Chiloscyllium plagiosum (whitespotted bambooshark): 122557731
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Entry
122557731 CDS
T08871
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122557731 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122557731 (usp47)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122557731 (usp47)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122557731 (usp47)
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122557731 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
122557731
NCBI-ProteinID:
XP_043561607
LinkDB
All DBs
Position
16:complement(30001550..30184773)
Genome browser
AA seq
1380 aa
AA seq
DB search
MVPSEENQLLPTEEMFWSCRQSIFDEMKKKLSQSETAADEPRVLCIVQDTTNAKAVTQRL
TLNLPASTPLRQLFDDVASKAGYVTGTFELVWTSGLNNADQSPLDYSSEKSLADSGFEPG
KKHFIHLTDKDGEQPQFASDESGTAESSGHDDSTQERIIGPQLRENTVGCGEYSSQNYSY
SPVLGKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEEYDEDPVISIPYQL
QRLFVLLQTSKKRAVETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVKCLECGYESWRIDTYLDIPLVIRPYGSNLAFNSVEEALQAFVQPETL
DGPNQYFCERCKKKCDARKGLKFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPAELD
MSPFIDVEEEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDVVDEGICLENNSGGEKSL
KAGNEKGAWIYELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSRITQDDIRKTY
GGSTVTRGYYSSAFASSTNAYMLIYRQKESTRNAKFLEVHEFPEHIKHLVQKEKETEEQE
KRQREIERNTCKIKLFCMHPVRQVMMENKLEVHKDKTLQEAVEIAYKLMDLEDAVPLDCC
RLVKYDEFHDYLERSYEGEEDTPVGLLLGGVKSSYMFDLLLETRQPNQAFQPYKSGEVMV
KVHVVDLKTGSLVPPISIRAYLNQTVTEFKQLISQATGLSFETMRIVLERCCNDLRLLSV
PNKTLKAEGFFRSNKIFVESSDIQDNQVAFTESQLWHLLDQHANTIRLYVSLPEQSPGSQ
GLRYHHQKAAGDPGSQEDSYECAKGPLTHRKPVEAILEESTEKLKNLSLLQQQQSSCTPG
ENGDGLKSGEGSDFETIESPSQEADSSTSVDNRELENRIPPSDPETPLQSEERSDSDVNN
DRSTSSVDSDILSSSHSSDTLCNAETAPIPLTNGLDSHSITYSRRSKTNEGKKETWDTAE
EDSGTDSEYDENGKARGLTRYMYFKAEQCTSEDGSGLLVFVDKRITLAAFKQQLEPFIGV
PSSQFKVFRVYANNQEFESVRLNETLSSFSDDNKVTIRLGRALRKGEYRVKVYQLLVNDP
EPCKFLLDAVFAKGMTVRQSKEELLPQLREQCGLDLCIDRFRLRKKTWKNPGTIFLDYHI
YEEDINISTNWEVFLEALNEPEKMKSLSQLAVLTRRWRPSCMKLDPFQEIVLESSSVEEL
KEKLHAISEIPIDSIEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVI
FYRDKSEAQMEMTEEQRNGLLKKESSRLQKSGHRVNYSPRKEKALKIYLDGGPSKDSSQD
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagtgaggagaaccaactgctacccacagaggaaatgttctggagttgcaga
caaagtatctttgatgaaatgaagaagaagttgtctcagtcagagactgcagcagatgaa
ccacgggtgctgtgcattgttcaggacaccaccaatgccaaggcagttactcagcggctc
accctaaaccttcctgcatccactccactcagacaactgttcgatgatgtagcatctaaa
gcgggctatgttactggcacctttgaattagtgtggaccagtggtcttaacaacgctgac
cagagccccctggattactctagtgaaaaatctcttgctgattctggatttgaaccagga
aagaaacattttatacatctcacagataaagatggcgaacagccccagtttgcatcggat
gagtctggtacagcagaaagcagtggacatgacgacagcactcaggaaaggattattggc
cctcagctgagggagaacactgtgggttgtggagagtacagtagtcagaactactcatac
tctcctgtcctgggaaagtcagaaactggatatgttggattggtgaatcaagctatgacc
tgctacctgaacagtttgctgcagacgctcttcatgactcctgagtttaggaatgccctg
tacaagtgggagtttgaagaatatgatgaagatccagtgattagcattccttatcaactc
caaaggttgtttgtcttgttacaaactagtaagaaaagagcagtggaaacaacagatgtg
actcgaagctttggctgggacagcagtgaagcttggcagcagcatgatgttcaagaattg
tgcagggtcatgtttgatgcattggagcagaaatggaagcagactgaacaggctgacctc
atcaatcaactgtaccaaggaaaattgaaggattacgtcaagtgtctggagtgtggttat
gagagctggagaattgatacataccttgacatcccgctagttatcagaccatatggttcc
