Collimonas pratensis: CPter91_4565
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Entry
CPter91_4565 CDS
T04306
Name
(GenBank) hemagglutinin family protein
KO
K21449
trimeric autotransporter adhesin
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_4565
Transporters [BR:
cpra02000
]
Other transporters
Pores ion channels [TC:
1
]
CPter91_4565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
AMP06871
UniProt:
A0A127QA51
LinkDB
All DBs
Position
complement(4714126..4718868)
Genome browser
AA seq
1580 aa
AA seq
DB search
MSTANSSVTSLSTSTSTGLSTANSSVTSLSTSTSTGLSTANSNVTSLSSGLSTTNSNVTS
LSTSASTGLSTTNSSVTSLSTSTSTGLSSTNSGVTSLSTSASTGLSTTNSSVISLSTSAS
TGLSTTNSSVTSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTANSNVTSLSSGLSTTNSNV
SSLSTSTSTGLSTANSSVSSLSTSTSTGLSTTNSSVSSLSTSTSTGLSTTNSSVTSLSTS
ASTGLSTANSSVTSLSTSTSTGLSTVNSNVSSLSSGLSTTNSSVSSLSTSTSTGLSTVSV
GVASLSTSSSSLKAAGVYDYFKADGKLDGSDPASVGAGSNSVAIGANSTNGGRNDVVSVG
AVNKERQIINVAAGTQLTDAVNVSQLTSLSTSTSTGLSTTNSSVSSLSTGLSTTNSNVSS
LSTSTSSGLSTTNSSITSLSTSTSTGLSTANSSVTSLSTSTSSGLSTVNSSVTSLSTSTS
TGLSTVNSNVTSLSTSTSTGLSTASSSVTSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTT
NSSVTSLSTSTSTGLSTVNSSVTSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTTNSSVTS
LSTSTSTGLSTTNSSVTSLSTSTSTGLSTANSSVTSLSTSTSTGLSTANSSVDSLSTSTS
TGLSTTNSSVTSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTT
NSSVTSLSTSTSTGLSTANSSVTSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTANSSVTS
LSTSTSTGLSTTNSSVASLSTSTSTGLSTANSNVDSLSTSTSTGLSTTNSSVTSLSTSTS
TGLSTVNSSVTSLSTSTSAGLSTTNSSVTSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTV
SSSVDSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTANSSVTSLSTSTSTGLSTANSSVTS
LSTSTSTGLSTTNSSVTSLSTSTSTGLSTVSSSVDSLSTSTSTGLSTTNSSVTSLSTSTS
TGLSTVSSNVDSLSTSTSTGLSTTNSSVTSLSTSTSTGLSTTNSSVNSLSTSTSTGLSST
NSNVNSLSTSTSSGLSTVTSNVSSLSTSVSGLQKSGVSNYFKADGKLDGSDDASVSAGSN
SVAIGANSTNGTRSNVVSVGSVGKERQIINVAAGTELTDAVNVSQLNSLSTSTSTGLGSL
STGLSSTNSSVNSLSTSTSTGLSTNTSSINSLSTGLSSNTSNVNSLSTGLSSTNSNVNSL
STSSSTGIASLSTGISSLSTGLSQVSSLSTGLSNITNGANSLSTTLTSLVDASKNATATG
ATLGGTTIGGSNGDGTVQTRGTNGTVINNVTAATCTSVNGVDATGSGLCAQATKDGATAI
GSNAQATDTNTTAVGFRALASQAGSVAIGNNARATGDPTVAIGQNALASGNNSVAMGANS
QATAANSVALGAGSVADQANTVSVGSVGNERRLTNVAPGINPTDGVNVSQLNNVQSQLGN
VQRIAYSGVAMSMAMSGAVMPNLEAGDKGVGVGLGTYQGYGALALQFKEISKTGNSAWGA
GASTTGNATGFSVGYGFKWK
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaccgccaacagcagtgtgacttcactgtcgacttcaacttccacaggcctgagc
