Chiloscyllium plagiosum (whitespotted bambooshark): 122541301
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Entry
122541301 CDS
T08871
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04144
Endocytosis
cpla04145
Phagosome
cpla04218
Cellular senescence
cpla04514
Cell adhesion molecules
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122541301
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122541301
04145 Phagosome
122541301
09143 Cell growth and death
04218 Cellular senescence
122541301
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122541301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122541301
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpla00537
]
122541301
Exosome [BR:
cpla04147
]
Exosomal proteins
Proteins found in most exosomes
122541301
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpla00537
]
Antigens
122541301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
I-set
Ig_2
C2-set_2
ig
MHC_II_alpha
Motif
Other DBs
NCBI-GeneID:
122541301
NCBI-ProteinID:
XP_043533863
LinkDB
All DBs
Position
37:complement(9149516..9160329)
Genome browser
AA seq
317 aa
AA seq
DB search
MPEVIGIAMVNGIQIDYFDTKLNQTIPKLQFMADSFGVEYWKYITSLVKTRSDIAKQVLD
TMMKSTNQTTGIHIFQWIRSVEMNEDDKVRKGSTKRSMRFGFDGRDYISLEPDRMRWVAS
NDKAVKIKEKWDSDESWNKLWKEHLEEVCVQYLMRYLQAGKKYFKRKVQPEVFISRREPN
GQDKPLTLSCLVTGFYPVDIEVTWLRNGEVMSETQSSGIRPNHNGTHQIQKEIEINAGDE
DQYSCHIDHSSLTEAQLYQWERPQLGEKRILAFPYLREKKGVFPAFLQGLAYSHRVIQHR
NRPFGPTAHAKRDPKLN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggttattggtattgcaatggtcaatggaatccagattgattattttgacacc
aaactcaatcagaccatccctaaattgcagttcatggcagactcttttggtgttgaatac
tggaaatatatcacaagtctcgtgaagacacgatcagacattgcaaagcaggttctggat
acaatgatgaaaagtacaaaccagacaactggaattcacatatttcaatggattaggagt
gtggagatgaatgaagatgataaagtcaggaaaggttccacaaagagatcgatgcgtttt
ggatttgatggaagggactatatcagccttgagccagacagaatgagatgggttgcttcc
aatgacaaggcagtgaagataaaggaaaaatgggattctgatgaatcctggaacaaatta
tggaaagaacatctggaagaagtatgcgttcagtatttaatgagatatttgcaagctgga
aaaaaatacttcaaaaggaaagttcagcctgaagtgttcatctccaggagggagcccaat
ggtcaggacaagccgctcactctctcctgcctggtcactgggttttatcctgtagacatc
gaggtgacctggctaaggaatggagaggtcatgtctgagacccaatcctcggggatacga
ccaaaccacaatgggacccatcagatccagaaagagattgagatcaatgctggggatgag
gatcaatactcctgtcacattgaccacagcagcctgacagaggcccagctctatcagtgg
gaaaggccgcagctgggggaaaaaagaatccttgcttttccgtatttaagagagaaaaaa
ggtgtttttccagcatttcttcaaggcttggcatacagccacagagtcatccagcacaga
aacagacccttcggtccaaccgcccacgccaaacgtgatcccaaactcaactag
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integrated database retrieval system
