Culex pipiens pallens (Northern house mosquito): 120431266
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Entry
120431266 CDS
T07310
Name
(RefSeq) protein rotatin homolog
KO
K16484
rotatin
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpii03037
]
120431266
Cilium and associated proteins [BR:
cpii03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120431266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
120431266
NCBI-ProteinID:
XP_039452333
LinkDB
All DBs
Position
2:169698332..169718219
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AA seq
2127 aa
AA seq
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MTLVINHDMLAKLSHEIQEIRVRTLHDIENKVKRALWERHELKFSPSSLVKNLIRWFGKV
PLCEEAAVLELMSLLLTSHHGLEIVNHFTTSRLVKELGKVKYLIGAKPELSELVDNVIQQ
VQSFKAVERGPRSDPAASIAESLASLKIECVDLTDSPRQSVSPHVPTGSAYPPQGRSLNY
FVRCWEIPLPSDGQILKGLSESLHPEGDEKEIARALNFLVPSINDYPPEFFLQPPYIFHS
LMKLLDARRVSMSNTIELFHRLAIAVQKRIKALQLTSMYTYQDPKSECAQESQVVQISVP
AFVHELFMVGIGCLKEVSDQLDLQETNKTFNLFHDLITLASSEPLESCQYREIRHELGYL
VKHFRQCWESNSGCFATRTKYLVTVNIFSKFLQLSTDDESPTTELNANDTCFPHKPHYNP
AEFETMNSTNHRKLLEETDQNWLHELQIAALDYPARHIYPSIYEPVLEKALKCSDSRRLQ
VILGADELLEPAVRILRQPTALTDEELIFVGLEAIDTLHLHRSVAMVKLLVKAVGKCQIY
FEGNLKLRDAAEKLVLRLLSHSDEQVKSTAYDQCAAVIGDYISSLDEGAILTRRKSFPKT
SSSSSKLSSLGIPLSVEILVEVICFGYCSTNKKIQQQAETILLFVLNSRVNLLERWTDLL
DVILPVLPLLQTVAMISKHSTLSRAIITLLHPDSGIPLPDMIRGNLRFLFQDDGEIREEA
LTRVLFLMTLPGNARQYAPNIEHIRDTISNGICVMKSKYDVGKHLSSDVYEVSAVRPLLD
ALEQENCDPAIRRSALVQLNVMAEDPILCEIIHKANGWAFVLQVLDNAMREEHYLDYPDS
AVPAVGILNKLCFAIPEFRRFLADNVSVYYLITRALLTYHHLNIFKPDCCSLLFQLLFSD
YALGCGKSVSLPVICNRYRIPFVCEYHWKCSPFHELSYLEEIFVDVQPGGEDRPVEGASI
IRLNQNCGVECATSRLRTTQPEQPSLNQTSETFASPEGYRQVAWQYLRLSFACTWFDAFE
NILVNAKRSRKSPKSGGEDLAVIDYSLLPPHLVAVRQANDDDDAEVIDLEDHSLRFDRAL
QLTKADINMIRTTHADEIFRNSLKNIAAAGSHAEVSIGLSGLESNLILPMEGQIMHNSIV
KHLKKFVLTPPNTAADERLLIDVIGLLGDLIQIGYENVLVWIVTLLFEQTSIFNQLLKSE
TCSGELFMKNVDFIKLVLMEALTSEHPEVRSLLTSEEGFEIKVKKEHNFNLFNKLFEVIT
DRLDKDLQKCDLHRILSLVGLVRVVVRSGLFEFENKFLNHVINKLCSYITLIRSITHSGS
TITKSCLIVMSTLLDRMKDIHLKAKHFKIIALQCSHTHPLIRSCAWNVLAKIAKTLSGAH
SIIKECAYLPGGIHASCAKTLLDPEEAALVKESATGLLINLLSHRAEKNGSLHKFVLPYD
KGGNSQQDGDPLQTVLGILKKHRFFEYALESLQNFTTQDEMSVGEFAGVQLVTCDVVKSY
AMIFSCLVDLNSELIDLLVQKCCLQQLMNCVSKVPILPGRSALLMVSEVCNLLVRCVTLR
RDEICELISPYHAVIGGIIYLLNVDLYRGVGDPVLREVTGKIMHLLNALALHKVGNQMIT
GVLSELKLEPVVNVIVKGIANHKHKDYQIACLRFLTVLVLTSDINISPTSEFQSFLGLLD
