Chiloscyllium plagiosum (whitespotted bambooshark): 122560328
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Entry
122560328 CDS
T08871
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122560328 (chd6)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122560328 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
122560328
NCBI-ProteinID:
XP_043566898
LinkDB
All DBs
Position
20:59797924..60050691
Genome browser
AA seq
2768 aa
AA seq
DB search
MACFLMGADTALAYPGEVRYQPSTSKASKHPLTSDASHVDAHTAQLSHTSTKDQPTLLNP
AKAPEPAGPLIETSSKSDAQGALADVNVDQTLTLSKAEDGGTRVKKKRKKKEPKEEAGSE
TATGDSAPKPKKKRKEPKGDKEPKEGKVAKEPKGSKGPKGNREPKEPKGAKGAKEPKELK
GAKEPKQPKEPKCKSNTTPKTKSSKKASKEQGPTPTEKKKKGKRKSVVPGDNSEQEQSAA
KASQGTEELTDAQKRRSGRQVKRRKYNEDLDFKVVDDAGETIAVLGAGRISPNSGSSQKG
NQTMENQEEDESAVIEKILAMRTVQKETPGGKPQEVEEFYVKYRNYSYLHCKWATVEELE
KDKRIHQKIKRFRTKRAQMKNLFVEPDEEPFNPDYVEVDRILDVAHTVDAETSEPVTHYL
VKWCSLPYEESTWELVEDIDPVKIQEYEDLQIIPEVSNLERPPAETWKKLELSRPYKADN
KLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIYLLGIRGPFLIIAPLS
TIANWEREFRTWTEVNVIVYHGSQISRQMIHQYEMHYKDAEGAPVQGLFKFNVIITTFEM
ILADCPELRKIQWSCVIIDEAHRLKNRNCKLLEGLKLMALDHKVLLTGTPLQNTVEELFS
LLNFLEPGHFPSEATFLEEFGNLKTDEQVKKLQAVLKPMMLRRLKDDVEKNLAPKEETII
EVELTNIQKKYYRAILERNFSFLAKGANQANMPNLLNTMMELRKCCNHPYLINGAEEKIL
DEFREVHNPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYL
IHRRYTYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS
DWNPQNDLQAQARCHRIGQNKAVQVYRLITRNSYEREMFDKASLKLGLDRAVLQAMNRKG
NTNGVQPLSKIEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTRTITIESEGKGS
TFAKASFVASGNRTDISLDDPNFWQKWAKIAELDIESKNGKDSLVIDTPRVRKQTKHYNS
FEDDELMEFSELDSDSEDKPSRSRRLHDKTRRYLRAECFRVEKNLLIFGWGRWKDILSHG
RFKWHLTEKDMEIICRTLLVYCLKHYKGDEKIKSFIWDLITPTKDGQNQALHNHSGLSAP
VPRGRKGKKIKTPLSQPELKNADWVASCNPDVLFHDDGYKKHLKQHCNKVLLRVRMLYYL
KQEVLGEAADKALDGIDASKLDVWIPDVDYNDMPVDWWGGDSDKSLLIGVYKHGYERYNA
MRADPALCFLERVGMPDETSLAAEQGGADLSSDITEGVDLCKGDDSELKSDGQFKDVPDE
DVNSCNESGIMEKGEDSHLAQDGMDIDRPQWPVASVLTARLRRLITAYQRCNRKEMVRME
SLARNNRRRWYPQDEIWGRVPEMDIVTMDIQQRWTRREQTDFYRVVSTFGVVYDPDRKQF
NWNQFRSFARLERKTDGSLERYFRSFMAMCRSVCRLPLRKEEPSDPSIFVEPITEERASR
TLYRIELLRKVREQVLRSPQLNERLKLCRPSLYLPVWWECAKHDRDLLIGAAKHGLSRTD
YYILNDPQLSFREAHRNYVQNGSSYFQNVPAPYSQSSLNLSQSASPASTVLTLGEKDNIE
QMDMEQEKMEEALEEPSPEAGALAVCLEVKNEEDAADSTRRCDATQAKARPPDPVAARNE
WGATSCIQAGFFSVPDSHMESKGTREFGGNCSDNNGGDSLQNPILKCSSPMENLQAVCGD
TNQTRINCLNFLQVKSNGILELQTISEKMADSVVAPVCSVAGTEPVKDTVLGVIAKHDLK
