Collimonas pratensis: CPter91_0968
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Entry
CPter91_0968 CDS
T04306
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
cpra
Collimonas pratensis
Pathway
cpra01501
beta-Lactam resistance
cpra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPter91_0968
01503 Cationic antimicrobial peptide (CAMP) resistance
CPter91_0968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_0968
01504 Antimicrobial resistance genes [BR:
cpra01504
]
CPter91_0968
Transporters [BR:
cpra02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CPter91_0968
Antimicrobial resistance genes [BR:
cpra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CPter91_0968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
AMP03356
UniProt:
A0A127QSX9
LinkDB
All DBs
Position
complement(1002285..1005437)
Genome browser
AA seq
1050 aa
AA seq
DB search
MGKFFIDRPVFAWVLAVFILLGGALAITQLPVAQYPSIAPPTIVVSAAYPGATAQTIDDS
VTSLIEQEMNGADGLQYIESQSQADGSVSITVTFSPETNADLAAVDVQNRLKRVEARLPA
VVTQNGVQVTKSRSNFLMFIGLSSSDGKLDPIALGDYLSRNVLNEIKRVPGVGQAQLFGT
ERAMRIWIDPAKLVGLSLTPADVTAAITAQNALVAGGTLGDLPSPGSQQISATVVATGQL
NTVEQFGKIQLRANSDGSIVRLRDVARIEIGGQSYATAGRLDGKPTSFVGVQLSPTANAL
GTATAVKAKMKELSKYFPAGVTYEIPYDTSKFVKISIEEVVKTLVEAIILVFLVMYLFLQ
NIRYTLIPTVVVPVALMGTFATLLLFGFSINVLTMFGMVLAIGILIDDAIVVVENVERIM
SEEGLSPRDATRKAMGQITGALIGITLVLIAVFIPMAFFSGAVGAIYRQFSLSMVASMVF
SVLMAFTLTPALCATILKPVEKGHHHEKTGFFGWFNRKFNATTNSYQGFVAKMLGKTGRY
LLVYGAILICVGLLYTRLPASFLPSEDQGYIVTNVQLPAGASSNRTLEVIKQIEAYYGKL
PAVANVVAITGFSFSGNGQNAGLVFTPLKDWSERGPAESADAIAGKAFGVFSQIKDAIVY
PLNPPPIPELGNATGFTFRLQDRSGQGHAALTAARNQILGMASQSKILAGVRPEGLEDSP
QLQLNIDRDKANALGVSFSAINSTLSTALGSSYVNDFPNQGRQQRVIVQADAPQRLQPED
LARLYVKNTQGTMVPFSSFTTSEWIKGPVQLSRYNGYPAMKISGGAAPGHSTGEAMDEME
ALTAKLPPGFGFEWTGQSLEEKTSGSQAPMLYLLSLIAVFLVLAALYESTSIPLAVMLVV
PLGILGALLGVTLRGMPNDVYFKVGMITVVGLSAKNAILIIEFAKDLQAEGKGLIEATLE
AVHLRFRPILMTSFAFILGVLPLAIKTGAGSGSQRAIGTGVMGGMITATVLAVFLVPVFF
VVVRKFFKGSERQQRLHDANKKIDVENQHV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtttttcatcgaccgccccgtatttgcgtgggtgctcgccgtattcatcctg
ctcgggggtgctctggcgatcacgcaattaccggtggcccagtatccttcgattgcaccg
ccgacgattgtcgtcagcgcagcctatcccggcgctaccgcgcaaaccatcgacgatagc
gttaccagcctgattgaacaggaaatgaacggcgccgacggcttgcagtacatcgaatcg
caaagccaggccgacggctccgtatccatcaccgtgacgttttcgccggaaaccaacgcc
gacctggccgcggtggatgtgcagaaccgcctgaaacgcgtggaagcacggttgcctgcg
gtggttacgcagaacggcgtgcaagtcaccaagtcgcgcagcaacttcctgatgttcatc
ggtctttcatcgagcgacggcaagctcgacccgatcgcgctgggcgactatctgtcgcgt
aacgtgctcaatgaaatcaaacgcgtgccaggcgtcggccaggcacaactgttcggtacc
gaacgcgccatgcggatctggatcgatccggccaaactggttggcctgagtctgactccc
