Chiloscyllium plagiosum (whitespotted bambooshark): 122560641
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Entry
122560641 CDS
T08871
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
cpla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122560641
03015 mRNA surveillance pathway
122560641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122560641
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122560641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
Nup35_RRM_2
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122560641
NCBI-ProteinID:
XP_043567434
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All DBs
Position
21:22264901..22283489
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AA seq
294 aa
AA seq
DB search
MDSELVLSLQIFTLRAPSPTKRKEHTQEKSKDRTKEKSSIKESSEKERGRDKTRKRRSAS
TGSSSTSSSSSSGSSSTSASSSGSSSSSASSRSGSSSSSRSSSSSTSSGSPSPSRRRHTN
RRRTRSKSKSPKRDDKERKKRSPTPRPTKVHIGRLTKNVTKEHIMEIFSTYGKIKLIDMP
LDRFHPHLSKGYAYVEFENPDDTEKALKHMDGGQIDGQEVTATAVLAPRPRPLPRRMTPP
RRMPPPPPMWRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaattagttttatcattgcaaatatttacgttaagggctccgtcgccgacc
aagcgtaaagaacacactcaagaaaaatccaaagacaggaccaaggaaaaatctagtatc
aaggagtcaagtgagaaagaacgaggtcgtgataagacccgcaaaaggagaagtgcctca
actgggagcagcagcactagctccagctccagttcgggatccagttctacctctgcctcc
agcagtggatcgagctcatcctcagcctctagtcgctctggaagttctagcagttctcgt
agctccagttccagtacttcctctggatctccaagtccgtcccgacgcaggcatactaac
aggaggcgcactcgttcaaaatctaaatcaccaaaacgagatgacaaggaaagaaagaaa
agaagtccaactcccaggccaacgaaagtgcacattggcaggctgacaaagaatgtgacc
aaggagcacatcatggagatcttctctacatatgggaagatcaaactgattgatatgcca
ctagaccgcttccaccctcacttgtccaaaggttatgcctatgtggagtttgagaaccca
gatgatacagagaaggctctgaaacatatggatggaggtcagatcgatggtcaggaagta
acagcgactgccgtgttggctcctcggcccagaccattgcctcgacgaatgacgcctcca
cgtagaatgccaccacctcctcccatgtggcgtagaactcccccacgaatgaggagaagg
tcccgctcgcctcgcagacggtcaccagtccgcagacggtctcggtcacgatcaccagga
cgccggcgtcaccgtagcagatccagctccaactcctcccgataa
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