Cavia porcellus (domestic guinea pig): 100733939
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Entry
100733939 CDS
T07777
Symbol
Scn10a
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100733939 (Scn10a)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100733939 (Scn10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Na_trans_cytopl
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
100733939
NCBI-ProteinID:
XP_013001731
Ensembl:
ENSCPOG00000013968
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MELPFGFLETTNFRRFTPESLAEIEKQIAALKAGKKVRDKHREQKDQKEKPRPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDPFYKAHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSWFTLFITLTIVANCVCMTRSDLPEKIEYLFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGTATDLKGFSGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVRNGTTPQQAANCSSADCFCLFPS
LTDTYAIKPGTLDPLLCGNGTGAGLCPDGYICLKTCENPDFNYTSFDSFAWAFLSLFRLM
TQDSWERLYQQTLRASGKMYMVFFVIVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEA
KEKTFQEALERRRKEQEVLLAMGIDTASLPSRNGSPLGSKNTSERRHRMKSRASEGSTED
NKSPQSEQYNQRRMSFLGLTSGRRRASHGNAFHFRAPGQDVSFPDGIADDGVFHGDHESR
QGSLLLGRGAGQQGSLPRSPLPQPPNPGSRHEEEGHPTLPAIELPPGATEVLAFDAGQKK
IFLSADYLNEPFRAQRAMSVVSIMTSVIEELEESERKCPPCLTSLAQKYLIWECCPTWLK
LKEVLFKLVTDPFAELTITLCIVVNTIFMAMEHHGMSSAFESMLQIGNIVFTIFFTAEMV
FKIIAFDPYYYFQKKWNIFDCVIVTVSLLELSMVKKGSLSVLRTFRLLRVFKLAKSWPTL
NTLIKIIGNSVGALGNLTIILAIIVFIFALVGKQLLGEAYCTKGNILPGDEPPRWHMHDF
FHSFLIVFRILCGEWIENMWACMQVSEKPLCLILFLTVMVLGNLVVLNLFIALLLNSFSA
DNLTTPDDDGEVNKLQVALGRLQVFGRQTRRALRGFFCRLCLLAGPKVESQLTEKPPLSS
SKAENHIAASGSPRAPPPPRGPSAEHNDFITNPNLWVSVPIAEGESDLDDSEDGEQDAPN
SWPGTLEGLQEQLPQAERCGDHLTPRSPCSGTSSEDLAPFQGGKRKGDNGAPPDRTQVMD
DTSSSEGSTVDCPDPEEILRKIPELADDLQEPDDCFTEGCLRYCPCCNVNITKLPWAMGW
QLRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYTDRVFTFIFVF
EMLLKWVAYGFKKYFTNAWCWLDFLIVNISLVSLTAKILEYSDVESIKALRTLRALRPLR
ALSRFEGMRVVVDALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTNGDFA
LVNWTVVNNMSECENQNYTGHLFWVNVKVNFDNVMMGYLALLQVATFKGWMDIMYAAVDS
REVNSQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKIRGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTKQAFDISIMVLICLNMITMMVETDD
QSKEKTQVLGKINQFFVAVFTGECVLKMFALRHYYFTNGWNVFDLIVVLLSISSLIFSAI
LTSIESYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYSIFGMSSFPHVKEEAGIDDMFNFKTFANSMLCLFQITTSAGWDALLSPILNTGPPYCN
GTRGDCGSPAVGIFFFTTYIIISFLIVVNMYIAVILENFNAATEESTEPLSEDDFDMFYE
TWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDKIHCLDILFA
FTKKVLGESGELDTLKASMEEKFMATNLSKTSYEPIATTLRWKQEDISATVIQKAYRSYV
QHRSLACSNSSGVPRAEEEAESLPGEGFVAFMANENYALPDKSETASATSFPPSYDSVTR
GLNDRITMSTSSSIQNEDEAMSKAVTDPGPQ
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggaactcccttttgggttcctggaaactaccaacttccggaggttcactccagagtca
ctggcggagattgagaagcaaattgctgcccttaaggcagggaaaaaagtcagagataaa
cacagggagcaaaaggaccaaaaagagaaacctcggccccagctggacttaaaggcctgc
aaccagctgcccaaattctatggtgagctcccagcggaactgatcggggagcccctggag
