Corynebacterium pseudodiphtheriticum: L9H27_04885
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Entry
L9H27_04885 CDS
T08839
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Pathway
cpsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L9H27_04885 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsp03400
]
L9H27_04885 (uvrB)
DNA repair and recombination proteins [BR:
cpsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L9H27_04885 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L9H27_04885 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
Helicase_RecD
nSTAND3
AIG1
DUF87
DUF6716
AAA_30
UvrD-helicase
HEM4
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
UQV57057
LinkDB
All DBs
Position
1086569..1088674
Genome browser
AA seq
701 aa
AA seq
DB search
MAFAAEYPVLSESEHRPVGAIERRKKTFEVVSEYQPAGDQPTAIKELDRRLKEGESDVVL
LGATGTGKSATAAWLIEQQQRPTLVMAPNKTLAAQLANELRQLLPHNAVEYFVSYYDYYQ
PEAYVAQTDTYIEKDSSINEDVERLRHSATSALLSRRDVVVVSSVSCIYGLGTPQSYLDR
SVVMKVDDEVERDRFLRLLVDIQYERNDVGFTRGAFRVNGDTVDIIPAYEERAVRIEFFG
DDIDALYYIHPLTGDILEQVDEVRIFPATHYVAGPERMEKAIADIKEELQQRLTELENRG
KLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHIDGREAGSAPATLMDYFPEDFLTIID
ESHVTVPQIGGMFEGDMSRKRNLVDFGFRLPSALDNRPLTFDEFEKRVGQTVYLSATPGD
YEITAAGGEYVEQVIRPTGLVDPKVTVKPTKGQIDDLIDEVKTRTAKNERVLVTTLTKRM
AEDLTDYLLEHGVKVRYLHSDIDTLQRVELLRQLRLGEFDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSTTSLIQTIGRAARNVSGEVIMYADRITESMNNAIEETERRREKQIAY
NKEHGIDPQPLRKKIADILDQVYESGDDGEAANNSESGDAALVDKPDVSSMAEGEIQTLI
DDLTKQMKVAARDLKFELAGRLRDEIADLKKELRGVKEAGI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgctgctgagtaccctgttttatctgaatccgaacaccgcccagtcggcgca
atcgagcgccggaaaaagaccttcgaggtcgtttccgagtaccaaccggccggtgaccag
ccaacagcaattaaagaactcgatcggcgcctgaaagaaggcgaatccgacgtcgtccta
ctcggcgccaccggtactggtaaatccgccaccgcagcctggctgattgaacaacagcag
cgtcccacgctagtcatggcaccgaacaaaactctcgcggcgcagctagccaacgaatta
cgacagcttctcccgcacaacgcggtggaatacttcgtctcgtactacgactactaccag
ccggaagcctacgtcgcgcagacagacacctatatcgaaaaagactcctcaatcaacgag
gacgtcgaacgcctgcgccactccgcgacctccgcgctgctatcacgccgcgacgtcgtc
gtggtctcttccgtctcgtgcatttatggtctgggaaccccacagtcctacctggaccgc
tccgtcgtcatgaaggtcgatgacgaagtagagcgtgaccgcttcctgcgcctactggtc
gatattcaatacgaacgcaatgacgtcggatttacccgcggtgccttccgcgtcaacggc
gataccgtcgatatcatcccggcctatgaagaacgcgctgtgcgaatcgaatttttcgga
gacgacatcgacgcgctgtactatatccaccctttgaccggcgacatcctggaacaagtc
gacgaggtccgtatcttcccagccacacattacgtcgcggggccagaacgcatggaaaaa
gccattgcggacatcaaagaggagctgcaacagcgtcttacagaattggaaaatcgcggc
aagcttctcgaagcccaacggttacgcatgcgcaccgaatacgacctggaaatgatcgaa
caagtcggtttctgctccgggatcgagaactattcgcgccatatcgacgggcgagaggct
ggcagcgcgccagcaacattgatggattatttcccagaagacttcctcacgatcatcgac
gagtcacacgtgaccgtccctcagatcgggggcatgttcgaaggcgatatgtcgcgcaaa
cggaacttagtagatttcggtttccgtttaccctccgctctggataaccgcccgctgact
ttcgacgaatttgaaaaacgcgtcggccagactgtctatctctctgccaccccgggtgac
tacgaaatcaccgccgccggtggtgaatacgtagagcaggtcattcgtccgacgggtctg
gtggacccgaaggtcaccgtgaaaccaaccaaaggccagatcgatgatcttatcgatgag
gtcaaaacgcgcacggcaaagaatgagcgcgtgctggtgaccacgctgaccaaacgcatg
gccgaagaccttaccgattacttgttggaacacggtgtcaaggttcgctacttgcactcc
gacattgacaccttgcaacgtgtggaattgctgcggcagttgcggttgggtgaattcgat
gtgctcgtcggcatcaacctgttgcgtgagggcttggacctgccagaagtttccctggtg
gcgattttggatgcagacaaagaaggctttttgcgttcgacgacgtcgctgattcaaacg
attggtcgtgccgcccgtaacgtctcaggtgaagtgatcatgtacgccgaccggatcacg
gaatcgatgaacaacgcgatcgaagaaaccgaacgccgccgggaaaagcagatcgcctac
aacaaggaacacggcatcgacccgcagccactgcggaaaaagatcgcggatatcctggac
caagtttacgaatctggtgatgacggggaagcggcaaataactcggaatccggagatgcg
gcgctcgtcgacaagccagacgtgtcatccatggcagaaggcgagatccaaactcttatc
gacgatctgacgaagcaaatgaaggttgccgcccgggatctcaagttcgagttggcaggc
cgattgcgtgatgagatcgcggatctgaaaaaggaactgcgcggagtgaaagaagctggt
atataa
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