TTQLTAVDIPVKRISDPKPNRFIAQPFDEFSPDEDRENRDPNGRQRVATSGELEIAAKPL
RTGSEQIFATLILQFELICARDKPENGALVSTLQKRTLFSAVQVMLRQSEQARKVARSRK
FLEVLLDRLDALYAGVGLSYQDFVKKNGDAKKTPIVDELSFIAGILSSWFLNDILVHQAN
INRIYKLFLQFWQWISNNRELENEFMKALVCLTENSIVVCKTFATTPPPGHPHSILKLVI
AVATAETGKVKGPKSELTLLTLCLRMLINSCACHEGRVMIAKYNVLDNLCKLHPAHTKLQ
KPWLTVTKLWLEFWEVYTRHNDVTEVKHLTVLGALIRKSTPDLRLLALEIMRNMSYVPSN
RPALLSSQDYMYALKSVLDGTDPTEQLIVVSSVWKMVANSHKAKGAIKSSPLPRRLNALL
QQRSLRENCEDDDLFNVLNIVVKLLNS
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgttataaaccacgatatgcttgccaagttgtcccacgaaattcaggagatt
cgcgtgcgaactttgcacgacatcgagaacaaggtgaagcgcgccctgtgggagcggcac
gagctcaagtttagccccagctcgctggtcaagaatctgatccgctggttcgggaaggtt
cccctctgcgaggaggcagccgtgctggagttgatgtcgctgctgttgacgagccaccac
ggtctcgaaatcgtcaaccacttcaccaccagccgcctggtcaaagaactcggcaaggta
aaatacctcatcggtgccaaacccgaactttccgagctggtcgacaacgtgattcagcaa
gtgcaaagcttcaaagccgtcgaacgtggaccacgatccgatccggccgccagcatcgcc
gaaagtttggccagcctcaaaatcgagtgcgtcgacctgacggactcgccccggcagtcc
gtgagtccccacgtgccgacgggttccgcgtatcctccacaggggagaagtttaaattac
tttgtgcggtgttgggagattccgctgccctcggatgggcagatcttgaaggggctgagt
gaatcgctgcatccggagggggatgaaaaggaaatcgcgcgtgcgttgaactttttggtg
ccgtcgatcaacgattatccgccggagttttttctgcaaccgccgtacatttttcactcg
ttgatgaagctgctcgatgcgaggagggtcagcatgagcaacactattgaactgttccac
cggttggcgatcgcggttcagaagaggattaaagcgcttcaactgaccagcatgtacacg
tatcaggatccaaagagcgaatgtgcccaagagtcgcaagtcgtccagatttccgttccc
gcctttgtgcacgagctgttcatggttggaattggttgtctgaaggaggtgtccgaccag
ctcgaccttcaggaaaccaacaaaacgttcaacctctttcacgatctcattacgttggcc
tctagcgaacccctagaaagctgccagtaccgtgaaatccgccacgaactcggctacctg
gtgaagcacttccggcagtgttgggagtccaacagcggctgcttcgccactcgcaccaag
tacctcgtcacggtcaacatcttctccaagtttctccaactgtcaaccgacgacgaatcc
ccaaccaccgagctcaacgccaacgacacctgcttcccgcacaaaccgcactacaaccca
gccgaattcgaaaccatgaactcgaccaaccaccgcaagctgctcgaagaaaccgaccaa
aactggctgcacgagcttcagatagccgctctggactatccggcgcgccacatctacccc
tcgatctacgaaccggtgctggagaaggcactcaagtgctcggacagtcgccgcctgcag
gtgattctcggagcggacgagctgctggagccggctgtgcggattctgcgccaaccgacg
gcgctgaccgatgaggagttgattttcgtggggttggaagcgatcgatacgctgcatctg
caccggtccgttgcgatggtgaagctgctggtgaaggcggtggggaagtgtcaaatttac
tttgagggcaacctgaagcttcgtgatgccgctgaaaagcttgtgctgaggctgttgtcg
cactcggatgagcaggtcaaaagcaccgcctacgaccagtgcgccgccgtaatcggcgac
tacatcagctcgctggacgagggcgccatcctcacccgccgcaagtccttccccaaaacc
agcagcagcagcagcaaactgtcctcactgggaattccactctccgtggagatcctggtc
