Culex pipiens pallens (Northern house mosquito): 120418805
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Entry
120418805 CDS
T07310
Name
(RefSeq) cell adhesion molecule Dscam2 isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpii04515
]
120418805
Cell adhesion molecules [BR:
cpii04515
]
Immunoglobulin superfamily
DSCAM family
120418805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
V-set
Ig_5
Pur_ac_phosph_N
V-set_CD47
C2-set_2
NDNF
Motif
Other DBs
NCBI-GeneID:
120418805
NCBI-ProteinID:
XP_039437223
LinkDB
All DBs
Position
3:101246258..101414116
Genome browser
AA seq
1996 aa
AA seq
DB search
MMDVRGLLKASCLLYILRGVILLDLQGPLFLSEPLHRIEFSNNSGTHIECTGHGSPPPDM
EWSVATTNHELVYASPNGSLIFYPFTADKFRHEIHSTVYRCKLKNLVGTILSREVHVKGV
VNQKYNVQVHDEYVMSGNTAVLKCQVPSYILDYVQVTAWVQDSGVHLYPNTDIGGKYIVL
SNGDLYINNAGPSDAYKTYSCRTVNRLTGEIQISTYPGRVIVTEPKGLVQPRINVEKHSL
KHIVVNAQVTLPCVAQGHPVPTYRWFKEVKDQIIPLQLNERISIISAGLLKIAKARLEDS
GKYLCWVNNTAGEETIQVTLTVTAPLSAHLQPPVQTVDVSKDAQFQCIISGFPAHEVLWM
HNAKPIVRDSRIEIYTDTPRIVIKNVQKEDQGMYQCFVSNEWEQIQSTAELQLGDATPEL
IYWFSEQTLQPGPTVSLKCVGTGNPPPQFTWKLDGFPIPDNSRFVVGQYVTIHDDVISHV
NISNVKEEDGGEYTCVAQNSIGKVSHSARVNVYGAPYIREMPKITGVSGSDLVIKCPVAG
YPIDKIHWERDGQTLPINRRQRAYNNGTLIIEQLQRTEDAGTYTCMAQNKQKQTSRRNVE
IQVIVPPKIMPIQAMTNMLREGMRAAISCQILEGDLPVNFRWERNGKSILGTGNEVIRRL
DEYSASLVIEHITSEYSGNYTCIASNVAGSETFTVPLTVNVPPKWILEPKDSSAQAGQDV
ALHCQAGGHPKPTITWKKAIGNTPGEYKDFLYEPNVSLHANGTLEFRKITKESQGHFLCE
AKNSIGSGVSKVIFLKVNVPAHFNTKNKQITSPRNKQIHIQCNVQGDNPIDIKWKMQNSQ
QHIDESLDNRYNIREQVLDDGMVSELGISHTYRQDTGIYVCHATNAFGHDEMSIQLVIQE
VPEAPKNLRINSQQSRTLQLSWSQPFAGNSPIEKYNVEYKLVTDSWQSAEHITVAGTQTV
ITLQNLKPAKAYHIRISAENKLGASEYSEVIQVTTLEEVPSGPPLNIKGEPKSSTEIFLS
WEAPDREQWNGNLLGYYVGYQEASGPNDKDINPTQGFNFKTVEVRTHFGGETTLTNLNKC
TQYNIVVQAYTSQGSGPPSKEISLSTLEDVPSTPPDSPKCDVLSSTSIYITWSPPAAEGQ
NGKIKGYKVSYIEIDDLFEREPHTAKTNNQYMTLENLKKFTNYTFWVLAFTKVGDGVRTT
SFFCTTHEDVPSAPHAIKAVPASSNKIIISWLPPANRNGIITGYTFYMSLVDGGREEGSH
KRTLVPYAEIHETVRLQEHGTYQFWLTASTKIGEGEKSEIVTVPPNNKVPARIVSFSQEI
VTPWKETLVLPCRKVGVPAPVTIWRQDDQPMETGTRKLIAKNGTLYIKDCQASDAGNYTC
SVENNWGRDEIVYHIKIKVPPDPPSLSVINTYTDSLLLEWLDNRNGGSPILSYVINYKRE
NGDWEEIQIDSKTNTHLLVNLWCGTKYQLYITANNKIGTGLPCDIVHSQTKGLPPVQPKH
SQMITHNSTSVTCWLDSWGDGGCGILHFSVENRIYGRSQWVMISKHVDATERVYTVAELQ
