Colwellia psychrerythraea: CPS_4366
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Entry
CPS_4366 CDS
T00258
Symbol
priA
Name
(RefSeq) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPS_4366 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_4366 (priA)
Enzymes [BR:
cps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPS_4366 (priA)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPS_4366 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_19
AAA_22
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AAZ24207
UniProt:
Q47W07
LinkDB
All DBs
Position
4597556..4599766
Genome browser
AA seq
736 aa
AA seq
DB search
MPEQYIQVAIPVPMRQLFTYRVPEALSSPAIKVGERVAVSFGPRKVIGIVIDAQAQCDFE
ISKVKDITTRLNDNFNLSQSLVSFLQLCAHYYHHPVGDVFQQALPILLRKIENITLSPPM
VWQAQCPSEDNSDLLAKLEKKAAKQFALYQIINNHNGISWVELRTLGYSKAQLNALQSKA
LIIEKEQVASQYTWQENTLNQADRLVLSSEQAIIVSAINHSLAQFSCHLIDGVTGSGKTE
VYLQSMEEVLANNQQVLVIVPEIGLTPQTLNRFEQRFNVPIALHHSGLNDKERLATWLSA
QQGSAAIVIGTRSAVFTPLHRLGLIIIDEEHDSSLKQQDSFRYHCRDMAILRARQLNIPI
VLGTATPSFESLQNALSGKYSYHQLLNRAGKSNKAKIALIDMNQQQVEFGLSGTLKHEMK
QTLARGEQVLLFLNRRGYAPAINCQECHWLAECQRCDKPYTLHQKQQLLICHHCGSQKRI
PPQCPSCGSVRIAPLGQGTEQLESRLEELFPESSIVRIDRDSTRKKGELAKLLQEVTDKK
HQLLVGTQMLAKGHHFPDVTLVAVLDVDGALFSFDFRASEQMAQLLIQVAGRAGRASKPG
KVLVQSNFVDHPLLQDLVHNGYHHFAHQALTERKQALLPPFTFQALLRADANYPSYPEKF
LRALTQRRLEGCEFAGPVPAAMEKKAGKFRYHLIIQAKSRKDLHRAILQLLIQIPNNEWQ
GKVRWSLDIDPIDLNW
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaacaatacattcaagttgcgattcctgttcctatgcgacagttatttacttat
cgagtaccagaagcgctaagttcccctgctattaaagtcggtgaacgcgttgcggtatct
tttggtccacgaaaggtgattggtatcgttattgatgcacaagcacaatgtgactttgag
ataagtaaggtaaaagacattactactcgtcttaatgataatttcaacttaagtcagtca
ctggttagttttttacaattatgtgctcattattaccaccaccccgttggcgatgttttc
caacaagccttgcctattttgcttcgaaaaatagaaaatattaccttaagccctccgatg
gtatggcaagcacaatgcccaagtgaagataacagtgacctattagccaaattagagaaa
aaagccgctaagcaattcgctctttatcaaataattaacaaccataacggcatcagttgg
gtagagctgcgcacattgggatatagcaaagcacagttaaacgctttgcagagcaaagcg
ttaatcattgagaaagaacaggtagcgagccaatatacttggcaagagaataccctcaat
caagctgacaggttagtactttcaagtgaacaagccattattgttagtgctataaaccat
tctttagcacaattttcgtgccatctaattgatggggttacggggagtggtaaaacagaa
gtctacttgcaatccatggaagaagtacttgccaataatcagcaagtattagtgatagtg
ccagagattggcttaacaccccaaacattaaaccgctttgaacaacgctttaatgtgcct
attgcgttgcaccattcagggctgaatgataaagaacgtttagccacctggttaagtgct
caacaaggaagtgccgctattgttattggtactcgttcagcagtttttacgcccttacat
cgccttggattgatcattatcgatgaagagcatgattcttcattaaaacaacaagatagt
tttcgctaccattgccgagacatggctattttacgcgcaaggcaattaaatattccaatc
gttttaggcaccgctacgcctagttttgagtctttgcaaaatgcgttatctggaaaatat
agctaccaccaacttcttaaccgagcaggtaaaagtaataaagctaaaatagcccttatt
gatatgaaccagcagcaagtcgagtttggtttatctggcacacttaaacatgaaatgaag
caaaccttagcccgtggtgaacaagtattattatttttaaaccgtcgaggttatgcgcca
gctataaactgccaagagtgccattggcttgcagaatgtcaacgctgtgataaaccttat
accttacaccaaaagcaacaactgctgatttgtcatcattgtggcagtcaaaagcgcata
cctccgcagtgtcctagttgcggtagtgttcgtatagcgccactaggccagggcacagag
caattagagtctcgtttagaagaactatttcctgaaagttctattgtgcgtatcgatcga
gatagcactcgtaaaaaaggtgaattagcaaaattattacaagaggtcactgataaaaaa
catcaattactggttggaacacaaatgttagcaaaaggacaccattttcctgatgtcacg
ctagtagctgtgctcgatgttgatggtgctttatttagttttgattttcgcgcaagtgag
caaatggctcaattgctgattcaggtagcaggacgcgctggacgtgccagtaaacccggg
aaagtattagtgcaaagtaactttgttgatcatcctttgttgcaagatttagtacacaat
ggttatcaccattttgcccaccaagcactcactgagcgaaaacaagcactattaccacct
tttacttttcaagcgctgttacgagctgatgcgaattatccatcttacccagaaaaattt
ttacgcgctttaacacaacgacgactagagggctgtgagtttgccggcccagttccagcg
gcaatggaaaaaaaagcaggtaaatttagatatcacttgatcattcaagcgaaatcacga
aaagatttacatcgcgcaattttgcagttacttattcaaatacctaacaatgaatggcag
ggtaaggttcgttggagtttagatattgatcctatcgatcttaattggtaa
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