gaggtcatctgcttcggctattgtagcaccaacaagaagatccaacagcaagcggaaacc
atcctgctgtttgtgctcaactcgcgggtcaacttgctcgaacgatggaccgacctgctg
gacgtgatcttgcctgtgcttccgctgctgcaaaccgtggccatgatcagcaaacactcg
acgctgtcgcgcgcgatcattacgttgctccatccggattccgggattccgctgccggac
atgattcgggggaacttgcgctttttgttccaggacgacggggagattcgggaagaggcg
ttgacgcgggttctgtttttgatgacgcttccggggaatgctcggcagtacgcgccaaac
atcgagcacatacgggatacgatctccaatgggatttgcgtgatgaagagcaagtacgac
gtcgggaaacatctgtcgtcggacgtgtacgaggttagtgcggtgcggccgctgttggat
gcgctcgagcaggaaaactgcgatccggcgattcgacgcagcgcgttggttcagttgaac
gtgatggccgaggatccgatcttgtgcgagatcattcacaaggcgaacgggtgggcgttt
gtgctgcaggtgttggacaatgccatgagggaggagcactacttggattatccggacagt
gccgttccggcggttggaatcttgaacaagttgtgctttgcgatcccggagtttcggcgg
ttcttggcggataacgtgagcgtgtactacttgatcacgcgggcgttgttgacgtaccat
catctgaacatcttcaagccggactgttgctcgctactgtttcaattgttgttcagcgat
tacgctcttgggtgtggaaaatcggtatcgttaccggtgatctgcaaccggtaccgaatc
ccgttcgtctgcgagtaccactggaagtgcagtccatttcacgagctcagctacctggag
gagatcttcgttgacgttcaacctggcggtgaagatcgtcccgttgagggtgccagtatc
atccgtttgaaccaaaattgcggagttgagtgtgcgacatctcgacttcgaaccacacaa
ccagaacaacccagcctcaaccaaacctctgagacgtttgctagcccagaaggttaccgc
caggtcgcgtggcaataccttcgcctctcctttgcctgcacctggttcgacgcgttcgaa
aacatcctggtgaacgcgaaacgatcgcgaaaatctcccaaatccggcggtgaagatctg
gccgtgatcgactactccttactgccgccgcacctcgtagcggttcgtcaagcgaacgac
gacgacgacgcggaagtgatcgacctggaggatcacagcttgcggttcgatcgcgccctc
caactcaccaaagcggacatcaacatgatccggacgacgcacgcggacgagattttcagg
aatagcttgaagaacattgcggcggctggatctcacgcggaggtttcgattggactttcc
gggttggagagtaacttgatcttgccgatggaggggcagattatgcacaactcgatcgtg
aagcacttgaagaagtttgtgctgacgccgccgaatacggcagcggacgagcggttgctg
atcgatgtgattgggttgttgggggatttgattcagattgggtatgagaacgtgttggtt
tggatcgttacgctgctgtttgaacagacgagcatttttaaccagctgctgaagtcggag
acgtgctcaggggagttgttcatgaagaacgttgactttatcaagcttgtcctgatggaa
gcacttaccagcgaacatcctgaagtgaggagtttgttgaccagtgaggaaggctttgag
atcaaggtcaaaaaggagcacaacttcaacctgtttaacaaactatttgaagtgatcacc
gatcggcttgataaagatctgcaaaagtgcgatcttcaccgaattctgtcactggtcggc
ctggtacgagtcgtcgttcgtagtggcctgttcgagtttgagaacaaatttctaaaccac
gtgataaacaagctctgctcgtacatcaccctgatccgctcgatcacccactctggatcg
acaattaccaaaagctgcctcatcgtcatgtcaaccctgctcgatcgcatgaaggatatc
cacctcaaggcgaaacacttcaagatcatcgcgctgcagtgcagccacacgcacccgttg
atccgatcgtgcgcctggaacgtcctggccaaaatcgccaaaacgctgtccggggcgcac
