Chrysemys picta (western painted turtle): 101949928
Help
Entry
101949928 CDS
T04662
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpic04040
]
101949928
Ion channels [BR:
cpic04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101949928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
101949928
NCBI-ProteinID:
XP_042715432
LinkDB
All DBs
Position
2:complement(45589365..45681578)
Genome browser
AA seq
1889 aa
AA seq
DB search
MFIMCTILTNCVFMAIFDSPRKPKSPAAPEWNIYVEYTFTGIYTFEVLIKILARGFCLNE
FTFLRDPWNWLDSSVIAMAYVSIFSSLRSVSVLRTFRVLRALKTISIVPGLKVIVGALIQ
SVKKLTDVMILTLFCLSVFALVGLQLFKGNLRHKCVRRFNYTNGTITSDDKTWDSFDLFT
KDSENVLKKNDTTDSLLCGNGSDAGSCPDKYICLKVGENPDFGYTSFDTFGWAFLSLFRL
MTQDYWERLYQQTLRASGKIYMLFFMVVIFLGSFYLVNLILAVVAMAYQEQNKATIAETE
AKERKFREAMELLIKEQEALSDKGNDTMSLCSFEISSLPSKEVKDRSNLRKKNKSLGIED
YEEDQKIPKSQSSDDQRKSALLGLPYGASTNQMKHRLSHGNMFNFQISGRDIGSKADFRC
DEISSAGENEIQRGSLLVARTGRLPSVQSQMSHSSYPATPNCMQNGKCNSTDGYNGVVSL
MGGGSTRAYSLEPPAPEGLLLPPVMENPRIGDLSTLCDEASKMYLAPRLSVDYFNEPLQR
QRAASAISIITSVLEELEESQQKFPPCLKDFALKYLVWDCCPLWLRLKNKVTILVTDPFT
DLAITVCIVVNTIFMALEHHNMTRPFKFMLCVGNMVFTGIFTAEMILKIIALDPYYYFQQ
RWNIFDSLIVTISLIELIDFYLKAEKGRMLSILRSFRLLRVFKLAKSWPTLNTLIKIIGN
SVGALGNLTLVLAIVVFIFAVVGMQLFGGKYAEKCYEISEDCKPRWHFMDFFHSFLIIFR
ILCGEWIETMWGCMVVADKPLCLLVFLLVMVIGNLVVLNLFIALLLNSFSADNLQAPEDD
GEMNNLKIAFARIHRGLYLVKHATWDYCCGQCQHPKKAAKKKKKLAAKNTCLKARKEGKN
CKENHSNNGTEKNGDKCSVSILEDFITNPNMFVCVPIAEADSDSEHYEEDDDKPTTFSEI
EFSKQQENHLRQRGEQCKSPGVWSKGSEVFSEDLSEFNVCKQRKDESSQRQKEHLDDISC
SEGSTVDLTNPEEFLKQISELAEFVKEPDNCFPEGCVRHFPCCVVNTTKFPGKMWWNLRK
TCYKVVEHSWFESFIIFMILLSSGALAFEDIHLQKRKNIKTMLEFLDQVFTYIFVLEMFL
KWLAYGFRKYFTNAWCWLDFLIVDVSLVTLIDKFLGNSKIGAMKSLRTLRALRPLRALSR
FEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLLAGRFGKCVNMTEEKSVLNKS
IKNKQNCTAYNETQKIYWTNGKVNFDNVGSGYLALLQVATFKGWMDIMYAAVDSPGKEKQ
PRKEADLNMYLYFVVFIIFGSFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQRKYYNA
MKKLGSKKPQKPIPRPLNKYQGFLFDIVTSQAFDVIIMILICLNMISMMIETDDQSPEKT
YILNKINILFVVIFTVECIMKLLALRHYYFANGWNIFDLSVVIVSIVGSVLSNIVKVLEY
LFPPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MANFAYVKWESGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPFCDPKTKEV
VGECGKPVVGIIFFVSYIIISFLIVVNMYIAVILENFNVATEESTDPLGEDDFDMFYEVW
EKFDPEATQFIGYSALSDFADALAEPLRVAKPNKIELIAMDLPLVSGDRIHCLDILFAFT
KRVLGESGEMDTLKVQMEEKFMAANPSKLSYEPITTTIRHKQEEVSAIIIQRVYRSHLMQ
RSMKQASFLYCHRTCDGDILEDAPEKVNENYGRNLDKSETVSSTSFPPSYDSVTGTTDEH
LEVKMADSPQSVEPTNRPLSAEREEESIV
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgtttattatgtgcactattttaaccaattgtgtcttcatggctatatttgattctcct
cggaagcctaagtcacctgcagctcctgaatggaacatctatgttgagtacactttcact
ggcatttacacttttgaagtattgataaaaatattggcaagaggattctgtctgaatgaa
ttcactttccttcgagatccatggaattggttggattccagtgtcattgctatggcatat
gtatcgatatttagtagtctacgcagtgtttcagtccttcgcacattcagggttctgaga