gcagatgtcactgccgcaatcaccgcgcaaaatgcgctggtcgccggcggtacgctgggt
gatctccctagcccaggcagccagcagatttctgccaccgtggtcgctaccggccagctg
aatactgtcgaacaattcggcaagatccagctgcgtgccaattcggatggttccatcgtc
cgtctgcgcgatgttgcgcgcatcgaaatcggcggccagtcttacgccactgccggccgt
ctcgacggcaagccgacttccttcgtcggcgtgcagctatcgccgaccgctaacgccctg
ggcaccgcgacagccgtcaaagccaagatgaaagagctgtccaagtacttccctgccggc
gtcacttacgagatcccttacgacacctcgaaattcgtcaagatctcgattgaagaagtg
gtcaagaccctggtggaagcgatcatcctggtgttcctggtgatgtacctgttcctgcaa
aacatccgttacaccctgattcctaccgtcgtggtgccggtggcgctgatgggtacgttt
gccacgctgctgctgttcggtttctcgatcaacgtgctgaccatgttcggcatggtgctg
gcgatcggtatcctgatcgacgatgcgatcgtggtggtggaaaacgtcgagcgcatcatg
agcgaagaaggcttgtcgccgcgcgatgcaacccgcaaggcaatgggccagatcaccggt
gcgctgatcggtatcaccctggtgctgatcgccgtgttcatcccgatggctttcttcagc
ggcgcggtgggcgcgatctatcgccagttctcgctgtcgatggtggcgtccatggtgttc
tcggtattgatggcatttacgctgacgccggcgctgtgcgccaccatccttaaaccggtg
gaaaaaggtcatcatcacgagaaaaccggcttcttcggctggttcaaccgcaagttcaac
gctaccaccaacagctatcagggtttcgtcgccaagatgctgggcaagaccggccgctat
ctgctggtgtatggcgcgatcctgatctgcgtgggcttgctgtacacccgtctgccagca
tcgttcctgccgagcgaagaccagggctacatcgtcaccaacgtgcagttgcctgccggc
gccagcagcaaccgcaccctggaagtgatcaagcagatcgaagcctattacggtaagctg
cctgcggtcgccaatgtggtggcgattaccggcttcagcttctccggcaacggccagaat
gccggcctggtattcaccccgctgaaggactggagcgaacgcggacctgccgaatcggcc
gatgcgattgccggcaaggcatttggcgtgttctcgcaaatcaaggacgccatcgtctat
ccgctgaacccgccgccgatcccggaactgggtaacgccaccggcttcaccttccgtctg
caagaccgttcgggacaaggacatgctgcattgaccgcagcgcgtaaccagatcctgggc
atggcatcgcagagcaagatcctggctggcgtgcgtcctgaaggcctggaagattcgccg
cagctgcagctcaatatcgaccgcgacaaggcgaatgcactgggcgtatcgttcagcgcc
atcaacagcacgctgtcgaccgcgctgggttcttcctacgtcaatgacttcccgaaccaa
ggtcgtcagcaacgcgtgatcgtgcaggcagatgcgccgcaacgtctgcagccggaagac
ctggccaggctgtatgtcaagaacacccagggcaccatggtgccgttctcgtcgttcacc
acctctgaatggatcaaggggccggtgcagctgtcgcgctataacggctatccggccatg
aaaatttccggtggcgcagcgcctggccacagtaccggtgaagcgatggatgaaatggaa
gcgctgaccgccaagctgccgccaggcttcggcttcgaatggaccggccagtcgctggaa
gaaaagacttccggttcgcaagcgccgatgctgtacctgctgtcgctgatcgccgtgttc
ctggtgctggcggccctgtatgaaagcacttcgattccgctggcagtgatgctggtggtg
ccgctaggtattctcggcgccctgctgggggttaccttgcgcggcatgccgaacgacgtc
tacttcaaggtcggtatgattaccgtggtcggcttgtcggccaagaatgcgattctgatt
atcgagttcgccaaagacctgcaagccgaaggcaagggcctgatcgaagcgacgctggaa
gcagtccacctgcgtttccgtccgatcctgatgacttcgtttgcgttcatcctcggcgtc
ttgccgctggcgatcaagaccggcgccggttcaggcagccaacgcgccatcggtaccggc
gtcatgggcggcatgatcactgcgacagtactggcggtgttcctggtgccggtgttcttc
gtggtggtgcgcaagttcttcaagggcagcgaacgccagcaaagactgcacgacgccaac
aaaaaaatagatgtggagaatcagcatgtttaa
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