Crocodylus porosus (Australian saltwater crocodile): 109323291
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Entry
109323291 CDS
T07440
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109323291 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
109323291
NCBI-ProteinID:
XP_019410285
Ensembl:
ENSCPRG00005001239
LinkDB
All DBs
Position
Unknown
AA seq
2166 aa
AA seq
DB search
MKPLENSWLFPLLTVILRCVCSSFISVNRGVKVMKGQSVFLSKDDLQFSIPRVKDACKVE
VVINEPITQRVGKLTPQIFDCHFLPDEVKYTHNGCPILDEDSVRLRLYRFTETETFTETF
TLQVQLLEPDCNVVKMSSNILEVPEFYGLSRVIDRNVLTFDYDRRINLECVITMASLETH
LPAHGQVVIGEPQQEEPRGDQPHSFFSTSKQRAAQSCRNGNCTQGLKTIQITKMSCGEFL
LTGIRYQHLDPPSPNIDYIPIRLDLMDSRSKILHKTEYAWLPVRIRGAIPNQIPKAAFMA
TFVLEVDQFILSPMTTATIDAEDSETPKSLLVFNITKPPPQGYITHLSDHTRPITSFTWK
DLSEVLIAYQPPNNSHTERRNYEDTLFGSSKRFALIETECLNLLEGQSRPITWQQFQIVD
NDNISGVRLVTVDGLNHGHLTVRGGKGFMFTVSDLKTGVVCYHHDDSDSTKDFVVFRIFD
GRHSIRHKFPINILPKDDSPPFLISNVVIEVYEGQTVLIQGSMLQASDVDSSDDYIFFNM
TKLLQAGEIMKKPGPDLIGYPVTGFFQRDLFNGIIYYRHFGGEIFEDSLEFVLCDSHDPP
NLSEPQVVIVHIIPVDDQLPKEDPGATRHLIVKETEIAYLTKKQLHFIDMEEKERDLIYT
VTTSPFFSSIHGHSEAGKLFMVDSIPKLVKDPAALALRSFTQHAVNYMKVAYMPPIQDIG
PEPQHVQFVFSVSNQHGGNLFGICFNITILPVDNQTPEVFTSHMKVEEGGLCTITWGHIL
LSDMDTEQENLHICLKRQPLHGAVLLDGFAMSEGDRFACEDLHTLKVRYQHDGSETLNDD
IFFAATDGFHSVEFILQVKVLPVNDEPPVMKAGLIPLIQCLEGEEVVITPEHIYATDADS
DDMRLMFMQARKSYHGVVRKAGIIVDRFSQADVVSGIVTYKHTSGEIGLNPCFDTLTFII
SDGEAGPDVNDCCFDGPLPPPVPLHDSFPVYDLNITILPVDNQPPSIATGAMFVVDEGFS
AVLTTNHLFATDPDTAADDLEFVLVSPPQCGYIENILPSPGFEKSNIGISIASFQLKHLK
AFQVNYVQSRHVRMEPTSDQFMLYVTDGKHHSVETPFYVLINPTNDEVPEFIARNITVQE
GQIKELDPSVINAVDLDVPQDCLIFTVAQKPQHGFLISGTYGNDIMHYKQLTSNHHNHGY
PVHDFSMELLKNGMRLIYMHDDSETLADGFTIQLSDGKHKVLRTISVKVIPVNDEKPMLS
KKDEIEVNMGETRIISSAVLSAEDKDTPRERIYYLFERIPENGQLQLKVGRDWVTLHTGM
NCTQEEIDLNLVRYVHTGAIGSKIQDGFTFHLWDGDNQSPALEFFISIKDIEKGDIAVFI
RPLTVSKGDRSYITTDALLAIDGTDKPEELLYVITSPPQYGQIEYVRFPEIPITSFSQMD
IAGQAVCYVHSSKAAASEDMFRFIISNGLRTKHGMFTITLETMDQVLPTVSRNKGLRLVE
GAMALISPDVLQISDPDTSSENLTFLLAQLPQYGQLYYRGAVLLQHNFTQQDVDNMDVAY
KHGGGDSQIDRFTFVATDRTNQGFIINGRVQVEPVAFTIQVDHLDRTAPKIVHLHCSCNV
ELLKNGSFGIYITARSLKASHPNTEDDQIIFKILQGPRYGYLENTTTGRCIQEEFSQKDL
NSKIVLYVINPAWAVNSDSLEFQVTDPTGNSGTPQILELKWSRIEMQQAAYEVCENVGIL
SLKITRSGHSIDSAFVTVKVNEASAVLGKDFTIPPSKLIQFDPGMSTKKWNIVITYDGLE
EDDEVFEVVLNSPVNAILGTRTKAVVKILDSKRGQCSFFHSSGQSKNNLWRTDTLLPVSS
SSLLPSSPGIVHLERIPLSSSKGMMMQKGNMLPEFKLVNRSRTRLRAVGNGKIVPPSSMF