gacctagaccccttctacaaagcacaccggacatttatggtgctgaacaaagggaggacc
atttcccggttcagcgccactcgggctctctggctattcagtcccttcaacctcatcaga
agaacagccatcaaagtgtctgtccactcgtggttcactttatttatcacactcaccatt
gtggccaattgtgtgtgcatgactcgaagtgatcttccagagaaaattgagtatctcttc
acggtcatttacactttcgaggctttgataaagatactagcaagagggttttgtctgaac
gagttcacctacctgcgagatccctggaactggctggactttagtgtcattaccttagca
tatgttggcacagcaacagacttgaaaggattctcaggcttgaggacattccgcgttctc
agagctttgaaaacagtttccgtgatcccagggctgaaggtcattgtgggggctctgatc
cactcggtgaggaagctggccgacgtgaccatcctcactgtcttttgcctgagcgtcttc
gccttggtgggcctgcagctcttcaaaggcaacctcaagaacaagtgcgtcagaaatggc
acgacaccccagcaggccgccaactgctcatctgcagactgcttttgtctcttcccttcc
ttaacagatacctacgcgattaagccaggcacgctggatcccctgctgtgtggcaatgga
accggtgctggcctgtgccctgatggttatatctgcctcaaaacttgtgaaaacccagat
tttaactacaccagctttgattcctttgcttgggctttcctctccctgttccgcctcatg
acgcaggattcctgggaacgcctctaccagcagaccctcagggcttctgggaaaatgtat
atggtctttttcgtgattgtcatcttcctgggctctttctacttggtcaacttgatcctg
gctgtggtcaccatggcctacgaagagcagaaccaggcaaccattgctgaaattgaagca
aaggagaagactttccaagaggccctcgagaggcgccggaaggagcaagaggtgctgctg
gcgatggggattgacactgcctctctgccttcccgcaatgggtccccattaggctccaaa
aataccagtgagagaaggcacagaatgaagtcaagagcatcagagggttccaccgaggac
aacaagtcaccccaatcagagcagtacaaccagcgcaggatgtctttcctaggacttact
tctgggagacggcgggccagccatggtaatgcattccacttccgagcccctggccaagat
gtctcattccctgacgggatcgcagatgatggagtctttcacggagaccacgaaagccgt
caaggctccctgctcctgggcaggggtgctggacagcaaggttccctccccaggagccct
ctgcctcaaccccccaaccctggctcccggcatgaagaagaggggcaccccacactgcca
gctatcgagcttccccctggagccactgaagtcttggcatttgacgcaggacagaagaag
attttcttgtcagcagactacttgaacgaacccttccgagcccaacgggccatgagtgtg
gtcagtatcatgacctccgtcattgaggaacttgaggagtctgaacggaagtgcccaccc
tgcttaaccagtttggctcagaagtatctgatctgggagtgctgtcccacgtggctaaag
ctcaaggaagttctcttcaagctggtaacggacccctttgcagagctcaccatcaccctg
tgcatcgtggtaaacacgattttcatggccatggagcaccacggcatgagcagcgccttt
gaatccatgctgcagatcggcaacatcgtcttcaccatattttttactgccgaaatggtc
ttcaaaatcattgcctttgacccctactattacttccagaagaagtggaatatcttcgac
tgtgtcatcgtcaccgtgagcctgctggaactgagcatggtcaagaagggaagcctgtct
gtgctgcggaccttccgcctgctgcgggtcttcaaactggccaagtcctggcccaccctg
aacacactcatcaagatcattggcaactcggtgggggcgctggggaacctgaccatcatc
ctggccatcatcgtcttcatcttcgccctggtcggcaagcagctcctcggagaggcctac
tgtaccaaagggaatatactgccgggtgacgagccgccccgctggcacatgcacgacttc
tttcactcctttctgatcgtcttccggatcctctgtggcgagtggatcgagaacatgtgg
gcctgcatgcaagtcagcgagaagcccttatgtctcatcctcttcttgaccgtgatggtg
ctggggaacttggtggtgctcaacctgttcatcgccctgctgctgaactctttcagtgcc
gacaacctcacgacacctgacgacgatggggaggtgaacaaactgcaggtagccctgggg
cgcctccaggtgtttggtcgccaaaccaggcgggcccttcgaggcttcttctgcaggctc
tgcctgctggctgggcccaaggtggagtctcagctgacagaaaagcccccactctccagc
tccaaagccgagaaccacattgctgcctcagggagccccagagcaccgccacctcccaga
gggcccagcgctgagcacaatgactttatcaccaatcctaacttgtgggtctccgtgccc
attgcagagggcgaatctgatctcgatgactccgaggatggagagcaggatgctccaaac