gctttaaaaaccatttcaatagtcccaggactgaaggtcattgtaggtgcactgatccag
tctgttaagaaacttactgatgtgatgatcctgacccttttctgcttgagtgtctttgcc
ctcgtaggcctccagctctttaagggcaatttgagacataagtgtgtcaggcgttttaac
tacaccaatggaactattacttcagatgataagacatgggactcctttgacttgtttact
aaagattcagaaaatgttctcaagaagaatgacaccactgatagcttgttgtgtggcaat
ggctcagatgctggctcctgtccagataaatatatatgtctcaaagttggggaaaatcct
gattttggctacacaagttttgatacatttggctgggcctttctttccttgttccgcctg
atgacacaggattactgggagcgtctctatcaacagactctcagagcttctgggaagatc
tacatgctcttttttatggtggtcatctttctgggctcattttatctggtcaacttgatc
ctggctgtagtagcaatggcatatcaagagcagaacaaagctactattgcggaaactgag
gcaaaggaaaggaagtttcgggaagccatggaactgttaataaaagaacaagaggcattg
tctgataaaggaaatgatacaatgtcactttgctcttttgaaatctcgtctttaccctca
aaagaagtcaaagatagaagcaacttgagaaagaaaaataagtccttagggatagaagat
tatgaggaagatcaaaaaattcccaaatcacagtccagtgacgatcaacgaaagtcggct
cttcttggtcttccttatggtgccagtacaaatcaaatgaagcacaggctcagccatgga
aacatgttcaatttccagatatctggcagagacattggctccaaagctgattttcgttgt
gatgagatcagcagtgctggggaaaatgaaatccagcgtgggtcactgttggttgcacgg
actggaagactaccgagtgtgcaaagtcaaatgagccatagttcttaccctgctactcct
aactgcatgcagaatggcaagtgcaacagcacagatggttacaatggcgtggtttcatta
atgggaggaggaagcaccagggcatacagtctagaaccacctgctcctgaagggttattg
ctccctccagttatggaaaaccctagaataggtgatttgagcactttatgtgatgaggcg
agcaagatgtatttggcccctcgtctgtcagtggattattttaatgagccacttcaaaga
caaagggcagcaagtgcaatcagtatcattaccagtgtcctggaggaacttgaagaatca
caacagaaattccctccatgcttgaaagattttgccctaaagtatcttgtatgggactgt
tgtccactatggttgagactcaagaacaaagtgacaattttagtaacggatccatttact
gacctcgctatcactgtttgcattgtggtgaatactatcttcatggcactagagcaccat
aacatgacacgcccatttaaattcatgctttgcgtaggcaacatggtctttactggcatt
tttactgcagaaatgatcttgaaaatcattgctctagatccttattactattttcagcag
cgctggaatatttttgacagcttaattgtcaccatcagcttaattgaattaattgacttt
tacctaaaagcggaaaaaggaagaatgctatcaattttacgttctttcagactgctgaga
gtcttcaagctggcaaagtcctggccaactttaaataccctcattaaaatcattggtaac
tcagtgggtgccctgggtaacctcaccctggttctggcgatcgtagtctttatttttgcc
gtggtaggaatgcaactttttgggggaaaatatgctgaaaaatgctatgaaatatctgag
gattgcaagccacgttggcattttatggattttttccactcattccttattatattccga
attttgtgtggagaatggattgagaccatgtggggttgtatggtggtagctgataaacca
ctatgccttctagtcttcttgctcgtcatggtgataggaaacctagtggttctcaacctg
ttcattgcactactgctgaactccttcagtgctgacaacctccaagcacccgaagatgat
ggagagatgaacaatcttaagattgcatttgctcggatccacaggggactttacctggtg
aaacacgcaacatgggattactgttgtggacagtgccagcatccaaagaaagctgccaaa
aagaaaaagaaattggctgccaagaacacatgtttgaaggctcggaaagaagggaaaaat
tgtaaagaaaatcacagtaacaatgggactgagaaaaatggggacaaatgctcagttagc
attcttgaagattttatcaccaaccctaacatgtttgtctgtgtccctattgctgaggca
gattctgatagtgaacattatgaagaagatgatgataagccaaccacattctcagaaatt
gagttctctaaacagcaggaaaaccacttgaggcagaggggagagcaatgtaaaagccca
ggagtttggagtaaaggatctgaggttttctccgaagacttaagtgagtttaacgtatgt