RNGTDVVFKYHGLVSLRVEEDTSSVNANKKAEVLVINQGELKSNVVSSRKTEVPQADKAE
LTSVLHSNHQDLGLSFPKGCTSDLKGLLHYEERVQKLFQCDGISWKLWDSKSKMVNLKKC
PSGWSHHDGSCYFLIAEHKVTWNTAARACREQYFGNLASVVTKQHMQWLWNFSGRKPFWI
GLNDRENPGHWEWNGGEPVTYTNWRTVSSRLSRKGKNCVLVQRQGKWQAADCRKGRRHNY
VCSRKL
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgaagccccttgagaacagctggctgtttccactgctcactgttatcctgagatgcgtc
tgttcctcctttatcagtgtcaaccgtggggtaaaagtgatgaagggacagtctgtcttt
ctgtcaaaagatgacctgcagttttctatccccagagtgaaagatgcctgcaaagtggaa
gttgtgattaatgagccaataacacagagggttgggaaactaactccacagatttttgac
tgtcatttccttcctgatgaagtcaagtatactcacaatggctgtcccattttagatgaa
gactcggtcaggcttaggctgtacaggtttacagaaactgaaacattcacagaaacattc
acccttcaggtgcagttacttgagccagactgcaatgttgtcaaaatgagttccaacatc
ttggaagtccccgagttttatggcctgtccagagtgattgacaggaatgtgctcactttt
gactatgacaggaggataaacctggagtgtgtcattacaatggcctccttagaaactcat
ctaccagcccacggtcaagttgtcattggagaacctcaacaggaagaacctcgtggagac
caaccccatagcttcttttccacttctaagcagagagcagcccagagttgcaggaatggg
aactgcactcaaggactgaagaccattcaaatcaccaaaatgagctgtggggaatttctg
ctgactgggattcgatatcagcatcttgatcctccttcacccaacattgattatattcct
atccgactggatctcatggacagcagaagcaaaattctgcacaagacagagtatgcctgg
ctccctgtccgtatcagaggtgccattcccaaccagatccccaaagctgccttcatggca
acattcgtcttggaggtggaccagtttattttgagtcccatgacaacagcaacaatagat
gctgaagacagtgaaacacctaaatccttgctagttttcaacattaccaagccaccaccg
cagggctacatcactcatctgtcagaccacaccaggcctatcacctctttcacatggaaa
gatctcagtgaggtgcttatagcatatcagcctccaaacaacagccatacagagaggagg
aattatgaggatactctgtttggatcctctaaaagatttgccctaattgagacagaatgt
ctcaatctcctagaggggcaatcccgaccaatcacatggcaacagtttcaaattgtagac
aatgacaacattagtggtgttcgtttggtcacagttgatggcttgaatcatgggcacctc
actgtaagaggggggaaaggattcatgttcacagtctctgatcttaagactggagttgtt
tgctaccatcacgatgacagtgactctacaaaggattttgtggtcttcaggatttttgat
ggccgacacagtattcgtcacaagtttccaatcaacatcctacctaaagatgacagtccc
cctttccttatcagcaatgttgttattgaagtgtatgaagggcagacagttttgattcaa
ggctccatgctccaggcttctgatgtagactccagtgatgactacatattctttaatatg
accaaactattgcaggctggggagattatgaagaaaccagggccagacctcataggatat
cctgtcactggcttctttcagagagatctattcaatggaataatttattatcggcacttt
ggaggagaaatatttgaagattccctggagtttgtcctttgtgatagtcatgaccctccc
aatctctcagagccacaggtggtgatagtgcatattattcctgtggatgatcagcttcca
aaagaagatccaggggctacccgtcacctgattgtcaaggaaactgagattgcttatcta
actaagaaacagctccatttcatagacatggaagaaaaagagagggacctcatctacaca