PATKYQLRVTAHNNAGSTMAIYNYTTLTVAGVMVHPDLTNPVSPHLGDNPFYANFKVLLP
LFLSILILFALIAAALLIRKRKLNNQNRIPSTSMSESPSIANIQNKHNRDQQYLAVRAQQ
NSRNSNSVDSGSFKAEGNEYVEDICPYATFQLNKQTYSESSYSGNVYSGPYHSVRGSFVY
HDVKTENYHSNSQCEKPRTDPEKHKSNKEPEYTKVRRKGGSRLRDPTTSEPIDINQFIES
DNPGSTDSEVRKILTLHIPITEYDTLGSESDNDMASRSNQSNYRHHRDAQDETSSSSENS
PSSVSRKAKPPYPPRKSAKSAQNLTSQKRHVRSSSGYSSHNEETTFSISNYPNYSEHHIT
PPARFSDLLAGRDATLAVSSVNPSSATGLIQQLGGSAASEQLTVSTKKSSASTSSNHSPR
PRANQKLQREAFQINV
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtgcgtggtcttttgaaggcttcctgcttgttgtacatacttagaggtgtc
atcctgctcgatcttcagggaccgttatttctcagcgaaccgctgcatcgcatcgaattt
tccaacaattctggaactcacatcgagtgtacaggtcatggaagtccaccgcccgatatg
gagtggtcggtagcgacaactaatcacgagctggtgtacgcatcgccaaacggaagtctg
attttttatcccttcacggcggataagttccgccacgaaattcactccacagtttataga
tgtaaattaaaaaacttagtcggtactattttgagtcgcgaggtgcacgtgaaaggagtc
gttaatcagaagtataatgtacaagtacatgacgaatacgtcatgtcgggcaacacggcg
gttctgaaatgccaggtgcccagctacatcctagactacgtgcaggtcacggcctgggtg
caggactccggcgtgcacctgtacccgaacaccgacatcgggggcaagtacatcgtgctt
tcgaacggcgacctgtacatcaacaacgccggtcccagcgacgcgtacaaaacgtactcg
tgcagaactgtaaatagactaacaggagagatacaaatttcaacatatccaggtagagtg
atagtgactgagccgaaaggactagtacaacctagaattaatgtagagaagcactcgttg
aaacacatagttgtgaacgcacaagtgacgttgccttgtgtagcccaagggcacccggtg
ccgacgtaccggtggttcaaggaggtcaaagatcagatcatcccactgcagctgaacgaa
cgcatcagcatcatctcggccggtctgctcaagatcgccaaagcccgactcgaggacagc
gggaagtacctctgctgggtgaacaataccgctggcgaggagacaatccaggtgacgttg
acggtgacggcacctctttcagctcacctgcagcccccagtacaaactgtagatgttagt
aaggacgcccagttccagtgcatcatctcgggttttcccgcccacgaggtgctgtggatg
cacaacgcgaaacccatcgtccgggatagccggatagagatctacaccgacacaccccgg
atcgtgatcaagaacgtccaaaaggaggaccagggcatgtaccagtgcttcgtgtcgaac
gagtgggagcagatccagtccacggccgagctccaacttggagacgccactccggagctg
atctattggttctccgaacagacactccagccaggcccgaccgtatcgctcaagtgcgtg
gggaccggtaatccaccaccgcaatttacctggaagttggatggttttccgattccagat
aactctcggttcgtcgtcggtcagtacgtaacgatacacgacgatgtaatcagccatgta
aatatctccaacgttaaggaggaggacggtggcgagtacacctgtgtggcccagaacagc
atcggcaaggtgtcacacagcgcccgggtgaatgtttacggagctccctacatccgagaa
atgcccaaaatcaccggcgtgtccggcagtgacctggtgattaagtgtccggtggccggt
tatccgatcgataaaatccactgggagcgggacggtcaaacgttgcccattaatcgccgc
cagcgggcctacaacaatgggacactcatcatcgagcagctccagcggacggaggatgcc