aacctggcatttaacagtgtggaagaggcgttgcaagcatttgttcagcctgaaacctta
gatggccccaatcaatatttctgtgaacgctgcaagaaaaaatgtgatgcgcgcaagggg
ctaaagtttctacacttcccatacttattgacattgcaactgaagcgctttgactttgac
tatactacaatgcacagaattaagctgaatgaccgaatgacctttccagctgagctcgac
atgagtcctttcatagatgtggaagaggagaaatctcctcagactgagagctgcacagac
agtggtgctgagaatgaaggaagttgccacagtgaccagatgagcaatgacttctcaaat
gatgatgttgtggatgaaggaatatgcctggagaataacagtggaggtgaaaaatcctta
aaggcagggaacgaaaagggtgcttggatttatgagctcttctctgttatggttcactca
ggaagtgctgctggtggacattactatgcctgtattaaatcattcagtgatggacagtgg
tacagttttaatgaccagcatgttagcaggattactcaagatgatattaggaaaacgtat
ggtggctcgacagtgaccagaggatattactccagcgcttttgccagctccaccaacgca
tacatgttaatttacagacaaaaagaatctacaagaaatgcaaagttcttggaggtccat
gaatttcctgagcatatcaaacatctagtccagaaggagaaagaaacagaagaacaagag
aaaaggcagcgggaaattgaacgcaacacttgcaagatcaagctgttctgcatgcatcct
gtgcggcaggtaatgatggaaaacaaactggaggtacataaggacaaaacattgcaagaa
gctgtagagatagcatacaagctcatggatttagaagatgcagttccacttgactgctgc
cggttggtcaaatatgacgagtttcacgattacttggagcgttcttacgagggagaagag
gataccccagtggggctgcttctgggtggagttaagtcatcatatatgtttgacttactc
ctggaaacaagacaacctaatcaagcatttcaaccatacaaatcaggggaagtgatggtg
aaagtgcatgtagttgacctaaaaacagggtctctggttccacctatcagcatccgtgct
taccttaatcaaacagtgaccgagttcaagcagctcatttcccaggccacgggactctct
tttgagacaatgcgtatcgtactggaacgttgttgcaatgatctgcggttgctttctgta
cctaacaaaacactgaaggcagaagggttcttcaggagtaataagatatttgttgaaagc
tcagacatccaggataatcaagtagctttcactgagtcacaactctggcatctactagac
cagcatgccaataccattcgactatacgtttcattgccggaacagtcaccagggtctcaa
ggactaaggtatcatcaccaaaaagctgcaggggatccaggcagccaagaggacagctat
gaatgtgcaaaagggcctctgacacacaggaaacctgtggaagccattttggaagaaagc
actgagaaattgaagaacttgtcattgctacagcaacagcagtcatcctgcactccaggg
gaaaatggtgacggtctcaaaagtggagaaggcagtgattttgaaaccattgagtcacca
tcacaagaggctgactcctcaacctctgtggacaatagggaactggaaaaccggattccc
ccctctgatccagagaccccactccagtcagaggaacgatcagattctgacgtgaacaat
gaccggagcacgagctccgtggatagtgatatcctcagctcgagtcacagcagcgacact
ttgtgcaatgcagaaacagcacctatacccctgacaaatgggctggactctcacagcatt
acatacagccgccgctcaaagactaatgaagggaagaaggaaacgtgggatacggcagaa
gaggattccggaacagacagtgaatatgacgaaaatggaaaggccaggggattgacacgg
tacatgtacttcaaagcagagcagtgcacttctgaagatggatcaggtttgttggtgttt
gttgataaacgcatcacactggcggccttcaagcagcagttagagccatttattggagtt
ccatcatcccagtttaaagtcttccgggtctatgctaacaatcaggagttcgagagtgta
cgattaaatgagactctttcctcattctctgatgacaacaaggtgactattcgacttgga
agagctctacggaaaggagaatatcgtgtgaaagtgtaccaattactagtgaatgatcca
gagccctgtaaatttctgctcgatgctgtgtttgcgaaaggaatgacggtgcgccaatca
aaggaggaactccttcctcagctgagagaacagtgtgggttagatctttgtattgacagg
tttagactgaggaagaaaacctggaaaaatcctgggacaatttttttggactatcatatc
tatgaggaagatatcaacatatccactaactgggaggttttccttgaggcacttaatgag
cctgagaagatgaagtccctgtcacagttggcagttttgaccagacggtggaggccgtcc
tgcatgaagctggacccctttcaagaaattgtcttggagagcagtagtgttgaggagctg
aaagagaagttacatgcaatcagtgaaattcccattgatagcatagaatttgctaagggc
cggggaacattcccatgtgatatttcagtactggaaattcaccaggacttagactggaat
cctaaagtctcaactctgaatgtttggccactttatatctgtgatgatggagcagtcatc
ttttacagggacaagtcagaggctcagatggagatgactgaagagcaacgcaacgggcta
ctgaagaaagaaagcagccggcttcaaaaatcaggccaccgggtgaattactcacctcgc
aaagagaaagcactgaagatctatctggatggcggccccagcaaagactcaagccaagac
tga
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