Culex pipiens pallens (Northern house mosquito): 120422370
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Entry
120422370 CDS
T07310
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120422370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120422370
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
120422370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_14
TPR_1
TPR_8
TPR_12
TPR_17
TPR_11
ANAPC3
TPR_7
TPR_6
TPR_9
FAT
TPR_5
E_motif
Motif
Other DBs
NCBI-GeneID:
120422370
NCBI-ProteinID:
XP_039441713
LinkDB
All DBs
Position
3:complement(110267368..110271540)
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AA seq
1250 aa
AA seq
DB search
MSSKELKAALKEAREAVKNKKFSDAIKLCNKILREDKENYMALLLMGASYQETDKKEAAS
YLKRALEANSDQTVALQGLATCADDRDLPEVCEKLLALTPDKYGDMHGKLLGVASRGEQV
EKVLGIFERETSKEGEPDRVRSAFQCLSKVLLADPALEGKHETLVERTLEFEVDNPEDPF
LHDKFKRYLKLLYKLKLHEKLVRKACAMHDRFRNDNYPLEWICKVYAEELIDDCSMEKLL
TKPLQQYIDAAIEIKSDSALALVASGILNYRSGEMTRAKELLRKADSVQPNWSICLKVLA
EVYFREKAFGLAENIYRQLKIVNSNLFVALVEDGSVEKLQEASKYCVDLQKDCDDERFLF
YCAKMNLLLGNLGDFDGFMNKLKTLNVSQDRLDYLSALRLKSDGKPQEALEILQKHENSC
DCLLELAKLYYETQNVEQSFMAALRATKLDPNNAKCFHWLGKLYLHNADTARARKCLEKC
ISLNPAQKEAIILLSSLYRTLGEWDANSKLLQSSVALGATGSGSAWAHLQLGLHHLGQQK
HDEAIAAFRTVIRYDVANITAWEGLADAYMGRGSYSSAAKVFEKTAELKPENPYPKLQLA
NIKNILRQHRDAVALFEELLSTNEKYFPAVKGIAESYAGLCYYRLGQRLVGKARDHAQSA
VDYVTRAIKLKPNFVCLWKLLANVLDTVAEFPRPRSHLLIEGGLAGVAHRKNALLEGEKL
FELASRCYSRAIKINGDDSLLWYELALNHYRRATRFGTVREESVKKLSSAVEAAKQAIKL
EPSRWQNWNLLGVICANKEINNLALAQHCFIEAISVDKKTAAVGWSNLGVMYLLQGSIGL
ANKAFGRAQQTDTTCINAWIGQASIAEQMGHGEEAMDLFRHCTQLGYHPESALSYAHWVC
SVLSEEDYSKNKRNQFAIENMHALPLSHDSIQWHCIDKHDEASVEALSFLGNISSRLGLW
ATACEAYRKAAAKANGQQKDHILCDLGQCLLKRKLYSEAVECFQQVSEATYQATVGKALA
YFKAGQYQESYAEYEGALNWLATSDLEKAYVLIAMSAMVYAFQGEADAKTILFQCITLPE
PPIEALFSACALGLLHKDAVLTELVIKELRKYEDDPKHGHHVVYLVSQFYWANKQKSQSL
AYLVSQVHKWPARAKLRQVLAISLLKNHRTPKQNLIVASGIAQSALVLDLHDRQGSTRAE
DAAKWLAVASEAVRPVDERRRRVLAQKAVHVDPTCREAWSSLIRVLQAKK
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgaaggaactaaaagcggccctgaaggaggctcgcgaagcagtcaagaacaaa
aagttttccgatgccatcaaattgtgcaataaaatcctccgcgaggacaaggaaaactac
atggcccttctgctgatgggcgcttcgtaccaggagacggataagaaggaagcggcctcc
taccttaagcgtgccctcgaggcaaactctgaccaaacggtggcgttgcaggggttggcc
acctgtgccgatgaccgggatctgccggaggtttgcgaaaagttgctcgcgttgacgccg
gacaagtatggcgatatgcatgggaagctgctgggggtggccagcaggggagagcaggtc
gaaaaggtgttgggtattttcgagcgggagacgtcgaaggagggggagccggatcgcgtt
cgttcggcgttccagtgtctgtcgaaggtgctgctggctgatccagcgctggagggaaag
catgagacgttggtcgagcgaacgctggagtttgaggtggacaatccggaggatccgttt
ttgcatgataaatttaagcgatatttgaaactgttgtacaagctgaaactgcatgaaaag
ctcgtgcggaaggcttgcgcgatgcacgaccggttccggaacgacaactacccgctggag
tggatctgcaaagtgtacgccgaagagctgattgatgattgtagcatggagaagctgcta
acgaaaccgcttcaacagtacatcgacgcagcgattgagataaagtcggattccgcgctg
gcgctggtcgccagtggaatcttgaactaccgcagtggggaaatgaccagggcaaaggag
ttgctacgcaaggcggactcagttcaaccaaattggtccatttgtttgaaggtgctggcc