aaacaaaggaaggatgaatcttcacaaagacaaaaagagcacctggatgacatcagctgt
tctgaaggcagcacagtggatctgacaaatcctgaggagtttctgaaacagatctctgag
ctggctgaattcgtaaaagaacctgataactgttttccagaaggctgtgttcgacatttc
ccttgctgtgtggtgaatactacaaagtttccaggcaaaatgtggtggaacctgaggaaa
acctgctacaaagttgttgaacatagctggtttgaaagctttatcatattcatgatcctg
ctgagcagtggtgccctggcatttgaagatattcatcttcaaaaaagaaaaaacattaaa
accatgttggaatttcttgatcaagtcttcacttatatctttgtcttggaaatgtttctg
aaatggctggcttatggcttcaggaagtatttcaccaatgcctggtgttggcttgatttc
cttattgtagatgtctctttagtaaccctcatagataagttccttggaaattccaaaata
ggagccatgaaatctcttaggactctccgagctttgagaccattaagagcattgtcacgg
tttgaagggatgagggtggttgtaaatgcattgataggagccatcccttccatcatgaac
gttctgcttgtctgccttattttctggctcatttttagtatcatgggagtgaacctattg
gcaggacgatttggaaaatgcgttaacatgactgaagaaaaatcagtattaaataaaagt
attaagaataaacagaattgcacagcctataatgagacacaaaaaatatattggacaaat
ggtaaagtcaactttgataacgttggttctggttatctggctcttcttcaggtggcgaca
tttaaaggttggatggacattatgtatgcagcagtagattcaccagggaaagaaaaacag
ccacgaaaggaggctgatctaaacatgtacctctattttgtggttttcataatctttgga
tctttcttcacactgaatctctttgtcggtgtcattattgacaattttaaccaacaaaag
aaaaagttaggtggacaagacatctttatgacagaagaacagagaaaatattataatgca
atgaaaaaactgggatccaagaaaccccaaaaacctatcccaaggccattgaacaaatac
caagggtttttatttgacatcgtaacaagccaagcctttgatgttatcatcatgattctc
atctgccttaacatgatcagtatgatgatagaaactgatgatcaaagtccagagaagact
tacattcttaacaaaatcaacatactctttgttgtcatctttactgtagaatgcatcatg
aaattattggctctaagacactactacttcgccaatggctggaacatttttgatttaagt
gttgtcatcgtgtccattgttggcagtgtgctctctaacattgttaaagtattagaatat
cttttcccacctacactcttcagagtcattcgcttggctcgaattggacgaatactaaga
ctcatccgagctgcaaaaggaattagaactctcctttttgccttaatgatgtcccttcct
gctctgttcaacattggcctcttactttttctggtcatgtttatttatgccatttttggc
atggctaactttgcttatgttaagtgggagagtgggattgatgacatgttcaacttccaa
acctttgctaacagcatgctctgtctcttccaaatcacaacatctgctggctgggatggt
cttctcagtcctattttaaacactggacctccattttgtgatccaaagacaaaagaagtt
gtgggagaatgtggtaaacctgttgtgggtattattttctttgtaagttacatcattata
tcatttctcattgttgtaaacatgtatatagctgttattttagagaacttcaatgttgcc
actgaggaaagtacagatcctctaggtgaagatgactttgatatgttttatgaagtctgg
gagaaatttgatcctgaggcaactcagtttattgggtattcggcactttcagactttgca
gatgctttggcagaacctttacgtgtagccaaaccaaacaaaattgagctcatagcaatg
gatcttcccttggtcagtggagataggatccactgcttggatattttgtttgctttcact
aaacgggtgctaggagaatctggggagatggatactctaaaagtacagatggaggaaaag
tttatggctgccaatccatccaagctttcttatgaaccaatcacaaccacaatcagacac
aaacaagaggaagtttctgccattattatccagagggtttacaggagtcatttgatgcaa
cgttccatgaagcaggcctcttttttatactgtcatagaacctgtgatggtgacatcctt
gaagatgctccagagaaagtgaatgaaaattatggtagaaatttagacaagtcagaaact
gtgtcctcaacatctttccctccatcctatgacagtgtcactgggaccactgatgagcac
cttgaggtgaagatggcagactctccgcaaagtgttgaacctaccaatcgtccactatct
gcagagagagaagaggaatccattgtttaa
DBGET
integrated database retrieval system
