Chiloscyllium plagiosum (whitespotted bambooshark): 122559000
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Entry
122559000 CDS
T08871
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122559000 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122559000 (dcp1a)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122559000 (dcp1a)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122559000 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
122559000 (dcp1a)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122559000 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
122559000
NCBI-ProteinID:
XP_043563990
LinkDB
All DBs
Position
18:complement(28516479..28591282)
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AA seq
543 aa
AA seq
DB search
MEALSKGRDISLSALKQNDPFISSIVDVTSQVALYTFNPKASEWEKTDVEGTLFVYTRSA
SPYHGFTIMNRLNMKNLVEPINKDLEFQLQDPFLLYRNSNLSIYSIWFYDKNDCQRIAQL
MSKVVQMEAQRAQQESPGRTTPNKPSGYDEENPIDILDMLSKAKEEYEQTCQFGDSSILS
SSPGIHNSVGLAVKKSIDEPTSSPAQHHNKHILSGTKHLTVEELFGTPVSKEHLMNSNQE
ILLATQPDTKLRSQNLGLLFPYEHATELKQLGSPESLNNKINFSRSNYQEDAAQVLMTPA
ALQKSDVKTNPLYNISASPLFQSSLTFEATSNQSVATINTNGHSQNLQQEVKAVSPLMCP
ASSEITCTNQNLPSGSNPTPQNSTGERSTSDIGSQGHELLQKLKLTQQHDQQHLGKPSLA
ANFSPILVTPESFKEPNVRTTETSLQVVLTPTTTSSVGPSMLLSPGMFKHSTGMISETER
KYGSTSPLTLASESRSSPLPTVLSKTQLQEALTHLIKNDSDFLNTIHEAYLQILRKNVGN
IKL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaggccctgagtaaaggccgcgatataagcctctctgctttgaagcaaaatgatcct
tttatctcaagtatcgttgatgtgaccagccaagttgcgttgtacacttttaacccaaag
gctagtgagtgggagaagactgatgtagaaggtactttgtttgtatataccaggtcagca
tctccttaccatggctttacaatcatgaatcgacttaacatgaaaaatttagttgaaccc
atcaacaaagatctagagtttcagctccaagacccatttcttctctatagaaattcaaac
ttgtccatttacagcatctggttttatgacaagaatgactgtcaacgaattgcacaactc
atgtcaaaagtagtacaaatggaagcacagcgagctcagcaagaatctccaggaagaacc
actccaaacaagcccagtggatatgatgaagaaaatcctattgatatcttagacatgctt
agcaaagccaaggaagagtatgaacaaacatgtcaatttggtgactcaagtattttatca
agttctccaggcatacacaactctgtaggcctagcagtgaaaaagtcaatagacgaacct
acctcctctccagcccagcaccacaacaagcatattctttcaggtaccaaacatttgaca
gtagaggagttatttggaacacctgtttcaaaagagcacttaatgaattctaaccaagaa
atattattggcaacacagccagacaccaaattaagaagtcaaaacttaggtttgctattc
ccttatgaacatgcgacagaacttaagcagttgggaagccccgagagtctgaataacaaa
atcaacttttcccgatcaaattaccaagaagatgctgcacaagtattgatgacaccggct
gctctccaaaaatctgatgtaaaaaccaatcctttgtacaatatttctgccagtcccctc
tttcagtcttcgctaacttttgaagctacttctaatcagagtgttgccaccatcaacact
aatggccacagtcagaatttgcaacaagaagtcaaagcagtatcaccactgatgtgccca
gcttcttctgaaataacatgcactaaccagaacctgccttcaggaagtaatccaactcca
cagaacagcactggtgaaagaagcacttcagatattggatctcaaggtcatgagctgctt
cagaaactcaaactgacacaacagcatgatcagcagcatctcggcaaaccatcattagcg
gccaatttttctccaatacttgttacaccagaaagctttaaagaaccaaacgtaaggacc
acagaaacttcattacaggtggttctcacaccaactaccacctcctcagttggtccatcc
atgcttttgtctcctggtatgttcaaacattcaaccggaatgatttcagaaactgaaagg
aaatacggttcaacttcccctttaacattggcatcagaatctcgatcttcaccgctacca
actgttctcagtaagactcagcttcaggaagcattaactcatctaataaagaatgactct
gattttctgaacacaatccatgaagcctatctacaaattcttcgaaagaatgtaggtaat
atcaaattatga
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