ggaacgtacacatgcatggcgcagaacaaacagaagcagacctccaggcggaacgtcgaa
attcaagtcatagtgcctcccaagattatgcccatccaagcgatgaccaacatgttgcgc
gagggcatgcgggcggccatctcgtgccaaatcctcgagggtgaccttccggtcaacttc
cggtgggagcgcaacggcaagtccatcctcggcaccggtaacgaggtgattcgccgtttg
gacgaatactcggccagtctcgtcatcgaacatatcacctcggagtattcgggaaactac
acttgcattgccagcaacgtcgccggcagtgagaccttcacggtacccctaaccgtgaac
gttccgccgaagtggatcctcgaaccgaaagactcgagcgcccaggccggtcaggatgtt
gcgctgcactgccaagccggtggccatccgaagcccacaatcacgtggaagaaggccatc
ggcaacacacccggagagtacaaagacttcctgtacgaaccgaacgtatcgttgcacgcc
aacggtacgctggagtttcggaaaatcaccaaagaatcgcagggccattttttatgcgaa
gcgaaaaactccatcggttccggtgtcagcaaggtcatcttcctcaaagttaatgttcct
gctcatttcaacacgaaaaacaagcaaatcacttcacctcgcaataagcaaattcacatt
cagtgcaacgtccagggcgacaatccgatcgacatcaagtggaagatgcaaaattcccag
cagcacatcgacgaatcgttagacaaccggtacaacatccgggagcaggtgttggacgat
ggaatggtttcagagttgggaatatctcacacttaccgacaggacaccggcatctacgtg
tgccacgcaacgaacgcattcgggcatgatgaaatgtccattcagttggttatccaggag
gttcccgaggcgccgaagaaccttcgcataaattcccaacagtcgagaactcttcagctg
tcgtggagtcaaccgtttgctgggaatagccccatcgaaaagtacaacgtcgagtacaag
ctggtcacggattcgtggcaatcggccgagcacattaccgtggccggaacgcaaaccgtc
atcaccctgcagaatctcaaaccagcgaaagcatatcacattcgaatatcggccgaaaac
aagctgggtgcgtccgagtactcagaagtaatccaggtgacaaccctggaagaagtgcct
tccggtccaccgttgaacatcaaaggtgaaccaaagagttccaccgaaatcttcctctcg
tgggaagcgcccgaccgggaacagtggaacggcaacctgctgggctactacgtaggctac
caggaagcctccggtcccaacgacaaggacatcaatcctacccaaggctttaattttaaa
accgtcgaagttcggacgcattttggcggcgaaacgacgcttaccaatctcaacaagtgc
actcagtacaacattgtggtgcaagcgtacaccagccagggcagtggcccaccgagcaag
gagatttcattgagcaccctcgaggatgtgccttccaccccgccggacagccccaagtgt
gacgtcctgagctcgacgtcgatctacatcacgtggtcaccgccggcagctgagggacaa
aacggtaaaatcaagggctacaaagtgtcgtacatcgaaattgacgatcttttcgaacgc
gaaccacacactgccaaaaccaacaaccagtacatgacgttggaaaatctgaagaaattc
accaactacacattttgggtgctcgctttcacgaaggttggtgacggcgttcgaacgacg
tcattcttctgcacgacgcacgaagatgtaccatctgcaccgcatgctatcaaagccgtg
ccggcatccagtaataagattatcatatcgtggttgccacccgcaaaccggaacggcatc
atcaccgggtacacgttctacatgagcctggtagatggaggtcgtgaggaaggttcccac
aagcgtacgctggtgccatacgcagaaatccacgaaacggtacgtctccaagagcacggg
acgtatcagttttggttgaccgcgtcgaccaaaatcggggaaggcgagaaatccgagatt
