Crocodylus porosus (Australian saltwater crocodile): 109310941
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Entry
109310941 CDS
T07440
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109310941 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109310941 (SMARCC1)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109310941 (SMARCC1)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109310941 (SMARCC1)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109310941 (SMARCC1)
PBAF complex
109310941 (SMARCC1)
GBAF(ncBAF) complex
109310941 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
109310941
NCBI-ProteinID:
XP_019392240
Ensembl:
ENSCPRG00005001885
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
ARRKDGGPTGKFWESPDTVSQLDSARVWLGKHYKKYVQADAPTNKTLAGLVVQLLQFQED
AFGKHVTNPAFTKLPAKCFLDFKAGGTLCHVLGAAYKYKNEQGWRRFDLQNPSRMDRNVE
MFINIEKMLVQNNCLSRPIIYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSP
TSLDDDEWLRPVMKKDKQVLVHWGFYPDSYDTWVHASDIDAEIEDPPIPEKPWKVHTKWI
LDTDVFNEWMNEEDYEVDENRKPVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPS
PPPTPVESRKKTGKKGQAGLYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNP
KKDSENTPVKGGTVADLDEQDEETVAAGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIII
PSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTAC
RRNLTGDVCAVMRVHAFLEQWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHI
RTPQVPAAQQMLSFPEKNKEKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLL
LEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQS
GNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKV
DPTYGLESSCIAGTGPDEPEKLDGAEEEKMETETDGQQSEKVESKGEGEMEEGEKVQEGE
NERNPEKEQDSEVTADVKPEEKEAEENKENVDASKDKESDTGKKKVEHEISEGNVATAAA
AALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQ
RQQLLTERQNFHMEQLKYAELRARQQMEQQHSQNAQQSHQHSSGPGMNPLGAPTHPGLLP
HQQPPPYPMMHHQMPPPHPPQPGQMPGPGAMIPGQPMPGRMMPSVSANIHPPGSGPAPPG
MPPMSGNIIGPRVPLAAPNGMYPPPSQQPPPPAEGVTAPAAGAPPASTAP
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
gcgcggcgcaaggacggcggacccacgggcaagttctgggagagccccgacaccgtgtcg
cagctggactcggcgcgcgtctggctcggcaagcactacaagaagtatgtccaagcagat
gctcctaccaataaaacattggctgggctggtggtgcagctgctacagttccaggaagat
gcctttggaaaacatgtcaccaatcctgccttcaccaaacttcctgcaaagtgcttcctg
gatttcaaagctggaggcacattatgtcacgttcttggtgctgcttacaagtataagaat
gaacaaggatggcggaggtttgaccttcagaacccatcccgaatggatcgtaatgtggaa
atgttcattaacattgagaagatgctagtgcagaataattgtttgagcagaccaatcatc
tacctcattccagatatagagctgaagttggctaacaagctaaaggatattgtcaaacgt
caccagggaacagtaactgaggagaagtcaaaggcaacccaccatgtttatcctagtcct
acctcactggatgatgatgaatggttgagacctgtgatgaaaaaggataagcaagtgctg
gtacactggggcttttacccagacagctatgacacttgggtgcatgctagtgatatagat
gctgaaattgaagatcctccaattccagaaaaaccatggaaggttcatacgaaatggatt
ttggacacggatgtatttaatgagtggatgaatgaagaggattatgaagtggatgagaat
aggaagccagtgagttttcggcagcgaatctctatgaagaatgaagagccagtgcgtagt
cctgagaggagagacagaaaagcagcagcaagcaccaggaaaagaaaacattcgccttcc
cctcctcccactccagtggaatcaagaaaaaagactggaaaaaaaggacaagcaggtctg
tatgggaaaaggagaggtcagaaagaagaggatgagcaagaagatcttaccaaggacatg
gaagacccaacacctgtacccaacatagaagaagtggtacttcccaaaaatgtgaaccca
aagaaagacagtgaaaacaccccggtgaaaggaggaacagtagcagacctagatgaacaa
gatgaagagacagtggctgcaggaggaaaggaagatgaagatcctaataaaggtgatcag
agccgatcgattgatccaggtgaagacaatgtcaccgagcagacaaatcacatcattatt
ccaagctatgcatcctggtttgactacaattgcattcatgtaatcgagcgccgtgctctt
ccagagttcttcaatgggaaaaacaaatccaagactccagaaatatacctggcttaccga
aacttcatgattgatacgtatcgcttgaaccctcaggagtacttgaccagcaccgcttgc
cgacggaacctgaccggagacgtatgtgctgtaatgagggtccatgcctttctggagcag
tggggtctcattaactaccaagtggatccagaaagccgtcccatggccatgggcccccct
cctactcctcatttcaatgtgcttgcggatactccctctggactcatgcctctccatatc
cgaactcctcaggtccctgctgctcagcagatgttgagttttcctgaaaaaaacaaagaa
aagcccaccgacctacagaattttggactccgcacagacatttattcaaagaagacctta
gcaaagagcaaaggagccagtgctggaagagaatggacagaacaagaaacgctactgcta
ttagaggctctggagatgtacaaggatgactggaataaggtctctgagcatgttggcagc
cgtacccaggatgagtgtattctccattttctgaggcttcccatcgaggacccgtacttg
gaaaactccgatgcatctctaggcccgctggcttaccaacctgtgcctttcagccagtct
ggaaacccagtgatgagcactgttgcttttctggcatctgtagtggatccccgggtggcg
tctgctgcagctaaagctgctttagaggaattttctcgggtgcgagaggaggtaccactg
gaacttgttgaagcccatgtcaagaaagtacaggaagcagcaagagcctctggcaaagtg
gatccaacttatggattagagagcagctgcattgctggaacaggtccagacgagccagag
aaattggatggagctgaagaagaaaaaatggaaaccgagacagacgggcaacagtcagaa
aaggtggaaagtaaaggagaaggtgaaatggaggaaggtgaaaaagttcaggaaggagaa
aatgagagaaatccagaaaaggagcaagacagtgaagtgactgctgatgtcaagccagaa
gagaaggaagcagaggagaacaaggaaaacgttgatgcaagcaaagacaaggagagtgat
actgggaagaagaaagtggaacacgagatctctgaaggaaatgtagcaacggctgcagct
gcagctcttgcctcagctgccaccaaagcaaagcacctggcagcagtggaagagagaaag
atcaaatctttggtagctctcctggtagaaacacaaatgaagaaactggagatcaagctt
cgtcattttgaggagctggaaacgatcatggacagagagaaagaagctctagaacagcag
aggcagcaactgctgacggagcgccagaacttccacatggagcagctgaaatacgctgaa
ttacgggcccgccagcaaatggagcagcagcacagtcagaacgcccagcagtcacaccag
cactccagcgggccgggcatgaacccactcggggcgcccacacatccgggcttgctgccc
catcagcagccccctccgtaccccatgatgcatcaccagatgccccctcctcacccaccg
cagccaggtcagatgccaggacccggtgcgatgatacctgggcagcccatgccgggccgg
atgatgccaagcgtgtctgccaacatccacccgccaggcagcggccctgcgcccccgggc
atgccgcccatgtcgggaaacatcatcggacctcgcgttcccctcgcagctccaaacggc
atgtatccccctccatcgcaacagccaccgccgccagctgaaggggtgactgcccctgcc
gcgggagcaccgccggcctccacagccccctaa
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integrated database retrieval system
