Crocodylus porosus (Australian saltwater crocodile): 109308462
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Entry
109308462 CDS
T07440
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpoo01002
]
109308462 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoo04121
]
109308462 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpoo04147
]
109308462 (USP13)
Enzymes [BR:
cpoo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109308462 (USP13)
Peptidases and inhibitors [BR:
cpoo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109308462 (USP13)
Ubiquitin system [BR:
cpoo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109308462 (USP13)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109308462 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
109308462
NCBI-ProteinID:
XP_019388312
Ensembl:
ENSCPRG00005010083
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MQRAALLGGGRDAPMAAADLGEMLVPYMPTIRVPKAGDRVYKAECAFSYDSPDSEGGLYV
CMNTFLGFGREHVERHYRKTGQCAYMHLKRHVIEKVTGAAGGALPKRSNGKLFLDLETNG
DLNNDDYEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSSKSPYRKQDPDSWEE
ELQVSKHAKSLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGH
ALEHYKEMGYPLAVKLGTITPDGADVYSFEEEEAVLDPHVAKHLAHFGIDMLQMQGTENS
LRDNDIKPRVSEWEVIQESGMKLKPMYGPGYTGMKNLGNSCYINAVMQAIFSIPEFQRAY
VGNLPRIFDYSPLDPTQDFNTQMVKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGI
SPRMFKALISKGHPEFSSNRQQDAQELFLHLINLVERNPVGSENPSDVFRFLVEERTQCC
QSRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPPPELVRARIPFSAC
LQAFSEPNNVDDFWSSALQAKSAGVKTSCFASFPEYLVVQIKKFTFGLDWIPKKLDVSID
MPDLLDINHLRATGLQPGEEELPDIAPPIVIPDDPKDHMMNHFMELPDIDDSSVMQLAEM
GFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLIIPGFGGVAATGAAGLGVIGL
DNQPPEEMVAIVVSMGFQRNVAIQALKATNNNLERALDWIFSHPEPEEESETASDVMYME
NNANANILTEAGSEGPRVRDGSGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLK
VCASERPPKDLGYIYFYHRIPS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgccgcgctcctgggcggcgggcgggatgcgccgatggcggcggcggacctg
ggcgagatgctggtgccctacatgcccacgatccgcgtgcccaaggccggcgaccgcgtc
tacaaggcggagtgcgccttctcctacgactcgcccgattctgaaggaggtctctacgtg
tgcatgaacacgtttctgggatttggacgggaacatgttgaaaggcattatcggaaaaca
ggacagtgtgcatatatgcatctgaaacgacacgtgatagagaaggtaacaggggctgca
ggtggagccttaccaaaaaggagtaatgggaagctatttttagatctagaaacaaatggt
gatttaaacaatgatgattatgaatatgaagatgaagccaagcttgttatatttccagat
cattatgaaatctcattaccaaacatagaagagttaccagcactggtgacaatagcttgc
gatgctcttctcagctccaaatctccctaccgaaagcaggatcctgattcctgggaagaa
gaactacaagtatctaaacatgccaaatcacttgtacagttagataatggcgttcggatc
ccccccagtggctggaaatgctcaaagtgtgacctgcgggagaatctctggttgaacctg
acggatggctcagtgctgtgtggaaaatggttttttgatggcagtgggggaaatgggcat
gctctggaacactacaaagagatgggatatccattagcggtgaagctaggaaccatcact
cctgatggcgcagatgtctattcctttgaggaggaggaggcagttttagatccacacgtg
gcaaagcacttggcacacttcgggattgacatgctccagatgcaagggacagagaacagt
ctaagagataacgacatcaagccaagagtctctgagtgggaggtaattcaggaatctggc
atgaagctcaaacccatgtatggcccaggatacacaggcatgaagaacctgggaaatagc
tgctacatcaacgctgtcatgcaggccattttcagcatccctgagtttcagcgagcgtac
gtgggaaaccttcctagaatattcgactactcgcctctcgatccaacgcaagatttcaac
acacagatggttaaattaggacacggcctcctttcaggccagtactctaagccaccaatg
aaatctgagcttattgaacaggtgatgaaagaagaacacaagcctcagcacaacgggatt
tctcctcgaatgtttaaggctttgataagtaaggggcaccctgaattttcctccaataga
cagcaagacgcacaggagcttttcctgcaccttataaatcttgtagagagaaaccctgtt
ggttcggaaaaccccagcgatgtttttcggttcctggtggaagaacgtacgcagtgctgc
cagtcccggaaagtccggtacacagagagggttgactatatcatgcaactgccggtggct
atggaggcagcaacaaacaaagatgaattaattgcctatgaactgaagaggagagaggca
gaagctgctaggagaccgccaccagagcttgtccgtgccaggatcccatttagcgcgtgt
ctgcaggccttttctgaaccgaacaacgtagatgacttctggagcagtgcccttcaagca
aaatctgcaggagttaaaacatcttgttttgcttcgtttcctgagtacttggttgtgcag
ataaagaagttcacctttggtctggactggatacccaagaagcttgatgtttccatagac
atgccagacctactagacatcaatcacctccgtgccacaggcctccagccaggagaagag
gaacttccagacattgctccacccattgtcatccctgacgaccccaaagatcacatgatg
aaccatttcatggagctgccagatatcgatgattcttcagtgatgcaactagcggagatg
ggcttcccactggaagcatgtcggaaagctgtttattatactggcaacttgggtgcagag
gtggctttcaactggatcattgcacacatggaagaaccagactttgccgagccgctcatt
atacctggttttggaggagttgctgccactggagcagctggtttaggggtcattgggtta
gataaccaacctccagaagagatggtagctattgtcgtctccatgggcttccagaggaat
gtagctattcaggcactaaaggcaacaaataataatttggagcgtgcactggactggatc
ttcagtcaccctgagcctgaggaagagagcgagacagcttcggatgtgatgtatatggag
aataatgctaatgccaacatcctcacagaggcaggttcagaggggcccagggtcagagat
gggtctggaagatatgagctctttggattcatcagtcacatgggaacatccacgatgagt
ggtcactatgtttgtcatctgaaaaaggaaggcagatgggtgatctacaatgaccttaaa
gtctgtgcctcagaacgacctcccaaagacctgggctacatttacttctaccacaggata
ccaagttag
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integrated database retrieval system