gttacggttccaccgaacaataaggttcccgcgagaattgtatccttcagtcaggaaatt
gtgacaccgtggaaggaaaccctcgtgctgccttgccgaaaagttggtgttccggcaccg
gtcaccatctggcgtcaggatgaccaacccatggaaacgggcacgcggaagctgattgcc
aagaatggaaccttgtatatcaaggactgccaggcttccgacgctggcaactacacgtgt
agcgtcgaaaacaactggggaagggatgaaatcgtgtatcatattaaaattaaagtacct
ccagatccaccgagtctttcagtcatcaacacctacacggacagccttttactggagtgg
ttggacaacaggaacggtggctctccaatcctcagctacgtaatcaactacaagcgtgag
aacggggactgggaagaaattcaaatcgactccaaaaccaacacccaccttttggtgaat
ctctggtgcggtaccaagtaccaactgtatataacagccaacaacaaaatcggaactggt
cttccgtgtgacattgtccactcgcaaaccaaggggctgcctccggttcaaccgaagcac
tcgcaaatgatcacacacaactcaacgagcgtgacctgctggctggactcgtggggcgac
ggcggttgtgggattctgcacttttccgtcgagaatcggatctacggccgctcgcagtgg
gtcatgatttcgaagcacgtggatgcgacggaaagggtctatacggtggctgaactgcag
cccgcaaccaagtatcagctgcgcgtgacggcacacaacaatgccggatcgacgatggcc
atctacaactacaccacgttgaccgtggctggagtgatggttcaccccgacctgacgaat
cccgtttcgccgcacctcggggacaatccattttacgccaacttcaaggtcctgctgccg
ctgtttctctcgattctaatcctatttgcactgatcgcagcggcgcttctcatccggaaa
agaaagctaaataaccagaaccgaatcccgtcaacgtcgatgtcggagtcgccgtcgatt
gccaacatccagaacaagcacaaccgcgaccagcagtatctggcggtgcgggcccagcaa
aacagtcgcaacagcaattcggtcgattccggcagcttcaaagccgagggaaatgaatac
gttgaagacatttgcccgtatgcaacatttcagctgaacaaacaaacgtacagtgaaagt
tcatacagtggaaatgtttacagtggaccatatcattcggtaagaggatcatttgtgtat
catgatgtaaaaaccgaaaactatcattcgaacagccagtgcgaaaaaccaagaaccgat
cctgagaagcacaaatccaacaaagaacccgagtacacaaaagtacgcagaaagggcgga
tctcgtctgcgggatccgaccacctcggagccgatagatataaatcaatttatagaatct
gacaatcccggatccacagattccgaagttaggaagatactaacacttcatataccgatt
acagaatatgatacgcttggttccgagtccgacaacgacatggcctcgcgttcaaaccag
tccaactaccgtcaccatagagacgctcaagacgaaacatcttcgtcctctgagaattcg
ccttcgagcgtgtctcgcaaggcaaagccaccctacccgccgcgaaagtcggccaagtcg
gcccagaacctgacctcgcagaagcgtcacgtgcggagttcgagcggctactcgagccac
aacgaggagacaacgtttagtatatctaactatcccaattactccgaacaccacataacg
ccgccggccagattctccgatctgctcgccgggcgggacgccacgttggccgtctcgtcc
gtgaatccctcctcggccaccgggctgattcagcagctgggcggcagtgctgccagcgag
cagcttacggtgagcacgaaaaaatcgagcgcgagcacgagcagcaatcactcgccgcga
ccacgtgccaatcagaagcttcagcgcgaagcgttccaaatcaatgtgtga
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integrated database retrieval system