gtaaccacctccccattcttctcttccattcatggccactcagaggctggaaagttattt
atggtggacagcatacccaagctagtcaaggatcctgctgctctggcactgagatcattc
actcagcatgccgtgaactacatgaaagttgcctacatgccccctatccaggacattggg
cctgagccacagcatgtccagtttgttttttcagtcagcaatcaacatggcgggaacttg
tttgggatctgctttaacattacaattcttcctgtcgacaatcaaactcctgaggtattt
accagccatatgaaagtggaagaagggggactgtgtaccattacctgggggcacattctc
ctctcagatatggacacagaacaggagaacctccacatctgcctcaagagacagcctctg
cacggagctgttttgctagatggctttgctatgagtgaaggtgacagatttgcctgtgag
gatctgcacactcttaaagtcaggtatcagcacgatggctctgagactctgaatgatgac
atcttctttgcagccacagatggctttcattctgtagagttcatcttacaggtcaaggtg
ctacctgtgaatgatgagccacctgtcatgaaagctggcctcattcccctaatacagtgt
ctggaaggggaggaagtcgttatcactccagagcatatttatgccactgatgcagacagt
gatgacatgaggctgatgtttatgcaagctcgaaagtcctaccatggggtggtgaggaaa
gctggtatcattgtggatcgattttcccaagctgatgttgtctctggcatagtgacctac
aagcacactagtggggagattggcctgaatccttgttttgacaccctaacctttattatc
tctgatggtgaagctggcccagatgtcaatgactgctgttttgatggacctcttcctcct
ccagtaccacttcatgattcgtttccagtatatgatctaaacattactatacttccagtg
gacaaccagccaccatccattgcaactggtgccatgtttgttgtggatgagggtttctca
gctgtgcttactactaaccatttgtttgccactgaccctgacaccgcagctgatgactta
gagtttgttttggtttctcctccccagtgtggttacattgaaaatatactaccttctcct
ggttttgaaaagagcaacattggtataagtatagcttcatttcagcttaaacatctgaaa
gccttccaggtcaactatgtacaatccaggcatgtgaggatggaaccaacttcagaccag
tttatgctttatgtcactgatgggaagcatcattcagtagagacaccattttatgtcctg
atcaacccaacaaacgatgaagtcccagaattcatagcaaggaacattactgtgcaggag
gggcagataaaagaactggatccctctgtaattaacgcagttgatttggatgtacctcag
gattgcttgatatttactgttgctcagaagccccagcatggattcctcattagtggaact
tatggcaatgatatcatgcattacaaacagctaactagcaaccaccacaaccatggatat
cctgtgcatgacttttctatggagcttcttaagaatggaatgaggttgatatacatgcat
gatgactctgagactcttgctgatggttttacaatccagctatcagatgggaaacataaa
gtcctcagaaccatttcagtaaaggtcattccagttaatgatgagaaaccaatgctgagc
aagaaggatgagatagaggtgaacatgggtgaaacgcgaatcatttctagtgctgttctg
tcagccgaagataaagacacccccagggaaagaatttactatttatttgaaagaattcca
gaaaatgggcagcttcagctcaaggtaggcagggactgggtgactctccatactggaatg
aactgcactcaggaagaaatagatctgaaccttgtgagatatgtgcatacaggagctata
ggatccaagatccaagatggtttcacatttcatctgtgggatggagacaaccagtcccca
gcactggaattcttcatcagcatcaaggacatcgagaagggagatattgctgtttttata
aggccacttactgtgtcgaagggggatagaagctacataacgacggatgcccttcttgct
attgatggaactgacaaaccagaggaactcctctatgtgataacatctccacctcagtat
ggacagatagagtatgtcaggtttccagaaatccccatcacaagtttcagccaaatggat
