Chiloscyllium plagiosum (whitespotted bambooshark): 122564122
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Entry
122564122 CDS
T08871
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122564122 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122564122 (pom121)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122564122 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
122564122
NCBI-ProteinID:
XP_043574653
LinkDB
All DBs
Position
28:39382260..39440009
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AA seq
1277 aa
AA seq
DB search
MSPAHKRSVITWAAGLGFALLFSFYILGWYLLGLLAVVSAWVYYSSLEGVGPRPGLRDLL
DRTVAFLLGTRWAEVLHNRLNGGGGHWKGRGRSVRGRPQAGPRNPGRAPGNSCKWELVNC
EQRNPLAEAYADERSPADLMMGSYLSNENSAQASFGNREIRNRYSRPNPMQTPTRRLSFG
EHQAMMNKFTVTPRRRYPIHQPQYSVPGTLPTVRWDGYQKKNVLSSRNSPMVQSPVTVKI
ARPDANMMRSSLLDYMMSPAVSPLTDPCSKATVLSALKESRKRAVEDDAERTLISERENK
RRRHDSSGSGHSAFEPLLANGAPASLIPKPGTLKRSTNSQCSDDPISKRSRTSSISSLSS
TCVGGKHSSPRNPIFSSYSSTRGHVQGAKNYVCVRNASPLSSPASSRSQTPERPGKKKRE
EVVQRSDTSTPVKVDRTEKDQTVEEESVCLLSKSSPSTVDCSPSEGDGKRKRKIPLLSKR
KGDQLTLHPPLELGYTITADDVDSEKKAGLDRIKKALQEKEEPAKSPTPVTTTTVPSLSV
TFTAPTGEISAEPTASSTPISAVVSSPLLVSLKKMQNCSNAVSNSDSVDGVTSSNTVKAL
ESSAIAFKNDVLPPPTTLTTSMAMTTDIAGFKPIDVLNFSCSSITQPLITPINKPATKAI
TTTTNSCQVSALVSPQENKVSKEPEMSTVACTGSSAPPSTSFSLPSTVTAKPAVTSVTAP
SSASTAGFKPVFGLPVAQQTNIVSTASSLTMPVTTPVTLASITSSCATSTISFKPVFGNS
STPATSTTTSTPFTFGQSTQAAINNETAVTTTCPKSISSLFPFTASNSLAGSNVDSETKG
SKATFSFGLSVAVTSKPNTTTTAINNVSSPQLFQFGSNPSTTTAAPSDVFQFGKGSADTS
ATSASPRASVFGQSTVVTSQVSTSIAPTSNLFGGFGPSVSTPATTSSGQLALAFGNSAKT
SLFGNATSAPPFGGPTAQLNFGGTGSQSTFGTNAAATQKVPSKTPAFGNAVTPFSFGASA
VKSAFPSTTSQSTFGTPSQSVFGSATAQTGFGSVSTQPFGSTSAAFSFGTTTTSTAAPMF
NATKSLSGGTTGSIFGSSQMVGFGSSNQAAVTTSGFTLAASNPNIAAAGFFGSGQSGFCS
SNPSVPFATSTSTASSQNMFGSALTNQAQQNQSTPQFNFGATNTVENKPVFGGFNFGTTT
LNFGAGTAASGFGQSTPSGNFSFGPTGAPATTFGSPGAGAAAPSAFAGTPTFSIGAGSRP
TGTRQRLQARRQHVRKR
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcacacaagcggtctgtgataacgtgggcggcggggctaggcttcgctttg
ctgttttccttctacattttgggctggtacttgctgggcctgctggcggtggtttccgct
tgggtttattactcttcgctggagggagtaggccccaggcccgggctccgagatttactc
gaccgcaccgtcgcgtttctcctcgggacgcgttgggccgaagtgctgcacaacaggttg
aacggaggaggcggccattggaaagggagaggtcggagtgtcagaggcaggccccaggcc
ggtcctcggaatcccggccgggccccgggcaatagctgcaagtgggagctggtgaattgt
gagcaacgcaacccgctggcggaggcttatgctgatgagcggagccccgccgacctcatg
atgggcagctacttgtcgaacgaaaactcggcacaagcctcttttggcaacagagagata
aggaaccgctacagtcggccgaatcctatgcagaccccgaccaggaggctgtcctttggg
gagcatcaggccatgatgaataaatttacagtgacccctcggcgacggtatccaatccac
cagccccaatattcagtacctggaactctaccgactgtccggtgggatggctatcagaag
aaaaatgttttatcttccaggaactcacccatggtacagagtccagtgactgtaaaaatt
gcacgacctgatgcaaacatgatgcgttcatctctattggactatatgatgtcccctgct
gtatctcctctaactgacccatgctcgaaagcaacagtgcttagtgcgctcaaagaaagt
cggaagagagcagttgaagatgatgcagaaagaactttgatatcggaacgagagaacaag
cgcagacgccatgacagcagtggcagtggtcactctgcatttgagcccctgttggccaat
ggagctccagcttctttgattccaaaacctggaaccctgaagaggagcactaattcccag