QCEMLQAENGCSEDKQSTEIIDRENVMIEHTYDMQAKYLAMGHMQTAANGLDKPQVEINQ
LSDPNSPPATPKHSDVSDDLKLMEAVPGCEHQAVAVNENSSTKEAGNVTNVHPESDDVPF
ETVGVKCLPSGLQSFRPAHSIVKVVDGAPGSPSDQVDVAPIKQEVTFRHLLEDCIKEHDS
PCETEEKSEEDSSQPEGAIALKNFDEESNTSTSLGQDEIQDNLLQDIREPTIAQLLQEKT
LYSSAEWPKDRVIINRIDNICHAVLKGKWPSAQQQSLEPQSGMYSMATPTETLNMRSCLS
VPVQAAHTLSIADGSLSAQHLTKESLLTLTFPRDQRKRRRKYEFETDRGAKRKNMEEVSP
SLTRPPVILNGWQETAMDLSKASEEASSSVPVVISASTPKLGSLEPSSAFRADMAGVLQA
GLVHPVTGQVMNGAFRGDDTSRRRRGRRKNVEGIDILFMKEKKPDNLEVDLSKQLFSGVA
RSADSMSNMMIKLPQGKQQLPTEEEQKNKSLIEWLRQHPTYTMDVSNLAPNCTAILHGLS
ERPKQRRHRCKDPSKLDINTLTGEERVPVVHKGSGRKLGGAMAPLIKELPRWLDANPEYA
VAPEWAEIVKHSGFLPESKFSRILTEPVVKEAGGRKRGRRPRSEMAKSGGVLTETATAMG
PMFMNGLIAGMDLVSLQNLRNIHNLQLAGLMGFPAGFAAIPSGEDGKSSLNMLPMMLPGV
TGMSHVFGVGGLLNNPPVVTSASNSSSSTLTTSTSSKEDVGGEQKGNTAESMKHQEGSST
GDKPGPSSSFSDSGEARVTTSNPLSFNPFLLHSMPAGLIYPSMFLPHGIGMAMPSFAQAG
HSEADGTESPKKKRKKAKEETARDGTEASPQQTTAEESTGKSTDSTAVQDSSGQETEKDS
VEGTQNAE
NT seq
8307 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctttttaatgggggcagacactgcactagcttaccccggtgaagttagatat
cagccttccacttcaaaggcatccaagcatccgctgacgtcagatgcctcgcatgttgat
gcacacacagcacagctctcgcacacaagcaccaaggaccaaccaaccttactcaatcca
gcaaaagctccagaaccagctggacctttgattgagaccagcagcaagagtgatgctcaa
ggtgcgctggcagatgtgaacgtggaccaaacactaaccctttccaaggccgaggatgga
ggcacaagggttaagaaaaaaaggaagaaaaaagagccaaaggaagaggcaggtagtgaa
acagcaaccggcgacagtgcacccaaaccaaagaagaagagaaaggagcccaaaggagac
aaggaacctaaagagggcaaagtggctaaggagccaaaaggttctaaaggacccaagggc
aacagagaaccgaaggaacctaaaggggccaaaggggccaaagaaccgaaggagcttaag
ggtgcaaaggaacccaagcaacctaaagagccaaaatgcaaatccaacactacccccaaa
actaagagcagcaagaaagccagcaaagagcaaggcccaacgccaactgaaaagaagaag
aaaggtaaaaggaaaagtgttgttccaggggataattccgaacaagaacagtctgcagca
aaagcttcacagggcacagaagaactaacagatgcacagaagcgacgatcaggccgtcaa
gtaaaacgaaggaaatacaatgaagacttggacttcaaagttgtcgatgatgccggtgaa
acaattgctgtactgggagcagggcggatttctccgaactctgggtcctcacagaaagga
aaccagacgatggagaatcaagaggaggatgaatctgctgtcattgagaagatactggcc
atgcgcactgtgcagaaggagactcctggtgggaagccacaagaagttgaagaattctat
gtcaaatacagaaattactcttacctgcactgcaaatgggccacggtggaggagctggag
aaagacaaaaggattcaccagaaaatcaaacgtttcaggaccaaacgggcccagatgaaa
aatctttttgttgagccggatgaggaaccatttaatccagactatgttgaagtagacagg
atcctggatgtggcacatacagtagatgctgaaacttcagagcctgtgactcattacctg
gtgaaatggtgttctctaccctacgaagaaagcacttgggagctagtggaagacattgac
ccagtcaagattcaggaatatgaggacttgcaaatcattcccgaagtctcaaacttggaa
