Corynebacterium pseudogenitalium: KBP54_01085
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Entry
KBP54_01085 CDS
T08714
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cpsl
Corynebacterium pseudogenitalium
Pathway
cpsl00521
Streptomycin biosynthesis
cpsl00523
Polyketide sugar unit biosynthesis
cpsl00541
O-Antigen nucleotide sugar biosynthesis
cpsl01100
Metabolic pathways
cpsl01110
Biosynthesis of secondary metabolites
cpsl01250
Biosynthesis of nucleotide sugars
Module
cpsl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpsl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KBP54_01085 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KBP54_01085 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KBP54_01085 (rfbD)
Enzymes [BR:
cpsl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
KBP54_01085 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KBP54_01085 (rfbD)
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GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
UUA87479
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All DBs
Position
complement(247877..249169)
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AA seq
430 aa
AA seq
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MIAGLEVHELAVHRDNRGWFKENWAGQKLVPVQQNVSFNARRGATRGMHAEPWDKWVSVA
SGRVFGAWVDMREGSATFGETFSCEIGPETAVFVPRGVANGFQALEDDTTYIYLVNERYQ
PGARYAYCSYKEVEWPLEPTELSEADLTHPMLVDATPVPQRKILVTGANGQLGRALQELY
GPDEAEFCRRDQLDITNLEGVDWSKYWAVINCAAYNDVNGAEDDPAGAWRVNAEAPAQLA
RVANEHDLVLVHVSSDYIFDGTHEVHTEDELPSPLSRYGASKAAGETAAQVARKHYVVRT
SWVFGDGANFMATMRSLAEAGAKPRVVKDQRGRPTSAEDLAKGIRHLLANEAAYGVYNIT
SDGDSVGRDEIAMAVFIGMGKDPAQVHPVTSEEYEDKAPRPAESTLALDKIKATGFAPMN
WRAALALYLG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgggttggaagtccacgagcttgcggtgcaccgcgataaccgcggctggttc
aaggaaaactgggctggacagaagctggtgccggtgcaacagaatgtgagcttcaacgcg
cggcgcggggcgactcgcggcatgcacgcggagccgtgggataagtgggtgtcggtggcg
tcgggccgcgtgtttggggcgtgggtggacatgcgcgagggctcagcgacgttcggggag
acgttcagctgcgagatcggcccggagacggcggtgttcgtgccgcgcggggtggccaac
ggcttccaggcgctcgaggacgacacgacgtacatttacctggtcaacgagcgctaccag
cccggcgcgcgctacgcctactgctcctacaaagaggtcgagtggccgctggagcccacg
gagctttcggaggccgacctcactcaccccatgcttgtcgacgccaccccagtcccccag
cgcaaaatccttgtgacgggcgcgaacgggcagctgggccgggcgctgcaggaactgtac
gggccggatgaggcggagttctgcaggcgggaccagctggacatcacgaacctggagggc
gtggactggtcgaagtattgggcggtgatcaactgcgcggcgtacaacgacgtcaatggc
gcagaggatgacccggcgggcgcgtggcgtgtgaacgcggaggccccggcgcagctggcg
cgggtggccaatgagcacgacttggtgttggtgcacgtgtccagcgactacatcttcgac
ggcacgcacgaggtgcacacggaagacgagctgccgagcccgctgagccgctacggggcg
tcgaaggctgccggggagacggcggcgcaggtggcgcgcaagcactacgtggtgcgcacg
tcgtgggtgttcggggacggggcgaactttatggcgacgatgcgctccctcgcggaggcc
ggcgcaaagccgcgggtggtgaaggaccagcgcgggcggccgacgtcggcggaggacctg
gcgaagggcatccgccacctgctcgccaacgaggctgcgtacggggtgtacaacatcacc
tcggatggggattcggtgggccgcgacgagatcgcaatggcggtgttcatcgggatgggc
aaggaccccgcacaggtacacccggtgacttcggaggagtacgaggacaaggcgccacgg
cctgcggaatcgacgctggcgctggacaagatcaaggcgacgggctttgcccccatgaac
tggagagctgcgttggcgctctatcttgggtag
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