Culex pipiens pallens (Northern house mosquito): 120416345
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Entry
120416345 CDS
T07310
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Pathway
cpii03022
Basal transcription factors
cpii03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120416345
09124 Replication and repair
03420 Nucleotide excision repair
120416345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120416345
03400 DNA repair and recombination proteins [BR:
cpii03400
]
120416345
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120416345
DNA repair and recombination proteins [BR:
cpii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120416345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
120416345
NCBI-ProteinID:
XP_039434008
LinkDB
All DBs
Position
2:204579014..204580704
Genome browser
AA seq
492 aa
AA seq
DB search
MSDSKSSKAASSSSSGTSSLIAKPANLECKNLEEYLRSRPPDALEKLYNYPAICLAVYRE
LPEIARQFVIRILFVEQPIPHAVVSSWGSQIYAKENTAVSKVLTELGVWRSTGLTGGLEG
WELCSTFKKNLKIALLGGGRPWSMSNALDPDQKSRDIEFLDGYAMSRWRCVLHYMVGAGS
SKGMEGEGISPDAVRILLHANLMKRDETDGSPVITRQGFQFLLLDTQAQVWHFMLQYLDT
CEARGLDLAECLSMLFQLSFSTLGRDYSSEGLSQGLLTFLQHLREFGLVYQRKRKEGRFY
PTRLAHNITSRNAVPTIQEDGSAAQDKGYIVVETNYRVYAYTDSNLQVALLGLFTELLYR
FPNLVVGVLTRDSVRQAFRGGITADQIISYLEQHAHPTMHNVEQTINTKSALPPTVVDQI
KLWENERNRFTYTEGVVYNQFLSQGDFNTLRDYAQSIGVMIWQNERTRTMVVTKNGHDDV
KKFWKRYSKGGG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccaagagctccaaggcggcgtcctcttcctcgtcgggcacgtcctcgctg
atcgccaagcccgcaaatctcgagtgtaagaatttggaggaatatctccggtcgcgcccg
ccggacgccctggaaaagctgtacaactatccggctatttgcctggccgtgtaccgggaa
ctgccggagattgcgcgtcagtttgtgatccggattctgttcgtggagcagccgattcct
catgcggttgtgtcgtcgtgggggtcgcagatttacgccaaggagaatacggctgtgtcg
aaggtcctgacggagttgggagtgtggcgcagcactgggttgaccggtggtttggagggt
tgggagttgtgttcgacttttaagaagaatctaaaaattgcgttgcttgggggaggtcgc
ccttggtccatgtctaatgcgttggatccggaccagaaatcgcgagatattgagtttttg
gatggttatgccatgtcccggtggcggtgcgtgctgcattacatggtcggagcggggagt
tcaaaggggatggagggagagggcatttcaccggacgcggtacggattttgctgcatgcc
aatctgatgaaacgggacgaaaccgatgggagtccggtgattacgaggcagggtttccag
ttcttgctgttggacacgcaggcacaggtgtggcactttatgctgcagtacttggacact
tgcgaggcgcgtggtcttgatttggccgaatgcctttcgatgttattccagttgagcttt
tccacgctgggtcgtgactacagttcggaagggttgagccaaggtcttttgacgttcctt
caacatctgcgagaattcggactcgtctaccagcgcaaacgtaaagaggggcggttctac
ccaactcgactagcgcacaacattacctcccgcaatgccgttccgacgattcaggaggac
gggtcggcggcccaggacaagggctacattgtggtcgagaccaattaccgcgtgtacgcg
tacacggattccaacctgcaggttgcactgctgggactgttcaccgagctgttgtaccgc
tttcctaatttggtggtcggcgtgctgacacgggactcggtccggcaggcgttccgcgga
ggcataacggccgatcaaatcatcagctacctcgagcagcacgcacatccgacgatgcac
aacgtcgagcaaacgatcaacaccaagtcggccctgccgccgaccgtcgtcgaccagatc
aagctgtgggaaaacgaacggaaccggttcacgtacaccgagggcgtcgtgtacaaccag
ttcctgtcgcagggcgacttcaacacgctgcgggactacgcccaatcgatcggggtgatg
atctggcaaaacgagcgcacgagaaccatggtcgtgacgaagaatggccacgacgacgtg
aaaaagttctggaagcgatactccaagggcggcgggtaa
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