cgtcctcctgctgaaacttggaaaaaactggagctgtcacgaccatacaaggcagacaat
aaactcagggagtaccagctggaaggaatgaactggctgctcttcaactggtacaacagg
aaaaattgcattctggcggatgaaatgggtctggggaagacgatacaatcaattacattt
ctgtatgaaatatacctgttgggaatccgtgggcctttcctcattattgcacctctttcc
acgatagccaactgggagcgagagtttcgaacgtggacagaggtgaacgtaattgtgtat
cacggcagtcagatcagtcggcagatgattcaccagtacgaaatgcactacaaggatgct
gagggcgctccagttcagggacttttcaagttcaatgtaattatcactacatttgaaatg
attctggctgactgtcctgaattgcgaaaaatccagtggagttgtgtgattatcgatgaa
gcccacagactgaagaacaggaactgtaaactgcttgagggtctcaaactcatggcactg
gaccacaaagtacttttgactggaacccctttgcaaaacacagtggaagaactcttcagt
ttgttgaattttcttgaaccaggtcactttccttctgaggctaccttcctggaggagttt
ggaaacctgaagactgatgaacaggtgaagaaactgcaggcagtgctgaaacccatgatg
cttcgaagactgaaggatgatgtggaaaaaaacctggctccgaaggaggagaccatcatt
gaggtggaactaaccaacattcagaaaaagtactacagggccatccttgagagaaacttc
tctttcttagcgaaaggagctaaccaggccaacatgccaaacctgctcaataccatgatg
gaactgagaaagtgttgtaaccatccctacctgatcaatggtgccgaagagaaaatcttg
gatgagttccgtgaagtgcacaatcctgatgctcctgattttcagctgcaggccatgatt
caagcagcgggtaaattggtgctgatcgacaaactgttgcccaaactgattgctggtggg
cacaaggtgctgatcttctctcagatggtgcgctgcctggatatattagaagattacctc
attcacagacggtacacctatgaacgcattgatggcagagtaagggggaacctgaggcag
gctgcaatcgaccgcttttccaaaccagactctgaccgatttgtgtttctgctgtgcacc
agagccggaggccttggtatcaatcttactgcagcagacacttgtatcatctttgattcg
gattggaacccacagaatgacctgcaggctcaggcccgatgtcaccggataggacagaat
aaagcagttcaggtgtatcgactaataactcggaactcgtatgagcgagagatgttcgac
aaagccagtctcaagctgggtctcgacagagctgtgctgcaagcgatgaatcgcaaggga
aacactaatggggtgcagccattgtctaagatcgaagtggaagatttgcttcgtaaagga
gcatatggagccctgatggacgaggaagatgaaggatcaaagttttgtgaagaggacatt
gatcagatattacttcgtcgaactcgcaccatcaccattgaatcagaagggaaggggtct
acatttgcaaaggctagttttgtggcatcagggaacagaaccgacatctctttagatgac
cccaacttctggcaaaaatgggccaaaattgcagaactggatattgagtcaaagaatgga
aaagacagtttggtgatcgacacaccacgtgtcaggaaacagactaaacactataattcg
tttgaggatgacgagttgatggagttctctgagcttgacagtgatagtgaagataagcct
tcaagatctcgccgtcttcatgacaagacccgccgatatctcagagcagaatgctttcga
gtggaaaagaacctgctgatatttgggtggggacgatggaaggacattctttcacatgga
cgattcaaatggcacttgacagagaaagacatggagattatttgtcgaactctcctggtt
tattgcctgaagcactacaaaggcgatgagaaaattaaaagcttcatctgggatcttatt
actcccacaaaggatggacaaaatcaagcattgcataatcactcgggattatcagcacct
gtacccaggggacggaaaggcaagaagataaaaacaccactttcccaaccagagctgaag