accgccaacagcagcgtgacttcgctgtcgacttcgacttcgaccggcctgagtaccgcc
aacagcaacgtgacttccttgtcgagcggcctgagcaccaccaacagcaatgtaacttcg
ttgtcaacctcggcttcgaccggcctgagcaccaccaacagcagcgtcacctcgctgtcg
acttcaacatctaccggcttgagcagcaccaacagcggtgtcacctcgctgtcgacctca
gcttcgaccggcctgagcactaccaacagcagcgtcatctcgctgtcgacctcagcttcg
accggcctgagcaccaccaacagcagcgtcacttcgctctcgacttcgacgtcgaccggc
ttgagcactaccaacagcagcgtgacctcgctgtcgacgtcgacctcgactggcctgagc
accgctaacagcaacgtcacttcgctgtcgagcggtctgagcacgaccaacagcaatgtc
agctcgctgtcgacttccacttcgaccggcctgagcactgccaacagcagcgtgagctcg
ctgtcgacttctacttcgaccggcctgagcaccaccaacagcagcgtgagctcgctgtcg
acttctacttcgaccggcctgagcaccaccaacagcagcgtcacttcgctgtcgacttcg
gcctcgactggcctgagcacggccaacagcagcgtgacgtcgctgtccacctcgacctcc
acaggcctgagcacagtcaacagcaatgtcagttccctgtcgagcggcctgagcaccacc
aacagcagcgtctcgtcgctgtcgacttcgacctcgacaggcttgagcacagtcagcgtc
ggcgtagcatccttgtcgaccagttcgtccagcctgaaggcagccggtgtctacgattac
ttcaaggccgacggcaaactggacggctcggaccctgcatctgtcggcgccggttcgaac
tcggtggcgatcggtgcgaactccaccaacggcggccgcaacgacgtcgtatcggtcggc
gctgtcaacaaggaacggcaaatcatcaatgtggctgccggcacccaactgaccgacgct
gtcaacgtcagccagctgacttcgttgtcgacatcgacctcgactggcctgagcacgacc
aacagcagcgtcagttcgctgtcgaccggtctcagcacgaccaacagcaacgtgagctcg
ctgtcgacctcgacttcgagcggcctcagcaccaccaacagcagcatcacatcgctgtcg
acgtcgacctcaaccggtttgagcaccgccaacagcagcgtgacttcgctgtcgacgtca
acctcgagcggcctgagtaccgtcaacagcagcgtcacctcgctgtcgacttccacctcg
accggcctgagcaccgtcaacagcaacgtgacgtcgctgtcgacctcgacctcgaccggt
ctgagcaccgccagcagcagcgtcacctcgctgtcgacctcgacttcgaccggtttaagc
accaccaacagcagcgtcacctcgctgtcgacctcgacttcgaccggtttaagcaccacc
aacagcagtgtcacttcactgtcgacgtctacttcgaccggcttgagcacggtgaacagc
agtgtcacatcgttgtcgacgtcgacctcgactggcctgagcactaccaacagcagcgtg
acttcgctgtcgacctcgacctcgaccggcctgagcaccaccaacagcagcgtcacttcg
ctgtcgacctcgacctcgaccggcctgagcacgaccaacagcagtgtgacgtcgctgtcg
acctcaacctcgaccggcctgagcaccgccaacagcagcgtgacttcgctgtcgacctcg
acctcaactggcctgagtactgccaacagcagcgtggactcgctgtcgacttcgacctcg
actggcctgagcaccaccaacagcagcgtcacatcgctgtcgacttcgacctcgaccggc
ctgagcaccactaacagcagcgtcacctcgctgtcgacgtcgacgtcgaccggcctgagc
accaccaacagcagtgttacatcgctgtcgacctcgacctcgaccggcctgagcaccacc
aacagcagcgtcacatcgctgtcgacctcgacatcgaccggcctcagcaccgctaacagc
agcgtcacctcgctgtcgacctcgacttcgaccggcctcagcaccaccaatagcagcgtt
acatccctgtcgacctcaacctcgactggcttgagcaccgccaatagcagcgtgacttcg
ctgtctacctcaacttcgactggcttgagcacgaccaacagcagtgtcgcctcgctgtcg
acctcgacgtcgaccggcctcagcaccgccaacagcaatgtggactcgttgtcgacgtcc
