Chrysemys picta (western painted turtle): 101949155
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Entry
101949155 CDS
T04662
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X4
KO
K08133
collagen type XIV alpha
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpic00535
]
101949155 (COL14A1)
Proteoglycans [BR:
cpic00535
]
Extracellular matrix (ECM) proteoglycans
Others
101949155 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
Motif
Other DBs
NCBI-GeneID:
101949155
NCBI-ProteinID:
XP_008169860
LinkDB
All DBs
Position
Unknown
AA seq
1768 aa
AA seq
DB search
MKVCRYKIQSWFLLAFLAVTVHLISHVQGQESQFTCKTPAIADIVILIDGSWSIGRFNFR
LVRLFLENLVGAFNVASEKTRIGLAQYSGDPRIEWHLNAFSTKDAVLDAVRNLPYKGGNT
LTGLALTFILENSFKPEAGARPNVSKIGILITDGKSQDDVIPPAKNLRDAGVELFAIGVK
NADINELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTFVATLGA
PTDLVTSEVTARGFHVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSVSTAVLKNLMSL
TEYQIAVFAIYISAASEGLRGTETTLALPTASNLQLYNVSQSSMKAKWNGVAGASGYMIL
YAPLTEGQASDEKEMKIGEALTDIELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPL
SPPRNLRFSDIGHSTSRITWEPVSEKVNGYRIMYVKTDGTETNEVEVDRISTYTLKRLTS
LTEYTVAIFSLYDEGQSEPLTGSFTTKKVPAPQYLEIDEASTDSFRVNWKPISSDIARYR
LAWTPLNGGASEEVVLDGDKDTHVVEGLLSDTEYEVSLLAVYSDESESDVVAVLGTTLAR
TTTVSTSLATSTTATSRPTTAVFRTGIRNLVIDDETTSSLRVTWDISDYNVHQFRVTYLT
SKGDRAEEVVMVPGRQNSLLLQPLLSDTIYKVTVTPIYSDGEGVRVSAPGKTLPLSAPRN
LRVSDEWYNRLRISWDAPPSPTMGYRIVYKPINIPGPALETFVGDDINTILILNLFSGTE
YSVKVFASYSTGFSDALAGTAKTLYLGVTNLDAYQVRMTSVCAQWQLHSHATAYRIVTES
LVDGKKKEVTLGGGTPRHCFFELMPGTEYKISVYAQLQEIEGPGVSIMETTLPFPTQPPT
SPSTTAPPPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIIGFLYSTVGALDRIGPD
GTQVAIAQFSDDPRTEFKLNVYKTKETLLEAIQQIAYKGGNTKTGKAIKHAQEALFTTAS
GIRRGIPKVLVVITDGRSQDDVNKVSREMQLDGFSIFAIGVADADYSELVNIGSKPSERH
VFFVDDFDAFKNIEDELITFVCETASATCPLVYKDGNSLAGFKMMEMFGLVEKEFSTVEG
VSMEPGTFNAYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEI
LNEKYEPLVGVILDNDGKTLIFFNYDYKGDFQTVTFEGLEIKKIFYGSFHKLHVVISKTT
AKIIIDCKQVSEKTINAAGNITSDGIEVLGRMVRSRGQRDNSAPFQLQMFDIVCTTSWAN
RDKCCELPALRDEESCPSLPHSCSCSEFSKGPLGPPGPPGGPGVRGPKGHRGDQGPKGLD
GPRGEAGAPGPQGHPGPQGPSGLSIQGLPGTPGEKGEKGDRGLPGQQGVPGASGSPGRDG
TQGQRGLPGKDGPTGPQGPPGPVGIPGAPGVPGVMGNTGPQGGVGPPGAPGAKGERGERG
DIQSQAMVRAVAHQVCEQLIQGHMARYNSILNQIPSQSVSERTIPGPPGEPGRPGSPGLQ
GEQGAPGRPGFPGNPGQPGRPGERGLPGEKGERGNPGVGTQGPRGPPGPAGPSGESRTGS
PGPPGSPGQRGPPGHTGVPGPQGPSGQPGYCDPSSCAGYDVGGGYGDTTDQDIPVVQLPH
NSYQIYDPEELYDGEQQHYIVHGSYPQPAQYPQSSYPEPHLAQPEFTPVQEEMDAIEMRS
PGISRFRRQISKRSVNAPIRKRAIEKNT
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttgtcgatacaagatacagagctggttcctcttggcttttttagcggtcacg
gttcatctcatcagtcatgttcagggtcaagaaagtcagtttacatgtaaaactccagca
attgcagacattgtgatcctgatagatggctcatggagtattggcagattcaacttcaga