aacgctgattgggtggccagctgtaaccctgatgtgctcttccatgatgatggctataag
aaacaccttaaacaacattgcaacaaggtcttactgcgcgtacgaatgctgtattacctt
aaacaggaagtgctaggagaagctgctgacaaagctttggatggtattgatgcaagtaag
ctggatgtctggattcctgatgtggactacaatgatatgccagtcgactggtggggtgga
gactctgataagtccctgctcattggagtttataagcatggttatgagcgctacaacgct
atgagagctgacccagcactctgcttcctcgaaagggttggcatgcctgatgaaacctca
ttagcagctgagcaaggaggtgccgacctgtcatcagacataactgaaggggttgacttg
tgtaagggagatgactcagagttgaagtcagatggacaattcaaggacgtgcctgatgaa
gatgtaaactcctgcaatgagtcggggattatggagaaaggtgaagactctcatctagcc
caggatggtatggacattgaccgcccacaatggccagttgcttcagtgctgaccgctcgg
ctccgacgtctcataacagcttaccagcgctgcaatcgcaaagagatggtgaggatggaa
tctttagctcgcaataaccggcgtcgttggtatccacaggacgagatctggggaagagta
ccagaaatggatattgttaccatggatatccaacaacgctggacaaggagggagcagaca
gatttctatcgtgtggtttcgacatttggcgtggtgtatgatcctgaccggaaacagttt
aactggaaccagtttcgcagctttgccaggttagaaaggaaaacagatgggagcctggaa
aggtattttcgaagctttatggctatgtgccggagcgtgtgccgtttgcctctgaggaaa
gaagagccttcagaccccagcatttttgttgagcccatcacagaagaacgtgcttcaagg
actctgtaccggattgagctgttgcggaaagttcgggagcaggtactccggagcccacaa
ctgaatgaacggttgaaactgtgccgccctagtctgtacttgccagtgtggtgggaatgt
gccaaacatgaccgcgacctgctgattggtgctgccaaacatggcctcagtcggacagac
tactatatccttaatgaccctcaactttctttccgtgaggcccacaggaactatgtgcag
aatggaagcagttacttccagaatgtcccagcaccttacagccaatcctcactcaacctc
agccaatctgcatcccctgcatccactgtactgactctaggagagaaagacaatattgag
cagatggatatggagcaagagaagatggaagaggctttagaagagccgagcccggaagca
ggagcactcgctgtttgcttggaagtgaagaatgaagaggatgctgctgattccacaagg
aggtgtgatgctacccaagctaaagcaaggccacctgacccagtggctgcaaggaatgaa
tggggggctaccagttgcattcaggctggattttttagtgtgccagattcacacatggag
tcgaaaggaacaagagagtttggtggaaactgcagtgacaacaatgggggggatagtttg
caaaatcctatccttaagtgcagttctccaatggaaaacttgcaggctgtgtgtggtgat
accaaccaaactagaataaactgtctgaactttttgcaggtgaaatccaatggtatattg
gaattgcaaactatatctgagaagatggcagacagtgtagtagcacctgtgtgtagtgtg
gctggaacagaacctgtgaaagacacagtacttggtgtgattgcaaaacatgaccttaaa
cagtgcgagatgcttcaagctgaaaatggatgttcagaagataagcagtcaacagagata
attgatcgtgagaatgtaatgattgaacatacctatgacatgcaggctaagtatctagcc
atgggtcatatgcagactgctgcaaatggcctagacaaaccacaagttgaaatcaaccaa
ctgtctgacccaaactccccacctgcaacgcccaaacattcagatgtctctgatgatttg
aagctgatggaagctgtgccaggctgtgaacaccaagctgtagctgtgaatgagaacagc
tcaacaaaggaagctggaaacgtgaccaatgtacatcctgaatcagatgatgtaccattt
gagacagttggtgtgaaatgtctgcccagtggtcttcagtccttcagaccagcccattcc
