Chrysemys picta (western painted turtle): 101948264
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Entry
101948264 CDS
T04662
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03013
Nucleocytoplasmic transport
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101948264 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
101948264 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101948264 (THOC1)
03041 Spliceosome [BR:
cpic03041
]
101948264 (THOC1)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101948264 (THOC1)
Spliceosome [BR:
cpic03041
]
Complex C
Other components
EJC/TREX
101948264 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101948264 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
HsdM_N
Motif
Other DBs
NCBI-GeneID:
101948264
NCBI-ProteinID:
XP_008176876
UniProt:
A0A8C3IWK5
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSPPLFSLPEARLRFTNSTRDALTNKTIKPLLNAFSQIPGSENEKKCTLDQSFRVVLEEE
IINQASCENVLAIISLAINGVTDGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVTT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEQESTLGQKHIEERDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKLVYQ
LLSENPPDGERFSKMVEHILNTEENWNTWKNEGCPSFVKERPSDSKPTRLVRKRPAPEDF
LGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVEN
EYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKT
GEDEDEEDNDALLKENNESPDVQRDKPVTGGQIESFANKLGEQWKTLAPYLEMKDSDIRQ
IESDSEDVKMRAKQLLVAWQDQEGIHATPGNLITAMNKAGLSDLAESLTNDTENSS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctcttcagccttcccgaggcgcggctccgcttcacgaattctactcga
gatgctttgaccaacaaaactatcaaacccttattgaatgcattcagccagattcctgga
agtgaaaatgaaaagaaatgcaccctggatcaatctttcagagttgttctagaagaggaa
attataaatcaagcttcatgtgaaaatgtcctggctattatttctcttgctattaatgga
gttacagatggtatctgcacagcatcaaccccttttgtgcttctgggagatgttctggat
tgcctgcctttggatcaatgtgacaaaatttttacttttgtcgaaaaaaatgtcactaca
tggaaatcaaatacattttattcggctgggaagaattacttgctgagaatgtgcaatgat
ctcctaagaagattatctaaatcacaaaacacagtcttctgtggaagaattcagctattc
ctggctagattatttcctctttcagagaagtcaggacttaatttgcaaagtcagtttaat
ctggaaaatgtcacagttttcaatactaatgaacaggagagcactctgggacagaagcac
atagaggagagagatgaaggaatggaagtagaagaaggtgaaatgggagatgatgaagct
cctacaagttgctccattccaatagattacaacctgtatagaaaattctggtcgcttcag
gattactttaggaatcctgtgcagtgctatgagaagatctcgtggaagacatttcttaag
tactcggaagaagttttggctgtttttaaaagctacaaattggatgacacgcaggcctcc
agaaaaaagttggaagagctaaaaacagggggagaacatgtctactttgcaaagttctta
actagtgaaaagctaatggatttacagctgagtgatagtaacttccgccgtcacatcttg
ctacagtatctaatactatttcagtatctaaagggacaggtcaaatttaaaagttcaaac
tacgttctaactgatgaacagtccctctggattgaagatactacaaaattggtttaccag
cttctttcagaaaatcccccagatggggaaagattctcaaaaatggtagagcatatatta
aacactgaagaaaactggaacacctggaaaaatgaaggctgcccaagttttgtgaaagaa
agaccatcagattccaagccaacaagacttgtgagaaagaggccagctccagaggatttc
ctagggaaaggaccaaacaaaaaaattctcatggggaatgaggagctaactcggctttgg
aatttatgtccggacaacatggaagcttgtaaatctgagactagggaatatatgccgaca
ctggaagagttcttcgaagaggctattgagcaggcagatcctgaaaacatggttgaaaat
gagtataaggctgtgaacaattctaattatggctggagagcattaagattactagcacgc
agaagtccccacttcttccagccaaccaaccaacaatttaagagtttaccagaatactta
gaaaacatggtaatcaaattagccaaggagttgcctcctccttctgaagaaataaaaaca
ggagaggatgaagatgaggaagataatgatgctttattaaaggaaaacaatgaaagtcca
gatgtacaacgagacaaacccgtgaccggggggcaaattgaatcatttgctaacaagctt
ggagaacagtggaagactctggccccctacttggaaatgaaggactctgatataagacag
attgagtccgatagtgaggatgtgaagatgagagctaaacagctgctggttgcctggcag
gatcaagaggggatacatgcaacacctgggaatctgattactgcaatgaacaaagctgga
ttaagtgaccttgcagaaagcctaactaatgacactgaaaacagtagttaa
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integrated database retrieval system
