Culex pipiens pallens (Northern house mosquito): 120427002
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Entry
120427002 CDS
T07310
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120427002
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120427002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
120427002
NCBI-ProteinID:
XP_039447752
LinkDB
All DBs
Position
3:complement(179454818..179500377)
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AA seq
809 aa
AA seq
DB search
MEPYSALGKSVVRIRRKCLGDHIVEKLSVLFGVQLGPELAPVRPEEVGQFATFHVYSEQL
SGSVVGGDSQLGDVRGGAAGGVSGDLISQIQQYLDSLCVTEAEDSSYDSDCDGDDLSHQQ
VSRTTSDTLGQEFAEYVSSHTATADQSFHQDRSPGYTQRVEFALKLGYTERLVQAALQRL
GPNPAQNELLAELIKLGSQPGVKGTTGEFIAGDGGDSLLAASTEYGVPGLLLVPTGPGSG
SSVSASEESLRPIVIDGSNVAMSHGNKEVFSCRGIRLCVDWFKNRGHKDITVFVPKWRKE
SARPDNPVKDGEILNELEKERMLVFTPSRLVGGKRMVCYDDRYILKLAAENDGIVVSNDN
YRDLVQESSEFKKVVEERVLMYSFVNDRFMPPDDPLGRSGPTLDIFLRVRKGDPPPPCPY
GKKCTYGNKCKFYHPERGSMPHKSVTERLSEYAARHLQARSAADVAGCSSGGGRNAIQGK
SLSVPLSNSSSETSPINEKRKPLCRTRSNVPPETGSSSVSNMFNMSQGDQQQQHQHLQQN
PYMPTPNRSNWDISPLSLPPHSLVDSQIFPKSHSIENISKETYTQLQHSYSASLWNRQQQ
QQQQQQQAQSQQQQKSESCEPGLDPTVNLHRKLQRQLTLNPAGCDPRIYQMQRNVGHQQQ
TPQHHSAVQLSPHRPLAPSLSGGARPNPAQWELHQNVTRIASAPDPSRPWHTGPPPASSS
EPHINLWPPPQNSASSGVIGPPQQQQPTTSQQQQQQQVHQQLQDQRRRLHYHLASIFPED
QVQSVMQMYPDETNPQKICAAILAMFPKM
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgtattccgccctgggaaaatccgtagtccgaatccgtcggaagtgtctcggg
gaccacatcgtcgaaaagttgtcggtgctgtttggggttcagctgggccccgagctggct
ccagtgcgccccgaagaggtcggccagtttgcgacgtttcatgtgtacagtgagcagcta
tccggaagtgttgttggaggcgattcgcagcttggcgatgtccgaggtggggcagcagga
ggtgtgagtggtgatctaatcagccaaatacagcaatacctggactcgctatgtgtgacc
gaagccgaagattccagctatgacagcgactgcgatggggacgatctgtcccatcagcag
gtgtcccggaccaccagtgacacgctgggtcaggaatttgccgagtacgtcagcagccat
accgcaacagcagaccagtcattccatcaggacagatcacccggctacacgcaacgggtg
gagtttgccctcaaactgggatataccgagcggctcgtccaggccgctctccagcggttg
ggcccaaacccggcccagaacgaactgctggccgagttgatcaagctaggctcgcagcct
ggcgtgaaaggaacgaccggtgagttcattgccggtgatggcggtgactcgctgctagcg
gcatcaaccgagtacggcgtgccgggactgttgctagtgccaacgggaccgggaagcgga
tcgagtgtcagtgccagtgaagaatctctacgtccaatagtgatagacggtagcaacgtg
gccatgagtcacggcaataaggaagtgttttcgtgtcgaggcatacgcctttgtgtggat
tggtttaagaatcgtggccacaaggatatcaccgtgtttgtgcccaagtggcggaaggaa
agtgcgcgcccggacaatcctgttaaggacggtgaaatactgaacgagctggaaaaggag
cgcatgttggtgtttaccccgtcccggttggtgggaggaaagcggatggtgtgctacgac
gatcggtatattttaaagctagcagcagaaaatgacggcatcgtggtttcgaacgacaac
taccgcgacttggtgcaggagagctccgagttcaagaaggtggtcgaagagcgcgtgctg
atgtactcgttcgtgaacgatcgcttcatgccaccggacgatccgctcggccggtccggg
cccacgttggacatcttcctgcgggttcggaagggcgatcctccgccaccgtgtccgtac
gggaaaaagtgcacctacggaaacaagtgcaagttttaccacccggagcggggcagcatg
ccgcacaagtcggtcacggagcggctgtccgagtacgcggcgcgacatctgcaggcgcgg
agtgcggccgacgtggcgggttgttcgagtggtgggggacggaacgccatccagggcaag
tcgttgagcgtacctctgtccaacagcagtagcgaaactagtccaatcaatgagaaaagg
aagcctttgtgtcgcacacgatctaacgtacctccggaaacgggcagctccagtgttagt
aatatgttcaacatgagccagggtgaccagcagcagcagcatcagcatctgcagcagaat
ccgtacatgccaacgccgaatcgatcaaactgggacatttcgcctctctcgttgccaccc
cacagcctggtggattcgcagatattccccaaatctcatagcatagaaaatatatccaag
gagacgtacactcagctccagcatagttacagtgcatcactgtggaatcggcagcagcaa
cagcagcaacagcagcagcaagcacaatcccagcagcagcaaaagtcggagtcgtgtgag
ccgggcctggatccgaccgtgaatttgcaccgaaagctgcagcgccagttaacactcaac
cctgccggatgtgatcctcgaatctaccagatgcagcgcaacgttggccaccagcagcag
acacctcagcaccactcggccgtccagctgtccccgcatcgaccgttggccccttcgctg
agcggtggagcccgacccaatccggcgcagtgggaacttcaccagaacgtgactcgcatc
gcatcggcgcccgatccgtcccgtccctggcacaccggaccgccgccagcgtcgtcatcg
gaaccacatatcaacctgtggccaccgccgcagaattcggccagttccggcgtcatcggt
ccaccccagcagcagcagccaacaacctcacaacagcagcagcagcagcaggtccatcaa
cagctccaggaccagcggcgccgtttgcactaccatctggccagcatcttccccgaggac
caggtgcagtccgtgatgcagatgtacccggatgagaccaatccgcagaagatttgcgcc
gccattctggccatgttcccgaagatgtaa
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