Chiloscyllium plagiosum (whitespotted bambooshark): 122549778
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Entry
122549778 CDS
T08871
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122549778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122549778
04147 Exosome [BR:
cpla04147
]
122549778
04090 CD molecules [BR:
cpla04090
]
122549778
Enzymes [BR:
cpla01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122549778
Transporters [BR:
cpla02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122549778
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122549778
CD molecules [BR:
cpla04090
]
Proteins
122549778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
RsgA_GTPase
Rad17
SbcC_Walker_B
AAA
MeaB
AAA_24
G-alpha
AAA_28
AAA_21
AAA_29
AAA_15
AAA_7
Motif
Other DBs
NCBI-GeneID:
122549778
NCBI-ProteinID:
XP_043545733
LinkDB
All DBs
Position
5:28407553..28508189
Genome browser
AA seq
1274 aa
AA seq
DB search
MEPEGASLRNGDFNKVKHKENALEDPKKNQIKKRSKDEKKVENVPAVNSLQMFRFADGLD
ILLMVVGIIAAVAHGMCLPLLSVVFGDMTNGFICQAANSTLNMTDCDDTPFEEQMAKFSY
YYVAIGAGALLCAYIQVSFWVLTSARQTRRLRKLFLHTLLRREIGWFDVNPVGQLNTRLT
ADINKINEGIGDKIGLLFQYIATFAGGIIVGFARGWKLTLVILAASPLLALSAVLWSKLT
VSFTNLEMTAYAKAGAVAEEVLGAIRTVVAFGGQKKEIERYHRNLGEAKKIGIKKAITAN
LSVGFAYFIIFGSYAIGFWYGTTLVLENSGYTIGTVLTIFFCVTFGTFSIGQTAPYIEAF
SNARGAAYEIYKILDEKSAIDGFSEEGYRPDQIKGTVEFKNVHFNYPSRPDVKILRGLNL
KINSGQTVALVGSSGCGKSTTIQLLQRFYDLQEGSITVDGHDIRSLNIRHFRKFIGVVSQ
EPVLFATTIAENIRFGRDDVTDAEIEMATKEANAYDFVMKLPDKFDTLVGQRGTQLSGGQ
KQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKASKGRTTILIAHRLSTIRTA
DMIASFQNGVLVEQGTHAELMQQEGVYHSLVLAQSFKSTEEEHKRTENGEEQDESENLLC
KRTLSNKSSTRSGNETEIEVEENKAEEEKLRSVSFLKLFKLNKSEWPYIFLGVIGASING
ATHPAFCIIFAKIISIFTETDKAVIRQQADLYSILFFVIGLISFVTYFLQGFMFGKAGEI
LTQKLRSMAFKAMLRQEIAWFDDKKNSTGALTTRLATEASQVQTTVGSRLGLIAQNIASM
GAAVIISFIYGWQMSLLVLAIVPILAMAGVVEMKSLTGYTSRDKKELEAAGKIATEAVEN
IRTVVSLTVEPTFEKMYDENLELPYRNAKKKSQVYGFAFALSQAIQYFSYAACFRFGAYL
ITINAMDVEGVFLVFNAIVYGAVAIGQSSSFAPDYAKAKVAAMNLFALFERVPAIDSDST
DGQKLENFNGDLKFSKVYFRYQSRPDVPVLEKLYIKVGKAQTLALVGSSGCGKSTSVQLI
ERFYDPLKGEVCLDGTDIRTINIQWLRSQIGIVSQEPVLFNCSIAENIAYGDNSRTVSQE
EIEKAAKAANAQSFIEQLPDKYNTRVGEKGAQLSGGQKQRIAIARALIRQPKILLLDEAT
SALDTESEKIVQEALDKARKGRTCVVIAHRLTTVQNADVIAVIDNGKVIERGTHEQLLAR
HGAYYNLVNAQVIQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagagggtgcaagtttgagaaatggtgactttaacaaagtgaaacacaaggaa
aatgctttggaagatcctaagaagaatcagataaaaaagagaagtaaagatgaaaagaaa
gttgaaaatgtgccagcagttaactctcttcagatgtttcgttttgcagatggtctggat
attttactgatggtagttggaattatagctgcagtggctcatggaatgtgtctaccatta
ttatcagttgtttttggagatatgacaaatggatttatatgccaagctgccaattcaacc
ttaaatatgacagactgtgatgatacgccctttgaagaacaaatggctaagttttcttat
tactatgttgcaattggagcaggagcactgctatgtgcttatatccaagtttctttttgg
gttctgacttcagcaagacagacgagaagacttcgaaagttatttttgcacactttacta
agaagagagattggatggtttgatgttaacccagttggacaactcaatacacgtcttaca
gcagacatcaacaaaatcaatgagggaattggggataagattggacttttgttccagtac
atcgcaacttttgctggaggcataatagttggttttgcaaggggatggaagctaactctg
gtaattctggctgccagccctctcctcgcattatcagctgtgctgtggtccaagctcaca
gtctcgttcaccaacttggagatgacagcttatgcaaaagctggagctgttgctgaagaa