attgtgaaggtagtggatggtgcaccagggtcaccatcagatcaagtagatgtggccccc
ataaagcaggaggtgaccttcagacatctcctggaggactgcatcaaggaacatgacagt
ccatgcgaaacggaagagaaatctgaggaagatagctcgcaacctgaaggtgctatcgca
ttgaagaattttgatgaggaaagtaatacgtctaccagcctgggtcaagatgaaatccag
gacaacctccttcaggatatcagagagccaactatcgctcagctgcttcaagagaaaaca
ctctattcttctgcagagtggccaaaggatcgagtcatcataaaccgcattgacaatatc
tgtcacgccgtgttaaaagggaaatggccatcagcacagcagcagagccttgaacctcag
agtggaatgtattccatggctactccgacagaaactctgaacatgagaagctgcctgagt
gttccagtgcaggccgcacataccctcagcattgctgatggctccttatctgcccaacac
cttacaaaggagagtttactcacattaacattcccaagggatcaaagaaagagacgacga
aaatacgagtttgagacagaccgaggagcaaagaggaagaacatggaagaggtttctcca
tctcttactcgccctcctgtaattttaaacgggtggcaagagactgctatggacctctcg
aaggcttctgaggaggcatccagttcagtgccagtcgtcatcagtgcaagcacaccaaag
ctgggatcactagagccttcgagtgctttcagggcagacatggctggggtcctgcaggca
ggcctcgtccacccagtcactgggcaggtgatgaatggcgcctttagaggtgatgatacg
tcgaggaggaggcgaggacgaagaaagaatgttgaaggaattgacatcctctttatgaag
gaaaaaaagccagacaacttggaggtggacctatcgaagcagcttttctctggggtggct
cgctctgccgacagcatgtccaacatgatgattaaactcccccaaggcaagcagcaactg
ccaactgaggaagagcagaaaaacaagagtctgatcgagtggctgaggcaacatcccacc
tacactatggatgtgtccaacctggctcctaattgtacagcaattttacacggcctttca
gaacgtcccaaacagaggaggcatcggtgcaaggaccccagtaaactggacatcaataca
ctgaccggggaggagagagtcccagttgttcataaggggagtggaagaaagctaggagga
gctatggcaccactgataaaggagctgccaaggtggctcgatgcaaacccagagtatgct
gttgcaccagagtgggcagaaattgtgaagcattcgggctttctgccagagagtaagttc
agccgcatcctgactgagcctgtggtgaaagaggccggtggcagaaagaggggaaggaga
ccaaggagtgaaatggcgaaatcaggtggagttttgacagagacagctacagcaatggga
ccgatgttcatgaatgggctcattgctgggatggacctggtgagcctgcaaaacctcaga
aatattcacaatcttcagctggctgggctgatgggattcccagctggctttgccgcaatt
ccttctggagaggatggaaagagcagtctgaacatgttgcctatgatgctccctggtgtg
acggggatgtctcacgtgtttggagttggggggttgttgaacaaccccccggtggtgaca
agtgccagcaattcgagttcatctaccttgacgacgagcacttcgtcaaaagaggatgtg
ggtggtgaacagaagggtaatactgcagagtcaatgaaacaccaggaaggatcttcgaca
ggagataaacctggtccaagttcatctttctctgactctggtgaagccagagtcaccacc
agcaatccgttgtccttcaacccattcctgctgcacagcatgcctgctggattaatttac
ccatctatgtttcttccacatggcatcggtatggcaatgcctagctttgcacaagctgga
cactctgaagcagacggcaccgagagcccaaaaaagaaaaggaagaaagccaaggaggag
actgcacgtgatgggactgaagccagcccacagcaaacaactgctgaagagagcacagga
aaatcgacagactccactgccgtgcaggacagttctgggcaggagactgaaaaagactct
gtagagggtacccagaatgctgagtag
DBGET
integrated database retrieval system