cttgtccggcttttcctggaaaatctggttggtgccttcaatgtggcttctgagaaaaca
agaataggtcttgctcagtacagtggggatccccgaattgaatggcatctgaatgccttt
agcacaaaggatgctgttttggatgcagtccgtaatctgccatataagggagggaataca
ttaacaggtcttgccttaacttttattttggagaacagctttaagcctgaagcaggtgca
agacccaatgtgtccaaaattggtatattgatcacagatggaaaatcccaagatgatgtc
atcccacctgctaaaaatctgcgtgatgctggtgttgaattgtttgctattggtgtgaag
aatgcagatataaatgaactcaaagagattgcctctgaaccagacagtactcatgtctac
aatgttgctgactttaacttcatgcacaccattgtagaaggtcttacgagaacagtgtgt
tcaagagtggaggaacaggaaaaggaaatcaaaggaacatttgttgccactcttggagct
cctacagatttggtcacatctgaggtaacagccagaggattccatgtcagctggacccat
gcacccggcaaggtggaaaaatacagagttgtgtactatcccactagaggaggccaacca
gaggaggtagtggtggatggaagtgtatcaacagcagttctaaaaaacctgatgtctcta
actgaatatcagattgcagtgtttgctatatatataagtgctgcaagtgagggtctccgt
ggtactgaaaccacacttgctttgcctacagcatcaaatctacagttgtataatgtgtca
cagagcagcatgaaagcaaagtggaatggagtagcgggtgcctctggttacatgatccta
tatgctccccttacggagggacaggcctcagatgaaaaggagatgaaaattggagaggcc
ttgactgatattgaactggatggattattgcctaacacagaatatacagtcacagtttat
gcgatgtttggagaagaagctagtgaccccctgacaggacaagaaacaacattgccttta
agtccacccaggaacttgagattttcagacattggacacagcacttccaggataacatgg
gaacctgtttccgaaaaagtaaatggttatcgtattatgtatgttaaaactgatgggaca
gaaaccaacgaggtggaagttgatcgcatttcaacatacaccctgaaaaggctgacatcc
cttacagaatatactgttgccattttttccctctatgatgaaggacagtctgagccgctg
actggcagctttactacaaaaaaagttccagccccacagtatttggaaatagatgaagca
tcaacagatagttttagagtcaattggaagcccatctcctctgatattgctcgctacaga
ttggcatggaccccactgaatgggggtgcatctgaagaggttgtcttagatggagacaag
gacacgcatgttgttgagggtttgttatccgatacggagtatgaagtttctttgctggca
gtttacagtgatgaaagtgaaagtgatgttgttgctgttcttggaactacacttgcaagg
accactacggtatctaccagccttgctactagtactactgcaacctccagacccacaact
gcagtttttcgaacaggaatcagaaaccttgttatagatgatgaaaccacatcaagcttg
agggtgacgtgggacatttcagactacaacgttcaccagttcagagtgacctacctcact
agtaaaggtgatcgtgctgaggaagtggtgatggtacctggaagacaaaacagtcttctt
cttcagccgctgctctcagataccatatacaaagttactgtcactcccatctattctgat
ggggaaggagtccgtgtctcagctcctggaaaaaccttgcctctttctgcccccagaaat
ttaagggtctcagatgagtggtacaaccgattacgtattagctgggatgcccctccgtca
ccaacaatgggttacaggattgtctacaaacctatcaatatccctggaccagcactagag
accttcgtgggagatgatattaacaccattctcattctaaatctgttcagtggaactgag
tatagtgttaaagtatttgcttcatactcaacaggcttcagtgatgccctagcaggcaca
gccaaaacattgtacttgggcgtgacaaatctggatgcatatcaagtgcgcatgactagt
gtttgtgcccagtggcagcttcacagtcatgctactgcatacaggatagtgacagaatcg
cttgtcgatgggaaaaagaaagaagtaacccttggtggagggacacctagacattgcttc
tttgagctcatgcccggcactgagtataaaatcagtgtctatgcccagcttcaggagata
gaaggccctggagtaagcatcatggaaactacattaccatttccaactcaaccaccgact
tctccttcaacaacagctccaccacctacaatccctcctgcaaaagaagtttgcaaagct