tcgatcatcaaggagtgcgcctatcttcccggaggtattcacgccagctgcgccaaaacg
ctgctcgatcccgaggaggccgccctggtgaaggagtccgccacgggactgctgatcaac
ctgctgtcccatcgggcggagaagaacggatcgctgcacaagtttgtgctgccgtacgac
aagggtgggaatagccaacaggacggcgatccgctgcagacggtgctggggatcttgaag
aagcatcgattcttcgaatatgcgctggaatcgctgcagaactttaccacccaggatgag
atgagcgttggagagtttgccggagttcagctggtgacttgtgatgtcgtgaagagttac
gccatgatcttcagctgtttggtggatcttaactcggagttgatcgatctgctggtgcag
aagtgctgcttgcagcagctaatgaattgcgtctccaaggtcccgatcctcccaggacga
tcagccctgctaatggtctccgaggtgtgcaacctgctagtccgttgcgtcacccttcga
agggacgaaatctgcgagcttatatcaccgtaccacgccgtaatcggcggaataatctac
ctactcaacgttgacttgtaccgcggagtcggtgatcccgtcttgcgggaggtcaccggc
aaaatcatgcacctgctgaacgccctagccctacacaaggtgggcaaccaaatgatcacg
ggcgtcctctcggagctgaagctggaacccgtggtgaacgtgatcgtcaaggggatcgcc
aatcacaagcacaaagactaccaaatcgcctgccttcgcttcctaacggtactcgtgctc
acctccgacatcaacatctcgccaacctcggagttccagtcgttcctgggactgctcgat
acgacccaactaaccgccgtagacatcccagtgaaacgtatctcggacccaaagccaaac
cgcttcatcgcgcaacccttcgacgaattctccccggacgaggatcgggaaaaccgcgat
cccaacggaagacaacgcgtcgcgacatccggtgagctggaaatcgctgccaaaccgctc
cgaaccggaagtgagcagatcttcgccacactaatccttcaattcgaactaatctgcgcc
cgggacaaaccggagaatggcgccctcgtgtcaacgctgcaaaaaaggacgctcttctcc
gccgtccaggtgatgctgcgacagtccgagcaagcgcgtaaagtcgcacgatcgcggaag
ttcctggaagttctgctggaccgactcgacgcgttgtacgccggggtcggcctctcctac
caggactttgtcaaaaagaacggtgacgccaaaaagacgccgatcgtggacgaactctcg
ttcatcgccggcatcctctcctcctggttcctcaacgacatcctcgtccaccaggccaac
atcaatcgcatctacaaactgttcctccagttttggcagtggatcagcaacaatcgcgaa
ctcgagaacgagttcatgaaggccctggtctgcctcaccgaaaacagcatcgtagtttgc
aaaacgttcgccacgaccccaccccccggacatccccactcgatcctcaaacttgtaatc
gcggtggccacggccgaaacgggcaaagtaaaaggtcccaaaagtgaactgactctcctc
accctgtgccttcgcatgctgatcaatagctgtgcgtgtcatgagggtcgcgtcatgatc
gccaagtacaacgtgctggacaatctgtgcaagctacatccggcccacacgaaattgcag
aagccgtggctcacggtgaccaagctgtggctggagttttgggaggtttacacgaggcat
aacgatgtgacggaggtgaaacacctcaccgttctgggcgccctcatccgcaaatcaacc
ccggacctgcgcctgctcgcgctcgaaatcatgcgcaacatgtcgtacgttccctcgaac
cggcccgccctgctctcctcccaggactacatgtacgcgctcaaatccgtactggacggc
accgaccccaccgaacagctcatcgtggtaagttccgtctggaaaatggtggccaactca
cacaaagccaagggcgccatcaagtccagccccttgccgcggaggttgaacgcactgcta
cagcagcgatcgctgcgggaaaactgcgaggacgatgatctctttaacgtactgaacatt
gtggtcaagttgttgaactcgtga
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integrated database retrieval system
