Chrysemys picta (western painted turtle): 101935270
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Entry
101935270 CDS
T04662
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03250
Viral life cycle - HIV-1
cpic04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101935270 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101935270 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101935270 (SAMHD1)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101935270 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
SAM_Ste50p
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
101935270
NCBI-ProteinID:
XP_005295484
UniProt:
A0A8C3I346
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MSRSGAAVAGGVAKRGRPASPPDGFCTPKKRVCAGWAMGPEGPHPRHWGTEQVCDFLCRN
GFSEPGLLRCFRENQITGAVLPYLTKSELKDLGVGPLDLRLKLIVCLQKLDQNHADIMKV
FNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVGYLAGC
LVRALHERQPELEINQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKHETAS
VQMFEHLITSNGLEKVMEDYGFVLKEDMDFIKEQIGGPLDKTPCRGLWPYRGRPEEKSFL
YEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVKNKKHICTRDKEVG
NLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPYIKIEGTGGKHYKISTAMEDME
AYTKLTDNIFLEILYSSNKELAEAREILHKIELRDLYKYLGETRTESGKEITEDQYDMLP
AHIVASRPKNAPQDVELNAEDFIVDVINMDYGMKEQNPIDKVRFYCKSDPSQAVKISKEQ
VSRLLPETFAEQLIRVYCKKKDEKSLDAATKCFIQWCMNMDFTKPQDGDVVAPELTPMKA
SWNDPDEDELQSPNDCREASKSRTRLFQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcggggcagcagtggccggaggcgtcgccaagcgtggtcggcccgccagc
cctcccgatgggttctgcacccccaagaagcgggtctgcgccgggtgggccatgggccca
gaggggccccacccgcggcactggggcaccgagcaggtctgcgacttcctctgccgcaac
ggctttagcgagcccggcctgctgcgctgcttccgagaaaatcaaatcaccggggcagtg
ctgccttacctcactaaatctgaacttaaagacctaggagttggacccttggacttgaga
ttgaaattgattgtttgcctgcaaaaactagatcaaaatcatgctgatataatgaaggtt
tttaatgatcctattcacggccatattgaaatacatcctctcctcgttcgaatcattgac
actcctcagtttcaacgcctgcgatatataaaacagctgggaggcacttactatgttttc
ccaggagcatcgcacaaccgctttgaacactccttgggggtaggctatctggcaggatgt
ctggtccgggcattacacgaaagacagccagagttggaaataaaccagcgagatattctc
tgtgttcagattgctggactttgtcacgatttgggtcatggaccattttcacacatgttt
gatggaagatttattccacttgctcgcccaggtctgaaatggaagcatgaaactgcttct
gttcagatgtttgaacacctgattacttccaatggactagaaaaagtcatggaagattat
ggttttgtcctgaaagaagatatggacttcatcaaagaacaaataggaggacccctagat
aaaaccccatgtcggggtttgtggccataccgtggtcgaccagaagagaaaagcttcctt
tatgagatagtggctaacaaaagaaatggcattgatgttgacaaatgggattactttgcc
agggattgccatcacttaggaatccagaataattttgattataagcgcttccttaaattc
gctcgggtctgtgaagtgaaaaacaagaagcatatctgtacccgtgacaaggaggttgga
aatctgtatgacatgttccatacacggaattgtttgcaccgcagagcttaccagcacaag
gttggcaacatcattgaaacaatgattacagatgccttcctaaaagcagatccctatatt
aaaatagagggcactggtggaaaacactacaagatttctacagcaatggaggatatggaa
gcttacactaagctaacagataacatctttctggagattctgtactctagtaataaagag
ctggctgaggcacgagaaattttgcataaaatagagcttcgcgatctatataagtatttg
ggagagactcgtactgaatcaggaaaagaaattacagaggatcagtatgacatgctgcca
gctcacattgttgcttccagaccaaagaatgcacctcaggatgttgaattgaatgctgaa
gactttatagttgacgttatcaatatggactatggaatgaaagaacagaaccctatcgat
aaagttcgtttctattgcaagtctgacccgagccaggcagtcaagatttcgaaagaacag
gtttccaggcttctgccagagacatttgcagagcagctgatccgggtttattgcaagaaa
aaggatgagaagagtttagatgctgcaacaaagtgttttattcagtggtgtatgaacatg
gattttacaaaaccacaggatggtgatgtggtcgcccctgaactaactccaatgaaagca
agctggaatgaccctgatgaggatgaactgcaaagtccaaatgattgcagggaagcttca
aaatccagaactagactctttcaataa
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