Cellulosimicrobium protaetiae: FIC82_015875
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Entry
FIC82_015875 CDS
T08736
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cprt
Cellulosimicrobium protaetiae
Pathway
cprt03420
Nucleotide excision repair
cprt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cprt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIC82_015875
03430 Mismatch repair
FIC82_015875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cprt03400
]
FIC82_015875
Enzymes [BR:
cprt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIC82_015875
DNA repair and recombination proteins [BR:
cprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIC82_015875
MMR (mismatch excision repair)
Other MMR factors
FIC82_015875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
TPR_21
Motif
Other DBs
NCBI-ProteinID:
QJW38549
UniProt:
A0A6M5UNR8
LinkDB
All DBs
Position
complement(3678108..3681671)
Genome browser
AA seq
1187 aa
AA seq
DB search
MVAADGVPVESTARLAGAVEPSRPTLSATQIADLLGRPRPTPEQVEVIEAPLEPTLVVAG
AGSGKTETMAARVVWLIANELVPPDAVLGLTFTRKAAGELAERVQVRLAQLARARGGASS
ALSLLDRPTVATYNAYAASLVGDHGLRVGVEPGARLLGEAQQWQLASEVVEGWDDDLGTD
RALSTVVAAVLGLSGALGEHLLEPADARDRLAGIVEQLDALPLGPRQKARTKEVEKLVGD
VAERVRLLDVVAEYRRRKRATDSLDFGDQVALAARLAREVPVVGETERARFRVVLLDEYQ
DTSHAQVELLAGLFGGGHPVTAVGDPHQSIYGWRGASAGGLARFPERFPRAAGDRSAVRF
LSTSWRNDAAVLAAANVTAGPLRGGARPSSGDRVEVPPLALRPDAGPGRVSAHVAATAEE
EAAAVAELVAARWRPAGAPGGRATAAVLCRKRSQFAAVEVALRRRGLPVEVVGLGGLLTT
PEVVDVVALLEAVHDPSRGDALVRLLTGPRLHLGAADLHALGSRAADLARIEGALGARRR
SAGQGPDDGAAVVEGDVADHRSIVDALDDLPAPGEPAGDGRTLTAQGHARLSALARTLRA
LRGLTYLSLPELVVEAERALGLDVEAATNEALLASRRLVDPEAVSDRAREHLDAFRDVAA
TFTQTADVVTLGAFLAWLGVASSRENGLDLPVREPDPDAVQVITAHAAKGLEWDVVVVPG
LVDGVFPTTAQSSSGVRADSGWLTDVSQLPYPLRGDAADLPEFRFDLASDTKELVARRDE
FRAASGEHQLGEERRLAYVAFTRARRELYLTASWWQTGSRPRVLSPFLLELVESGVVGAD
GWSRPPGPDDTNPLEDVEVTGEWPASDDAPEGSARAVLRSTAAAVERAREARARRAVGGA
GIGAGSGAVPDHGAPSPTPSGSEPSSEPGSEPGGALDPVAGHAAGGPAGLTAPTGVLVDG
EGRDLVALARVLLAERAERSGREVELPAHVSASSLVRLAADRDEYALHLRRPVPVEPTVH
ARRGTRFHLWAERYFTTSSLLDVEDLPGADDEDLDPDADLDTLQRTFLASGWAGRTPLAV
EVDVETPVGATVLRSRIDAVFPELPEHAGGARDAVVVVDWKTGRAPTDAAARSVREVQLA
VYRLAWSRWTGLPLEKVNAAFYYVASDETVRPRRLLGEAEIEALIAG
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
ctggtcgcggccgacggggtcccggtcgagagcaccgcccgcctcgcgggggccgtcgag
ccgtcccgtccgacgttgtccgcgacgcagatcgccgacctgctcggtcgcccccggccg
accccggagcaggtcgaggtgatcgaggcgccgctcgagcccacgctcgtcgtcgccgga
gccggatccggcaagacggagacgatggcggcgcgcgtcgtctggctcatcgcgaacgag
ctcgtccccccggacgccgtgctcggcctgaccttcacgcgcaaggcggccggcgagctc
gccgagcgcgtccaggtacggctcgcgcagctcgcgcgcgcccgcggcggggcgtcgtcg
gccctgtcgctgctcgaccggccgacggtcgcgacctacaacgcctacgccgcgtcgctc
gtcggcgaccacggcctgcgcgtcggcgtcgagcccggtgcgcggctcctgggcgaggcg
cagcagtggcagctcgcgtccgaggtcgtcgagggctgggacgacgacctcggcaccgac
cgtgccctgagcaccgtcgtcgcggcggtgctcgggctgtcgggcgcgctcggcgagcac
ctgctcgagcccgccgacgcccgcgaccggctcgccggcatcgtcgagcagctcgacgcg
ctgccgctcggcccgcggcagaaggcccggaccaaggaggtcgagaagctcgtcggcgac