gtcttgggggcaatccgaacggtggtggcatttggaggtcaaaagaaagaaattgaaagg
taccataggaatttaggggaagcaaagaaaattggtataaagaaggcgattactgccaat
ctgtcagttgggtttgcctactttataatatttggatcttatgcaattggattttggtat
ggaaccactttggttcttgagaactcaggatatacaattggaacagttctcactattttt
ttctgcgtcacctttggaacattctctattggtcagacagcaccctatattgaagcattc
tctaatgccagaggggcagcatatgaaatctataaaatactagatgagaaatctgccata
gatggcttctcagaagaaggatataggcctgatcaaattaaaggaacagtggaatttaag
aatgtacattttaattacccatcaagaccagacgtaaagattttaagaggcctaaatttg
aagattaacagcggacagacagtagctctggtgggaagcagcggctgtggaaaaagtacc
accattcagttgctacagagattctacgatctccaggaaggatcgattacagttgatggc
catgatatacggtcactaaatatcaggcattttcgaaagttcattggtgtggtcagccaa
gagcctgtactttttgctacaaccatcgctgaaaacatacgatttggacgtgacgatgtt
acagatgcagaaattgagatggctacaaaagaagcaaacgcctatgattttgtcatgaaa
cttcctgataaattcgacactcttgttggacagaggggcacacaactgagtggaggacag
aaacaaagaattgcaattgcccgggctctggtgcgtaatcctaagattctcttgttagat
gaagccacttcagccctggacacagagagtgaagctgtggttcaagcagcattggataag
gcaagtaaaggtcgtactacaatcttgattgctcatcgcctgtccacaatcaggactgca
gacatgatagcaagctttcagaatggtgttttagtggaacaggggacacatgcagaattg
atgcagcaagaaggagtttaccattcacttgtattggcacagtcatttaaaagcacagag
gaagaacacaagagaacagaaaacggggaagagcaagatgaatctgaaaatcttctctgc
aagcgcaccctatccaacaaatcaagcaccagaagtggtaatgagactgaaattgaagtg
gaagaaaataaggcagaggaagaaaaactccgaagtgtttcatttctaaaacttttcaaa
ttgaacaaatcagagtggccatacatatttctgggagtcataggtgcgagtatcaatgga
gcaactcatcctgccttttgcattatatttgcaaagattattagtatctttactgaaact
gataaagcagtgatcaggcaacaagctgatctttattcgattttgttctttgttattggt
ttaatttcgtttgttacatatttcttacaaggctttatgtttggaaaggctggggaaatc
ctcactcagaaactgcgatctatggccttcaaggcaatgttacgtcaggagattgcttgg
tttgatgataagaaaaatagcactggtgccctaaccacaagactggcaacagaggcatca
caagtccaaacaactgtaggttcaagattaggactaatagcacaaaacattgcaagcatg
ggagctgctgttattatatcattcatatatgggtggcagatgagcttgttggtcctagca
atagtgcccatccttgctatggccggagtggttgaaatgaaatctctaacgggatacaca
agtcgtgataagaaagagcttgaagcagctggaaagatagcaacagaagcggtggaaaat
atccgcactgtcgtttctttgactgtggaaccaacatttgaaaagatgtatgatgaaaac
ttagagttgccataccgaaatgctaaaaagaaatcccaggtctatggttttgcctttgca
ctgagccaggccatccaatactttagctacgctgcttgtttccgatttggtgcatacctg
ataacaataaacgcaatggatgtagaaggtgtttttcttgtttttaatgcgattgtgtat
ggtgctgtcgcaattggacagagcagttctttcgctcctgattatgcaaaggcaaaagtt
gctgcaatgaatctgtttgcactatttgagcgtgtgccagccatagacagcgatagcact
gatgggcagaagctggaaaactttaatggtgacttgaaattctccaaagtttacttcaga
tatcagagccgtccagatgtaccagtgctagaaaaactctatatcaaggttggcaaagca
cagactttggcactcgttggcagcagtggttgcgggaaaagtacatctgtgcagcttata
gaaagattctatgatccactgaaaggagaagtgtgtctagacggaactgatatcagaact
atcaacatccaatggcttcgatcacaaattggaattgtatcccaggagcctgtgctcttt
aattgtagcattgctgagaatattgcatatggtgacaacagcaggactgtttcacaggag
gaaattgagaaggcagcaaaggcagcaaatgctcaatcctttattgaacagctccctgat
aaatacaacactagagttggggaaaagggagctcagctttctggtggacaaaaacagcga
atagctattgcacgagctctcatccggcagccaaaaatcctgcttttagacgaggcaaca
tctgcacttgatacagagagtgaaaagattgttcaggaggctctcgataaagcaaggaaa
ggccgaacctgtgtggtcattgctcaccgtctgacgacagttcagaatgcagatgtgatt
gctgtcattgacaatgggaaagtaatagaacggggcacacatgaacagctgctagctaga
catggagcttactataatctagtaaatgcccaggtcattcaataa
DBGET
integrated database retrieval system
