Crocodylus porosus (Australian saltwater crocodile): 109314053
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Entry
109314053 CDS
T07440
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109314053 (RC3H2)
04121 Ubiquitin system [BR:
cpoo04121
]
109314053 (RC3H2)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109314053 (RC3H2)
Ubiquitin system [BR:
cpoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109314053 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
109314053
NCBI-ProteinID:
XP_019396540
Ensembl:
ENSCPRG00005010607
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDATSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPETTGKMVPSTNGIASLESGVPQLIPRCADTSLRSLENVKKGGKSGANGHNVSGSPTE
SLSENKIGSPPKTPVSQAAATSAGPPNIGTEMNSVPPKSSPFVPRVPVYPPHSENVQYFQ
DPRAQMSYEVPQYPQTGYYAPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPSEQRTVPLPREPCGHLKTSYDDQLRRKPEQW
AQYHAQKTPLVSSTLPMAATSPTPPSPLFNVDFSTEFSESVTDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNTVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDST
SSARYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWSSLD
EGSRLTLNLLSKEIDLRNGESDYTEDSADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHSLKQRQKEPLEQKRQSLGEDLVILEEQKAILPVTSCFS
QPITASVSSASCLPISTSVSVGSLILKTAHIMSEDKNNFLKPAVNGKMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagagtttctgtcctgtccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagtttaggttgctcccacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcacttcttcaattagttggagcccaggtaccagat
catcagacagtaaagttaagtaacctaggagagaacaaacattatgaggtagcaaagaag
tgcgttgaggatttggcactatacctgaaaccactaagtggaggaaagggtgttgctagt
ttgaatcagagtgcactgagccgtccaatgcaaagaaagctggtgacgctggtaaattgt
cagctggtggaggaggagggtcgggttagagctatgcgtgcagctcgttcacttggagaa
agaactgtaaccgaattgattttgcagcaccaaaatcctcagcagctgtctgccaatctt
tgggctgctgtcagggcacgaggatgccagttcctagggccagctatgcaagaagaagct
ttgaagcttgtattactggcactggaagatggctctgcactctcaagaaaagttttagta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatctaaaacgagcattggt
catgttgtgcagctactgtatcgagcatcatgctttaaggtcacaaaaagggatgaagat
tcttctctgatgcagctgaaagaggaatttcggagttatgaggctttgcggagagagcat
gatgcccaaatcgttcacattgccatggaagcaggccttcgtatatcaccagaacagtgg
tcttcccttctttatggtgacttagcacataagtcacacatgcagtccattattgataag
cttcaatcaccagagtcatttgcaaagagtgtacaggagttgacaattgtcttgcaacgt
acaggtgatccagcaaacttaaacagactgaggcctcacttagagcttctagcaaacata
gatcctaatccagatgcaacgtctccaacatgggagcagctggagaatgcaatggtggct
gtgaagactgtggtacatgggctggtggactttattcagaactatagtagaaaagggcat
gaagcaccacagccacaaccaaacagcaaatataaaacaagtatgtgccgagatctgcga
cagcaagggggatgtccacgaggaactaactgtacattcgctcactctcaggaagagctt
gaaaagtatcgtttaagaaacaaaaaaatcagtgcaacagtgagaaccttccctcttcta
aacaaagttggcgtaaacagcactgtttcaaccacaacaggaaatgtaatctctgtcata
ggaagccctgaaacaacagggaagatggtgccaagtactaatgggattgcaagtctggaa
agtggtgttccccaattgattccccgctgtgctgacacttccttaagatctttggagaat
gtcaagaaaggggggaaatctggagccaatggtcacaacgtctctggatcccctacagaa
tcattatctgaaaataaaattggctctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagagatgaattctgtgcctccaaaatccagc
ccatttgtacccagagtaccggtctatcctccacattctgaaaatgttcagtattttcaa
gatccgcgtgcccagatgtcctatgaagttccacagtacccacagacgggatactacgca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgctgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgccccagtgtatgacagcaggcgtatctgg
cgtccacagatgtacccaagagatgatattattaggagcaattctttacctccgatggat
gtgatgcactcatctgtctatcagacatcattgcgtgagagatataactctctggatggg
tattactctgtggcttgccaacctccaagtgagcaaaggactgtgcctttaccaagggag
ccttgtggtcacttgaagaccagttatgatgatcagttacgacgaaagccagagcaatgg
gcacaataccacgcacagaaaacccctcttgtatcctcaacacttcctatggcagcaaca
tctccaacaccaccttctcctctcttcaatgtggacttcagcacagagttttcagagagt
gttactgacttgagtggtactaaatttgaagaagaccatctttcccactactcaccctgg
tcctgtggcactattggctcctgcataaatgctatcgattcagagcccaaggatgtaatc
gccaattcaaatactgtgttaatggatttggacagtggagatgttaaaaggagagtgcat
ttgtttgaaactcaaagaagggcaaaagaagaagatcctatcattccctttagcgatgga
ccgatcatctccaagtggggtgcaatctccagatcatctcgcacaggttatcacacaaca
gaccctattcaagccactgcttcccaaggaagtgctactaagcccataagtgtatcagat
tatgtcccatatgtcaatgctgttgattcaagatggagttcttatggctcagattctact
tcatcagcacgctatatagaacgggataggttcatagtgacagatttatctggtcacaga
aagcattccagcactggagatttgctgagtattgaactacagcaggccaaaagtaattca
ttgttacttcagagggaggctaatgcgctagccatgcaacagaagtggagttctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
agtgactatactgaagacagtgcagatacaaagccagatcgagacattgaattagagctt
tcagcccttgatactgacgaacctgatggacagggtgaacaaatagaggaaatcctggac
atacagctaggtatcagttcacaagaagatcagctgctcaatgggacaactgtagagaac
ggtcattcactaaagcagcgccaaaaggaacctttggagcagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaagcaatcctgcccgtaacttcttgcttcagt
cagcccatcacagcatctgttagcagtgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaacaacttttta
aagccggctgtgaatggcaagatggttaacagctga
DBGET
integrated database retrieval system