gtcgcggagcgcgtccggctgctcgacgtcgtcgcggagtaccggcgccgcaagcgcgcg
accgactccctcgacttcggcgaccaggtggcgctcgcggcccgcctcgcgcgcgaggtc
ccggtcgtgggggagacggagcgggcgcggttccgggtcgtcctgctcgacgagtaccag
gacacgtcgcacgcccaggtcgagctcctcgcggggctgttcggcggcgggcaccccgtg
acggccgtcggcgacccgcaccagtcgatctacggctggcgcggcgcgagcgcgggcggc
ctcgcccggttccccgagcggttcccgcgcgcggcgggcgaccggtcggccgtgcgcttc
ctgtcgacgtcgtggcgcaacgacgccgcggtgctcgccgcggcgaacgtcaccgcgggc
ccgctgcggggcggcgcccggccgagctccggcgaccgggtcgaggtgccgccgctcgcg
ctgcgcccggacgccgggccgggcagggtgtcggcgcacgtcgcggccaccgcggaggag
gaggcggctgcggtcgcggagctcgtcgcggcgcgctggcggccggcgggcgcgccgggc
gggcgcgccaccgccgcggtcctgtgccgcaagcgcagccagttcgcggcggtcgaggtc
gcgctgcgccgtcgcggactgcccgtggaggtcgtcgggctcggcggtctgctgacgacg
ccggaggtcgtcgacgtcgtcgcgctgctcgaggccgtgcacgacccctcgcgcggcgac
gcgctcgtccggctcctgaccgggccgcgtctccacctcggcgcggccgacctgcacgcg
ctggggagccgcgccgcggacctcgcgcgcatcgagggcgcgctcggcgcgcggcggcgg
agcgccgggcagggccccgacgacggtgccgcggtcgtcgagggcgacgtggccgaccac
cgctcgatcgtcgacgctctcgacgacctgcccgcgccgggcgagcccgcgggggacggg
cgcacgctcacggcgcagggccacgcccgcctgtcggcgctggcgcgcaccctgcgcgcg
ctgcgcgggctcacctacctctcgctgccggagctcgtcgtcgaggcggagcgcgcgctc
gggctcgacgtcgaggcggccacgaacgaggccctcctcgcgtcgcgccggctcgtcgac
ccggaggccgtgagcgaccgggcacgcgagcacctcgacgcgttccgggacgtcgccgcg
acgttcacccagacggccgacgtcgtgacgctcggcgcgttcctcgcctggctcggcgtc
gcctcgagcagggagaacgggctggacctcccggtgcgcgagcccgacccggacgccgtg
caggtcatcaccgcgcacgccgcgaagggcctcgagtgggacgtcgtcgtcgtccccggg
ctcgtcgacggcgtgttcccgacgacggcgcagtcgtcctcgggcgtgcgcgcggacagc
gggtggctcaccgacgtgagccagctcccgtacccgctgcgcggcgacgcggccgacctg
ccggagttccgcttcgacctcgcgtccgacaccaaggagctcgtggcgcggcgcgacgag
ttccgcgcggcgagcggcgagcaccagctcggggaggagcgccggctcgcgtacgtcgcg
ttcacccgggcgcgccgggagctgtacctcaccgcgtcgtggtggcagacgggctcgcgc
ccgcgcgtgctctcgccgttcctcctggagctcgtcgagtccggggtcgtcggcgcggac
ggctggtcccggccgccaggccccgacgacacgaacccgctcgaggacgtcgaggtcacc
ggcgagtggcccgcgtccgacgacgcgcccgaggggtcggcgcgtgcggtcctgcgcagc
accgcggcggccgtcgagcgggcccgcgaggcgcgtgcccggcgtgccgtcggcggggcg
ggcatcggcgcgggtagtggtgccgtccccgaccacggcgcccccagcccgacaccttcc
ggcagcgagccgagcagcgagcccggcagcgagcccggcggggcgctcgacccggtggcc
ggccatgccgcgggcggacctgccgggctcaccgcgcccaccggcgtgctggtcgacggc
gagggtcgtgacctcgtcgcgctcgcccgggtcctgctcgcggagcgggccgagcggtcg
ggccgggaggtcgagctcccggcgcacgtctcggcgtcgagcctcgtgcggctcgcggcc
gaccgtgacgagtacgcgctgcacctgcggcgcccggtcccggtcgagcccacggtgcac
gcgcgccggggcacgaggttccacctgtgggccgagcgctacttcacgacgtcctcgctc
ctggacgtcgaggacctgcccggcgcggacgacgaggacctcgacccggacgcggacctc
gacacgctccagcgcacgttcctcgcttccgggtgggccggccgcacgcctctcgccgtc
gaggtcgacgtcgagacccccgtcggggcgacggtcctgcgctcgcgcatcgacgcggtg
ttccccgagctgccggagcacgcaggcggggcccgggacgccgtcgtggtggtcgactgg
aagacgggccgcgcgccgaccgacgccgccgcgcgcagcgtgcgcgaggtgcagctcgcg
gtctaccggctcgcgtggtcgcgatggaccggactgccgctcgagaaggtcaacgccgcg
ttctactacgtcgcgtccgacgagaccgtgcggccgcgccggctgctgggcgaggcggag
atcgaggcgctgatcgcggggtga
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