gccaaggctgacctggtgttcctagtggatgggtcatggagtattggagatgataatttc
aataaaataattggattcctgtatagcactgttggagctctggacagaattggtcctgat
ggaactcaggttgcaatagctcagttcagtgatgatcccagaacagaatttaaactgaat
gtgtacaaaacgaaagagactcttcttgaagccattcagcaaatagcgtacaaaggagga
aacaccaaaacaggcaaagcaattaagcatgcacaggaggccttgtttactactgcctcg
ggcataagaaggggtatccctaaggttttggtggtcattactgatgggcggtcacaggat
gatgtgaacaaagtctccagagagatgcaactagatggtttcagcatttttgctattggt
gtggcggatgcagattattcagaattagttaacattggcagcaagcctagtgaaagacac
gtcttctttgtggatgattttgatgcctttaagaatattgaagatgagctgatcactttt
gtctgtgaaaccgcatcagcaacctgcccattggtatataaggatggcaacagtttagca
ggatttaaaatgatggaaatgtttggtttggttgaaaaggagttttcgacagtggaagga
gtatctatggaacctggtacttttaatgcatatccgtgttacagactgcataaagatgcc
ttagtttcccagcctaccaaatacttgcaccctgaggggctgccttcagactacaccatt
acttttctcttccgtatactccctgacacaccccaggagccatttgctctgtgggagatt
ttaaatgaaaaatatgagccacttgttggagttattttggacaatgatggtaaaactctg
attttctttaattatgactacaaaggggattttcaaactgttacttttgaaggccttgaa
ataaagaaaatattctacggaagtttccataagttacatgttgttatcagcaagactaca
gccaaaattattattgactgcaagcaagtgagtgagaagacaattaatgcagcagggaat
attacttctgatgggatagaagtgctaggaagaatggtcagatcccgaggacaaagggac
aactctgcaccattccagttacagatgtttgacattgtttgtaccacctcctgggccaat
agagacaaatgctgtgaacttcctgccttgagagatgaggaaagttgcccatctcttcct
cattcttgctcctgttccgaatttagcaaaggaccactcggacctcctggaccaccgggt
ggtccgggtgtcagaggcccaaagggtcatcgtggtgatcaaggtccaaagggcctagat
ggacctcgtggtgaagctggtgctccaggaccccaagggcatccaggaccccaagggcca
agtggactttctattcaagggcttccaggaacaccaggtgaaaaaggagagaagggtgat
cgtggtctccctggtcagcagggtgtcccaggagcatcaggatcaccgggacgggatgga
actcaaggtcaaaggggtctgcctggcaaagatggacccacagggccccaaggtcctcct
gggccagtgggaatacctggtgctcctggtgttccaggggttatgggaaacactgggcca
caaggtggtgttggaccccctggtgctcctggtgcaaagggggaaaggggtgaacggggt
gacattcagtcccaggcaatggttcgtgcggttgctcatcaggtgtgtgaacagctcatc
caaggtcacatggccagatataattcaattctgaaccagattccaagtcagtctgtctca
gaacgaactattccaggacctcctggtgagccaggtcgaccaggatctcctgggttacag
ggagaacaaggagcaccaggaagacctggatttccaggcaatcctgggcagccaggaaga
ccaggagaaagaggtttaccaggcgagaaaggagaaagaggcaacccgggtgttggaaca
caagggcccagaggcccaccagggcctgcaggaccttctggtgaaagtcgaactggcagc
ccagggccaccaggatccccaggccaacgaggcccacctggtcatacaggtgttcctggt
ccacagggtccttctggccaacctggctactgtgatccttcttcttgtgctgggtatgat
gtgggaggtggatacggtgatacaactgatcaagacatcccagtagttcaattgccacat
aactcctaccaaatctatgacccagaggaactttatgatggtgagcaacagcactatata
gttcatgggtcctacccccaaccagcccaatatccccagtcctcctatccagaacctcat
cttgctcaaccagagtttactcctgttcaggaagagatggacgccatcgaaatgagatct
cctggaattagtcgtttcagaaggcaaatatcaaaaagaagtgtgaatgctccaatacgc
aagagggcaattgaaaaaaacacttaa
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integrated database retrieval system
