Chiloscyllium plagiosum (whitespotted bambooshark): 122560567
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Entry
122560567 CDS
T08871
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3 isoform X1
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122560567 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122560567 (tbl3)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122560567 (tbl3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp13
NBCH_WD40
ANAPC4_WD40
WDR54
WD40_like
Nup160
Motif
Other DBs
NCBI-GeneID:
122560567
NCBI-ProteinID:
XP_043567259
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All DBs
Position
21:15849341..15909464
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AA seq
926 aa
AA seq
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MASPAVHFKTNYAVSSKIEPFYKGGKVQINKDGTYMFCTCGTKVNIVDIGTGKVTRSIEQ
EDQEDITCFSISPDDEILVTSSRALLLKQWDWKENACTRTWKAIHTSPVASMAFDSTSTL
LATGGCDSTIKIWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRLWNLS
TSKCMMVLDAHYSTVTSLAFTSDGNTLVSSGRDKIYIVWDLKTYKSERTVPVYETVEAVV
LLPENEDFTALGVTGKEPHFITAGSKGILRVWEAYSGRCVYSQCVPGKLQKDTEGDADEQ
SLTHCAIVPATQKLTTVTAEHNILTYDLCTLNLTRQFVGYNDEVLDVKFLGLSDTHIVVA
TNSPQLKVFELATLNCQILYGHTDTVLALDVFKKGTKFASCSKDKTVRIWKMSKTTGEVN
CVAQGLGHAHSIGIISCSRLKEGFIISGSQDCTLKLWNLTKSIEVNSKKAAEHEIFHAEL
TEKVHDKDINSVVVSPNDKLVATGSQDRTAKLWSTSDFSLIGVFRGHTRGIWSVQFSPMD
QILATSSADGTVKLWGLQDFNCLKTFEGHDASVLKTVFVSRGTQLLTSASDGLLKLWTIK
TNECVKTLDAHENKVWGLHCNKKDDMVVSGATDSCIIIWKDVTEIELAEEQAKQEDQILK
HQELSNLLQEKKYVKALGLAISLDQPQTVLTVIKAILGEAKGRERLESTILKLRQDQKES
VLKFCTVWNTNSKHCHEAQSVVQILLQNETPEQLLQYNGIKGALEGLIPYTERHFQRVNR
LLQASMFLDYMWQSMRLTGGSCDSDIHIGGMEIDPFFSMDKAAIGAGKAAIIPGSDCPQG
SKKQEVGKNADIDSDSSASNSGNGHKQKHLLSACEHLKENLEPAAESQSDSEEDRKSGEQ
RAKTPVRKIKQTPASVRKKTKSLPMN
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccccgctgtacacttcaaaacaaactatgctgtttccagcaagattgaacca
ttttacaaaggaggaaaagtacagataaataaagatggaacgtacatgttctgtacttgt
ggaacgaaggttaatatcgttgatatcggaacaggaaaggtgacaaggagtattgaacag
gaggatcaagaagacattacctgcttcagtatcagccctgatgatgagatattggtgaca
agtagtcgtgccttactcctgaaacagtgggattggaaagagaatgcttgtacacgtact
tggaaagctattcacactagtccagtggcgagcatggcttttgattctacctcaacgtta
ttggctacaggaggatgtgatagcacaatcaagatttgggatgtcatcaagcagtactgc
acgcacaatctgaagggttcctctggagtggttcacttggttgaatttcatcctgacata
tcacgtcttcagctgttttcctcttcgatggactataagatacggctctggaacctcagc
accagtaaatgtatgatggtgctggatgctcactacagcactgtgacttccctggcattt
acttcagatggaaatacacttgtcagctccggccgagataaaatctatattgtatgggac
ttgaaaacatacaaatcagagagaacagttcctgtgtatgagactgtggaagcagtagtg
ttactaccggagaacgaagatttcactgccttgggagtgacgggcaaagaacctcacttt
atcacagcaggcagtaaagggatcctccgagtttgggaagcttactctggaagatgcgtg
tactcacagtgtgtgcctggtaaacttcagaaagatactgaaggggatgcggatgagcaa
tctctgacccactgtgccattgttccagcaacgcagaaactaaccacagtaactgctgaa
cacaatattctcacctatgacctatgcactttgaaccttacgcgccagtttgtaggttat
aatgatgaggtgctggatgtaaaatttttgggtctatctgacacacacattgttgtggcc
accaacagcccacagctgaaagtatttgagcttgcaacgttaaattgtcaaattctatat
ggacacacagataccgtattagccctggatgtgtttaagaaaggcaccaaatttgccagt
tgttcaaaggacaaaaccgttcgaatctggaaaatgagtaaaacgactggagaagtgaac
tgtgtggcacaaggcctaggacatgcccacagcatcggtattatttcttgctcacgattg
aaagaaggcttcattatcagtgggagccaggactgcaccctaaagctgtggaatcttaca
aagtccattgaggttaacagtaagaaagccgcagaacatgaaatctttcatgctgagttg
actgagaaagttcacgacaaggatataaacagtgtggtagtctctccaaatgacaagctg
gtggctaccggctcacaggacagaacagcaaagctctggtccacgtctgatttctcactc
atcggagtgtttcgaggtcacacccgtggaatttggtcggtccagttttctccgatggac
cagatcctagctacctcttcagcagatggcactgtcaaactctggggacttcaggacttc
aactgcttaaagacatttgaaggccatgatgcttctgtactgaaaacagttttcgtgagt
cgtggaactcagctgttgacaagcgcatctgatggcttgctgaaactgtggaccatcaaa
actaatgaatgtgttaaaacattagacgcccatgagaataaggtgtgggggctccactgt
aataagaaagatgatatggtcgtctctggagccacagactcgtgtataattatctggaag
gatgtgacagagatagagcttgctgaagagcaggccaaacaggaagaccagattttgaag
caccaagaattatctaatttattgcaagagaagaaatatgtgaaggctttgggattggca
atttctttggaccaacctcagactgtgcttacggtaattaaagctatacttggtgaagct
aagggacgtgaaaggctggaatcaacaatcctcaagttgcgacaagatcagaaagagtct
gtgttaaagttctgcactgtatggaacacaaattctaaacactgtcatgaagctcagtct
gttgtccagatcctcctacaaaatgaaactcctgagcaacttcttcaatacaatgggatt
aaaggtgctttggaaggattaatcccttatactgagcgacatttccagagggtgaataga
ctgttgcaggcctcaatgtttctggactatatgtggcagagtatgagactgactggaggg
tcctgtgactcagacatacacattgggggcatggagattgacccgttcttttcaatggac
aaagcagccattggggccggaaaagctgcaattattccaggatccgattgcccccagggg
agcaagaagcaggaggttgggaaaaatgcggatattgacagtgacagtagtgcatcaaac
agtggaaatggccacaagcaaaaacacctgctgtcagcttgtgagcacctcaaagagaat
ttggagcccgcagcagaaagtcagagtgattcagaggaagacagaaaatccggtgaacaa
agagcaaagacacctgtaagaaaaataaagcaaacaccggccagtgtgaggaagaaaaca
aaatctctcccaatgaattga
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