tcgtggccaggaaccctggagggactgcaggagcagctgccgcaagctgagaggtgtggg
gaccacctgacacccaggagcccgtgctctgggacatcctctgaggacctggctcctttc
cagggtgggaagcggaaaggtgacaatggagctcccccagatcgcacacaggtcatggat
gacacgagctcctctgagggcagcacagtggactgcccagatcctgaggagatcctgagg
aagatcccagaactggcagatgacctacaagaaccagacgactgcttcacagaaggctgt
cttcgctactgtccctgctgcaatgtgaatatcaccaagttgccatgggccatgggctgg
cagttgcgcaagacctgctaccgcattgtggagcacagctggtttgagagcttcatcatc
ttcatgatcctgctcagcagtgggtctctggcctttgaagactgctacctggaccagaag
cccacagtgaaggcgctgctggagtacacggacagggtgttcacctttatctttgtgttc
gagatgctgctcaagtgggtggcctatggcttcaaaaagtacttcaccaacgcctggtgc
tggctggacttcctcattgtaaatatctcactggtaagcctcacagcaaagatcctggaa
tactctgacgtggaatccatcaaagcccttcgaaccctccgtgccctgcggcccctgagg
gctctgtctcgattcgaaggcatgcgggtggtggtggatgccctgctgggtgccatcccc
tccatcatgaacgtcctgctcgtctgcctcatcttctggctcatcttcagcatcatgggc
gtgaacctctttgcggggaagtttgggaggtgcatcaaccagaccaatggagactttgct
cttgtgaattggacagttgtgaataatatgtctgaatgtgagaatcaaaactatactggc
cacctcttctgggtcaatgtgaaagtcaactttgataatgttatgatgggttacctcgca
cttcttcaggtggcaacctttaaaggctggatggacattatgtatgcagccgtcgattcc
cgagaagtcaacagtcaacccaagtgggaggacaacgtgtacatgtacttgtacttcgtc
atcttcatcatttttggtggcttcttcacactgaatctctttgttggcgtcatcattgac
aacttcaatcaacagaaaaaaaagataaggggccaggacatcttcatgacagaggagcag
aagaaatactacaacgccatgaagaagctgggctccaagaagccccagaagcccatccca
cggcccctgaacaagtaccagggctttgtctttgacattgtgaccaagcaagcttttgac
atcagcatcatggtactcatttgcctcaacatgatcaccatgatggtggagacagacgac
cagagtaaagaaaagacccaagtccttggcaaaatcaaccagttctttgtggctgtcttc
actggagagtgtgttctgaagatgttcgccctcaggcattattacttcaccaatggctgg
aacgtgtttgacctcatcgtggtactcctctccatcagcagtttgatattttctgcaatt
cttacatcaattgaaagttacttctccccaaccctcttccgagtcatccgcctggcccga
attggccgcatcctccgattgatccgggcagccaaagggatccgcacgctgctctttgcc
ctcatgatgtccctgcctgctctcttcaacatcgggctgctgctcttccttgtcatgttc
atctactccatctttggcatgtccagctttccccatgtgaaggaggaagctggcatcgat
gacatgttcaacttcaaaaccttcgccaacagcatgctgtgcctcttccagatcaccacg
tcggctggctgggatgccctcctcagccccatcctcaacacggggcccccctactgcaac
ggcacaagaggggactgtgggagcccagctgtgggcatcttcttcttcaccacctacatc
atcatctccttcctcatcgtggtcaacatgtacattgcagtgattctggagaatttcaat
gcagccacagaggagagcaccgagcccctgagtgaagatgactttgacatgttctatgag
acctgggagaagttcgacccagaagccacacagttcattaccttttctgccctctcagac
tttgcagacacactctctggccctctgcgaatcccaaaaccaaatcggaatatattaatc
caaatggacctgcccttggtccctggagataagatccactgcctggacatccttttcgct
ttcaccaagaaagtgctgggagaatctggggagttggacactctgaaggccagtatggaa
gagaagttcatggcaactaatctttcaaagacatcctacgagccaattgcaaccaccctc
cggtggaagcaagaagacatttcagccactgtcattcaaaaggcctaccggagctatgtg
cagcatcgctccttggcatgctccaactcatctggtgtgcccagggctgaggaggaggct
gagtcgctcccaggtgaaggttttgttgcatttatggcaaatgaaaattatgcgctccca
gataaatctgaaactgcatctgccacatctttcccaccatcctatgacagtgtcactaga
ggccttaatgacagaatcaccatgagcacatccagctcaatccaaaatgaggatgaagcc
atgagtaaggcggtgactgaccctggaccccagtga
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integrated database retrieval system