gaggtgtacttccgggagaaggcgtttgggctagcggagaatatctatcgtcagcttaaa
attgtgaattcgaatttgtttgttgctttggtggaggatggcagcgtggaaaagctgcag
gaagcttccaaatactgcgttgatttgcagaaggattgtgacgacgagagatttttattt
tattgtgcaaaaatgaatttgcttctgggaaatcttggagattttgatggcttcatgaat
aagctaaaaactttgaacgtttcccaagatcgtttggattacctgagcgcgttgcgattg
aaatccgatggtaagccgcaagaagcgttagaaatcctacaaaagcacgaaaacagctgc
gactgtctgctagaactagccaaattgtactacgagacccaaaacgtggagcagagcttc
atggccgcgctgagggcaaccaaactcgacccaaacaacgccaaatgtttccactggctc
ggcaagctctacctccacaacgcggacacggcccgagcgcgcaaatgtctggaaaagtgc
atcagtctcaatccggcccagaaggaagcgatcattctgctcagctcgctgtatcgcacc
ctcggcgaatgggacgccaactcgaagctgctgcaaagctcggttgcgctcggtgccacc
ggaagcggttccgcgtgggcccatctccaactcgggctgcaccatctgggccagcaaaag
cacgacgaagcaattgccgccttccggacggtgatccggtacgacgtggccaacatcacc
gcctgggagggcttggccgacgcgtacatgggccggggttcgtactcgtccgccgcaaag
gtgtttgagaagacggccgaactgaagccggaaaatccgtacccgaagctgcagctggcg
aatattaagaatatccttcgccaacaccgtgacgccgtggcgctctttgaggagctactc
tccaccaacgaaaagtactttcccgcggtcaagggcatcgccgagtcgtacgccggtctg
tgctactaccggctgggtcagcgcctggtcggcaaagcccgcgatcacgcccaaagtgcc
gtcgattacgtaacacgagcgatcaagctgaagcccaactttgtctgcctgtggaagctg
ctggcgaacgtgctggacacggtggcggaattcccacggccacggtcgcacctgttgatc
gagggtgggctggcgggggtggctcaccggaagaatgcgttgttggagggggagaagctg
ttcgagttggccagtcggtgctacagccgggcgatcaagatcaacggggacgacagtttg
ctgtggtacgagctggcgttgaatcactatcggcgggcgacgaggttcggaacggttcgg
gaagagagtgtgaagaagttgagttcggcggttgaggcagcgaagcaagcgatcaagttg
gaaccgagcaggtggcagaattggaacctgcttggggtcatctgtgccaacaaggagatt
aataatttggccttggctcagcactgttttattgaggcgatttcggttgataagaaaact
gcggccgtgggttggtccaacttgggtgtgatgtatttgctgcagggatcgatcggactg
gccaacaaggccttcggacgggcccaacagacggacacgacctgcatcaacgcttggatt
gggcaagccagcattgctgaacagatgggtcatggcgaagaggcgatggatctgtttcga
cattgtacacagctgggttatcatccggaatcggcgctaagttatgcgcactgggtctgc
tcggttctcagtgaggaagattacagcaaaaacaaacgaaatcagtttgcgattgaaaac
atgcacgcgctgccgttgtcgcacgactcaattcagtggcattgcatcgacaagcacgat
gaagcttccgtcgaggcgctcagcttccttgggaacatcagcagccggctgggactgtgg
gccacggcgtgcgaagcttaccgaaaagcggcggccaaagccaacggtcagcaaaaggat
cacatcttgtgcgatctgggccagtgtctgctgaagcggaaactgtactctgaagccgtg
gagtgcttccagcaggtcagcgaagccacctaccaggccacggtcggaaaggcgttggcg
tacttcaaggccggccagtatcaggaatcgtacgccgagtacgaaggcgcactaaactgg
ctggccacatcggacctggagaaggcctacgtgctgatcgcgatgtccgccatggtgtac
gcattccagggcgaagccgacgccaaaacgattctgtttcaatgcatcaccctacccgaa
ccgcccatcgaggctctcttttcggcgtgcgcccttggccttctgcacaaagacgccgtc
ctcaccgagctagtcatcaaggagctgcgcaagtacgaggacgatcccaagcacggccac
cacgtggtctacctggtgtcgcagttttactgggcaaataaacaaaagtcccaatcgctg
gcctacctcgtgtcccaggtgcacaagtggcccgcccgggccaagctgcgtcaagtctta
gccatctcgctgctgaaaaaccatcgcacccccaagcagaacctgatcgtggccagtggg
attgcgcagagtgcgctggtgctggatttgcacgaccggcagggcagtacgcgggccgag
gatgcggccaaatggctggcggtggccagcgaagcggttcggccggtcgacgagcggcgg
aggcgcgttctggctcagaaggcggtccacgtggatcccacgtgccgggaggcgtggagc
tcgttgattcgggtgttgcaggccaaaaagtga
DBGET
integrated database retrieval system