tgttcggatgaccccatctccaaaagatcgcgaacatcctccattagctcactgagcagc
acatgtgtgggtgggaagcattcttcccctcgcaatcccattttcagttcttacagttcc
actcgaggccatgttcagggtgctaagaattatgtctgtgtacggaatgcatctccactc
tccagccctgcatcttcacgttctcaaactcctgagagaccagggaaaaaaaagagagaa
gaagtagtacaaaggtcagatacttctactcctgttaaggtggacaggacagaaaaagac
caaactgtggaagaagaatctgtgtgtctgttgtcaaaatcatcaccgtcaacagtagac
tgttctccctcagagggagatgggaaacggaaacgcaagattcctctcctatcaaaacgt
aaaggagatcaactaactctgcatcctccgctagagcttggctataccatcacagccgat
gatgtggattctgaaaagaaggcaggtcttgacagaattaagaaagcattgcaggaaaag
gaagagcctgcaaagtcaccaaccccggtgacgactacaacagtaccctcgctgtcagtg
acatttactgccccaacaggagaaatttctgctgaaccaacagccagctccacacccatt
tctgctgttgtctccagtcctctgctggtcagtttgaagaagatgcagaactgctcaaac
gcagttagtaattcagattctgtagatggagtaacttcaagcaacacggttaaagcctta
gagtcttccgctatcgcattcaagaatgatgtattgcctcctcctacaactcttactact
agtatggcaatgacaactgacattgcagggtttaagccaattgatgttttgaacttttca
tgttcctccatcacccagccacttataactccaatcaataaacctgctaccaaagccatc
actaccaccaccaactcatgccaggtttctgctcttgtaagtccacaagaaaataaagtt
agcaaagagcctgaaatgagtaccgttgcatgtacagggagttctgcacctccaagcaca
agttttagcctgcctagcacagtgactgcaaagccagcagtcactagtgtcacagctcct
tcatctgccagtacagctgggtttaagccagtctttggtctgccagtggcacagcagacc
aatatcgtctcaacagcgtcgagtttgacaatgccagttactacacctgtgactttggca
tcaataacatcaagctgtgctacctcaactatttcattcaaaccagtgtttgggaactct
tcgacacctgcaacttcaactaccacatctacaccattcacatttggtcagtcaactcaa
gctgctattaataacgaaactgctgttaccacaacttgtccaaaatctatttcttctcta
ttcccatttacagcctccaattcactagcaggttcaaatgttgattcggaaacaaagggc
tcaaaagccacatttagttttggtttaagtgttgctgttacttcaaaacccaatactaca
actactgcaattaacaacgtttcatcaccgcaactgtttcagtttggttcaaacccttca
accaccacagcagcaccgagtgatgtattccagtttgggaagggctctgcagatacgtct
gcaacatcagctagcccacgagcttctgtctttggacaatcaacagtggtcacaagccag
gtgtcaacaagtattgcacccacttcaaatttatttgggggttttggcccttcagtgtca
acacctgctaccacttcaagtgggcagcttgctcttgcgtttggaaactccgcaaaaacc
tccctatttggtaatgccacaagcgcaccacctttcggtggtccgacagcccaacttaac
tttggaggcacaggcagtcagtcaacgtttggaacaaatgctgcagcaactcagaaagtc
ccaagtaaaactcctgcctttggcaatgctgttactcccttcagttttggagcttctgca
gtcaagtcagcctttccaagtaccacttcgcagtctacatttggaactcccagccagtca
gtgttcgggagtgctacagcccagactggatttggatcagtttctacacagccatttggc
agcacctccgcagctttctcatttggtacaaccaccacttccactgctgctccaatgttc
aatgctacgaagagtttgagtggtggtacaactgggtcgatctttggctcttcacagatg
gttggctttggttcatcgaaccaggcagctgtaacaactagcggtttcactcttgctgcg
tcaaatccaaatatagctgcagctggcttctttggttcaggtcagagtggattttgttct
tcaaacccttccgtcccatttgccacttccacttcgacggcgtcatctcaaaatatgttt
ggttcagcattgactaaccaggcccagcagaaccagagcactccacagttcaactttgga
gccacaaacacagttgagaacaaacctgtatttggagggttcaactttggaactaccact
ttgaactttggggctgggacagctgcatctggatttggacaaagtactccgagtggcaac
ttttcttttgggcccactggtgctccagcaacaacctttgggagtccaggagcaggtgca
gcagcaccatcagcatttgcaggaacgcccaccttttctatcggagctggatctcgacct
actggaaccagacagagattacaggcgagacgtcagcacgtacggaagcgatag
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