acctcgactggcctgagcaccaccaacagcagtgtgacttcgctgtcgacctcgacctcg
actggcctcagtacggtcaacagcagcgtgacttcgctgtcgacctcaacctcggccggc
ctgagcacgaccaacagcagcgtcacctcgttgtcgacctcgacttcgactggcctgagc
acgaccaacagcagcgtcacttcgctgtcgacctcaacctcgaccggcctgagtacggta
agcagcagcgtcgactcgctgtcgacctcgacgtcgaccggcctgagcactaccaacagc
agcgtcacatcgttgtcgacctcaacgtcgaccggcctgagcacggccaacagcagcgtc
acttcgctgtcgacctcgacctcgaccggcctgagcactgctaacagcagcgtcacttcg
ctgtcgacctcaacctcgactggcctgagtactaccaacagcagcgtcacttcgctgtcg
acctcgacctcgaccggcctgagcacggtcagcagcagcgtggactcattgtcgacctcg
acttcgacaggcctgagcaccaccaacagtagcgtcacctcgctgtcgacttcaacctcg
accggcctgagcacggtcagcagcaacgtcgattcgctgtcgacctcgacctcgacaggc
ctgagcaccaccaacagcagcgtcacctcgctgtcgacctcgacctcaaccggcctcagc
accaccaacagcagcgtcaattcgctgtcgacctcgacgtcgaccggcctcagcagcacc
aacagcaatgtcaattcgctgtcgacctcgacgtcgagcggcttgagcaccgtcaccagc
aatgtcagctcgctgtcgacttcggtctctggcctgcagaaatccggcgtcagcaattat
ttcaaggctgacggcaagctggacggctcggacgacgcctctgtcagcgccggttcaaac
tcggtggcgatcggtgcaaattccaccaatggcacccgcagcaacgtggtgtcggtgggt
tccgtcggcaaagagcgtcagatcatcaacgtcgcagccggtacggaactgaccgatgcg
gtcaacgtcagccagttgaactcgctgtcgacctcgacctcaaccggcctgggatcgctg
tcaaccggcctgagttcgaccaacagcagcgtcaattcgctgtcgacatcgacctcgacc
ggcttgtcgaccaacaccagcagcatcaattcgctgtctactggcttgtcgagcaacacc
tcgaacgtcaactcactgtcgaccggtctgagttcaaccaacagtaacgtcaactcgctg
tcgacttccagctcgaccgggatcgcctctctgtcgacggggatttcttccctgtcgacc
gggctgagccaggtctcgtcgctgtcaaccggcttgagcaacatcaccaacggcgccaat
tcgctgtcgaccaccctgacttcgctggtggacgcctcgaagaacgccacggcgaccggc
gccacgctgggtggcaccaccatcggtggttccaacggcgacggcacggtgcagacgcgc
ggcaccaacggtaccgtcatcaataacgtgacggcggcaacttgcaccagcgtcaacggc
gtcgacgccaccggctccggcctgtgcgcgcaagcaaccaaggatggcgcaaccgcgatc
ggctcgaatgcgcaagcgaccgataccaataccacggcggtgggcttccgtgccctggcg
tcgcaagccggatcggtggcaatcggtaataacgcccgggcgaccggcgatccgaccgtg
gcgattggccagaatgcgctggcatcgggcaataactcggtcgcgatgggggcaaattcc
caggctaccgcggccaactcggtggccttgggggcaggttccgtggcagaccaggcgaac
acggtttccgtgggctcggtcggcaatgagcggcgcctgaccaatgtcgcgccgggtatc
aacccgaccgacggtgtcaatgtctcgcagctcaacaacgtgcagagccagttgggcaac
gtgcagcgcatcgcttactcgggtgtggccatgagcatggccatgtcaggcgcggtgatg
ccgaacctggaagcgggcgacaagggtgtgggtgtcggtcttggcacttatcaaggatat
ggggcgctggccttgcagttcaaggaaatcagcaagaccggtaacagtgcctggggcgct
ggtgcaagtacgaccggtaatgcgacgggcttcagtgttggttacggcttcaagtggaaa
taa
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integrated database retrieval system