atagcaggccaggcagtttgctatgtccacagtagcaaggcagctgcttctgaagatatg
ttcagattcatcatcagcaatggactgaggactaaacatgggatgttcacaatcactctg
gagacaatggaccaagttttgcctacagtgtctagaaacaaagggttgagattagtggaa
ggcgctatggcactcatttctcctgatgtcctgcagatttcagacccagacacttcctca
gagaaccttaccttcctcttggcacagctccctcaatatggccaactgtattaccgaggg
gctgtactcctgcagcacaatttcacccagcaagatgtggacaacatggatgtagcatat
aaacatggaggaggggattcccagattgacagatttacatttgtggcaacagataggact
aatcaaggcttcatcataaatgggagggtgcaagtagagccggtggcattcaccattcag
gtggaccatttggacagaactgcaccaaaaattgttcatctccattgttcttgtaatgtg
gagctcctgaagaatggcagttttgggatttatattactgccaggtccctgaaagcctct
catcccaatacagaagatgaccaaatcatttttaagattttacaaggtcctcgctatggc
tacctggaaaatacaacaacaggcaggtgcatccaggaggaattcagccaaaaagattta
aatagcaaaatcgtactttatgtcatcaatccagcttgggcagtgaattcagacagcttg
gagtttcaagtcacagatcccactgggaactctggcaccccccaaattttggaactgaag
tggtctcgaattgaaatgcaacaggctgcatatgaagtgtgtgagaatgtgggaatcttg
tctttgaaaatcaccaggtcagggcattccatagactctgcctttgtcacagtgaaggtc
aatgaagcatctgctgtacttggcaaggattttactatacctccttctaagctcattcag
tttgatccaggaatgtcaaccaagaagtggaatatagtaattacctatgacggattagag
gaagacgatgaagtctttgaagtagttctgaactcccctgtgaatgcaattcttggcacc
aggacaaaagctgtagtgaaaattttggactcaaaaagaggtcagtgcagctttttccat
tcctctggccaaagcaagaacaacttatggaggacagacacattgcttccagtttcctcc
agctccttattgccctccagccctggcattgttcacttggaaaggatcccactgtcctct
tccaaagggatgatgatgcagaaggggaatatgctaccggaattcaagttggtgaatcgg
tcaaggactagactaagagcagttggaaatggcaaaatagttcctccatcatccatgttt
agaaatggaactgatgtggtttttaaatatcatgggctggtatctctcagagtagaagaa
gatacttcatcagttaatgcaaacaaaaaggctgaagtgttggtaattaaccaaggggag
ctgaaaagcaatgtggtctcctccaggaagacagaagtcccacaagctgataaggcagag
ctgacatctgtattacattctaaccatcaggatctgggtctctcctttccaaagggctgc
acatcagatttaaaggggctcttacattatgaagaaagagtccaaaaattatttcagtgt
gatggcatttcatggaagttatgggattcaaaaagcaagatggttaacctgaaaaaatgc
ccctctggatggagccatcatgatggtagctgctatttcctaatagctgagcacaaggtc
acctggaataccgctgctcgggcttgccgggaacagtactttgggaatctagcaagtgtg
gtcactaaacaacacatgcagtggttgtggaacttcagtggaaggaagcctttttggata
ggcttgaatgaccgagaaaatcctggccattgggagtggaatggaggagaaccagttact
tacacaaactggagaacagtctcttctcgtctttcaaggaagggaaagaattgtgttttg
gtacagaggcaagggaaatggcaagcagcagattgcagaaaaggcagacggcacaattat
gtgtgttcaagaaagctgtaa
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integrated database retrieval system
