Corynebacterium pseudogenitalium: KBP54_10510
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Entry
KBP54_10510 CDS
T08714
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cpsl
Corynebacterium pseudogenitalium
Pathway
cpsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBP54_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsl03400
]
KBP54_10510
Enzymes [BR:
cpsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KBP54_10510
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KBP54_10510
DNA repair and recombination proteins [BR:
cpsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KBP54_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DUF4429
Motif
Other DBs
NCBI-ProteinID:
UUA87160
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Position
2224788..2225582
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AA seq
264 aa
AA seq
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MPEGHVIHRLARHLNDTFAGQPIEISSPQGRFDVSPLAGATLTEARAVGKHLFLEFSTAT
VHVHLGLIGSFRFEPAEDVWGQIRLRLANEDVAANLRGPQYCRYVSPPEEQVILDRSGED
PLDPDADPEALWERVRASRRTIGSLMMDQQYFAGVGNIYRAEPLFRLGISPFVPGRALDH
EAFLRLWQDVRELMEYGVEHGRIDTVRPEHSPEAMDRPPRKDDHGGEVYVYRRAGEPCFV
CGTPIEVRKYEGRNLFWCPSCQAE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggccacgtcatccaccgcctcgcccgccacttgaacgacacgtttgcgggg
cagcccatcgagatttcctccccgcaaggacgtttcgacgtctccccgctcgctggcgcc
accctgacggaggcccgcgcggtgggcaagcacctgttcctggagttctccacggcgacg
gtgcatgtgcacctgggcctgattggttccttccgtttcgaaccggcggaggacgtgtgg
ggccagatccggctgcggctggccaacgaggacgtggcggcgaacctgcgcggcccgcag
tactgccgctacgtctccccaccggaggagcaggtgattctggaccgcagcggcgaagac
ccccttgacccggacgcggacccggaggcgctgtgggagagggtgcgggcgtcgagacgc
acgattgggtcattgatgatggaccagcagtacttcgcgggcgtgggcaatatataccgt
gcggagccgctgttccgcctgggtatttccccgttcgtgccgggccgcgcgttggaccac
gaggcgttcctgcgcctgtggcaggacgtgcgcgagctgatggagtacggggtggagcac
ggccggatagatactgtgcgccccgagcacagccccgaggcgatggacagaccaccccgg
aaggacgaccacggcggtgaggtctacgtgtaccgccgcgccggcgagccctgctttgtt
tgtggcacaccaatcgaggtgcgcaagtacgagggccgcaatttgttctggtgcccctcc
tgccaggcggaatag
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