
tcagatgatgaggataccgctctcgatattgatgaacaaattgagagcatgttcaattca
aaaaagagagtgaaagacatggcagcaccgggaacatctaatgttcctacaccaacagct
ggtaatgcagaaaaactggaaattgccaaaagactagctttaagaattaatgctcagaag
aatcttggagcagaggcacaagtattggtcccttttcactttaaggatgtgatgcagcag
gctacaaacgctatcttgagaggaggcacaattcaggctcctactgtatctgccaaaact
attgcagagcaactggctgaaaagataaatgccaagctcaactatgtgcccatagaaaaa
caagaggaagaaaaacaggagggaggacaaagtgaatcgtttaagagatatgaggaggaa
ttagagatcaatgacttcccacagactgctaggtggaaggttacctccaaggaagcactt
cagagaatcagtgaatattctgaagctgccattacaatcagaggaacgtatttccctcca
ggcaaggagcccaaggaaggagaacgaaaaatttacttggctatagagagtgccaatgaa
ctggctgtgcagaaagcaaaggcagaaatcactaggcttataaaagaagaacttatcaga
ctgcaaaattcataccagccaaccaacaaaggaagatacaaagttctgtaa
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